RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 EFHC1Q5JVL4 640 aa12.58□□□□□ -0.4
PDLIM5-220ENST00000514830 PPP1R15BQ5SWA1 713 aa12.58□□□□□ -0.4
PDLIM5-220ENST00000514830 SDHAF4Q5VUM1 108 aa12.58□□□□□ -0.4
PDLIM5-220ENST00000514830 FAM183BPQ6ZVS7 135 aa12.58□□□□□ -0.4
PDLIM5-220ENST00000514830 TMC8Q8IU68 726 aa12.58□□□□□ -0.4
PDLIM5-220ENST00000514830 SCUBE3Q8IX30 993 aa12.58□□□□□ -0.4
PDLIM5-220ENST00000514830 NUP210Q8TEM1 1887 aaPredicted RBP12.58□□□□□ -0.4
PDLIM5-220ENST00000514830 GIPC2Q8TF65 315 aa12.58□□□□□ -0.4
PDLIM5-220ENST00000514830 KHSRPQ92945 711 aaKnown RBP eCLIP12.58□□□□□ -0.41e-6■■■■□ 20.4
PDLIM5-220ENST00000514830 CALR3Q96L12 384 aaKnown RBP12.58□□□□□ -0.4
PDLIM5-220ENST00000514830 SLITRK1Q96PX8 696 aa12.58□□□□□ -0.4
PDLIM5-220ENST00000514830 C11orf70Q9BRQ4 267 aa12.58□□□□□ -0.4
PDLIM5-220ENST00000514830 ULBP1Q9BZM6 244 aa12.58□□□□□ -0.4
PDLIM5-220ENST00000514830 SYNCQ9H7C4 482 aa12.58□□□□□ -0.4
PDLIM5-220ENST00000514830 IL21Q9HBE4 155 aa12.58□□□□□ -0.4
PDLIM5-220ENST00000514830 PARVAQ9NVD7 372 aa12.58□□□□□ -0.4
PDLIM5-220ENST00000514830 CLIC5Q9NZA1 410 aa12.58□□□□□ -0.4
PDLIM5-220ENST00000514830 CLEC1BQ9P126 229 aa12.58□□□□□ -0.4
PDLIM5-220ENST00000514830 ZMYM5Q9UJ78 669 aa12.58□□□□□ -0.4
PDLIM5-220ENST00000514830 SCINQ9Y6U3 715 aa12.58□□□□□ -0.4
PDLIM5-220ENST00000514830 CCDC195A0A1B0GUA6 201 aa12.57□□□□□ -0.4
PDLIM5-220ENST00000514830 SIGLEC16A6NMB1 481 aa12.57□□□□□ -0.4
PDLIM5-220ENST00000514830 LINC01565O15544 149 aa12.57□□□□□ -0.4
PDLIM5-220ENST00000514830 HSF2BPO75031 334 aa12.57□□□□□ -0.4
PDLIM5-220ENST00000514830 RFPL2O75678 378 aa12.57□□□□□ -0.4
PDLIM5-220ENST00000514830 MTA2O94776 668 aa12.57□□□□□ -0.4
PDLIM5-220ENST00000514830 LCP1P13796 627 aa12.57□□□□□ -0.4
PDLIM5-220ENST00000514830 RRM1P23921 792 aa12.57□□□□□ -0.4
PDLIM5-220ENST00000514830 LTBRP36941 435 aa12.57□□□□□ -0.4
PDLIM5-220ENST00000514830 PLA2G5P39877 138 aa12.57□□□□□ -0.4
PDLIM5-220ENST00000514830 TUBP50607 506 aa12.57□□□□□ -0.4
PDLIM5-220ENST00000514830 CDR1P51861 262 aa12.57□□□□□ -0.4
PDLIM5-220ENST00000514830 HADHBP55084 474 aaKnown RBP12.57□□□□□ -0.4
PDLIM5-220ENST00000514830 MTMR3Q13615 1198 aa12.57□□□□□ -0.4
PDLIM5-220ENST00000514830 LLGL2Q6P1M3 1020 aa12.57□□□□□ -0.4
PDLIM5-220ENST00000514830 SYCE2Q6PIF2 218 aa12.57□□□□□ -0.4
PDLIM5-220ENST00000514830 GPR149Q86SP6 731 aa12.57□□□□□ -0.4
PDLIM5-220ENST00000514830 CTNNBL1Q8WYA6 563 aaPredicted RBP12.57□□□□□ -0.4
PDLIM5-220ENST00000514830 MSLNLQ96KJ4 702 aa12.57□□□□□ -0.4
PDLIM5-220ENST00000514830 SLC2A13Q96QE2 648 aa12.57□□□□□ -0.4
PDLIM5-220ENST00000514830 THAP2Q9H0W7 228 aa12.57□□□□□ -0.4
PDLIM5-220ENST00000514830 IGFLR1Q9H665 355 aa12.57□□□□□ -0.4
PDLIM5-220ENST00000514830 MRPL47Q9HD33 250 aaKnown RBP12.57□□□□□ -0.4
PDLIM5-220ENST00000514830 TLR8Q9NR97 1041 aaKnown RBP12.57□□□□□ -0.4
PDLIM5-220ENST00000514830 KCND1Q9NSA2 647 aa12.57□□□□□ -0.4
PDLIM5-220ENST00000514830 TMEM51Q9NW97 253 aa12.57□□□□□ -0.4
PDLIM5-220ENST00000514830 UVRAGQ9P2Y5 699 aa12.57□□□□□ -0.4
PDLIM5-220ENST00000514830 TJP2Q9UDY2 1190 aa12.57□□□□□ -0.4
PDLIM5-220ENST00000514830 LCMT1Q9UIC8 334 aa12.57□□□□□ -0.4
PDLIM5-220ENST00000514830 TMEM59LQ9UK28 342 aa12.57□□□□□ -0.4
PDLIM5-220ENST00000514830 HCN4Q9Y3Q4 1203 aa12.57□□□□□ -0.4
PDLIM5-220ENST00000514830 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.56□□□□□ -0.4
PDLIM5-220ENST00000514830 YJEFN3A6XGL0 299 aa12.56□□□□□ -0.4
PDLIM5-220ENST00000514830 TMCO5BA8MYB1 307 aa12.56□□□□□ -0.4
PDLIM5-220ENST00000514830 E7ENQ6 273 aa12.56□□□□□ -0.4
PDLIM5-220ENST00000514830 TBX10O75333 385 aa12.56□□□□□ -0.4
PDLIM5-220ENST00000514830 LTFP02788 710 aa12.56□□□□□ -0.4
PDLIM5-220ENST00000514830 F11P03951 625 aa12.56□□□□□ -0.4
PDLIM5-220ENST00000514830 CCDC175P0C221 793 aa12.56□□□□□ -0.4
PDLIM5-220ENST00000514830 USP17L7P0C7H9 530 aa12.56□□□□□ -0.4
PDLIM5-220ENST00000514830 CDC25CP30307 473 aa12.56□□□□□ -0.4
PDLIM5-220ENST00000514830 YWHAZP63104 245 aaKnown RBP12.56□□□□□ -0.4
PDLIM5-220ENST00000514830 RBM10P98175 930 aaKnown RBP12.56□□□□□ -0.4
PDLIM5-220ENST00000514830 TAF10Q12962 218 aa12.56□□□□□ -0.4
PDLIM5-220ENST00000514830 MAMLD1Q13495 774 aa12.56□□□□□ -0.4
PDLIM5-220ENST00000514830 TAF12Q16514 161 aa12.56□□□□□ -0.4
PDLIM5-220ENST00000514830 CYP4A22Q5TCH4 519 aa12.56□□□□□ -0.4
PDLIM5-220ENST00000514830 OR6B2Q6IFH4 312 aa12.56□□□□□ -0.4
PDLIM5-220ENST00000514830 KLHDC10Q6PID8 442 aa12.56□□□□□ -0.4
PDLIM5-220ENST00000514830 SCD5Q86SK9 330 aa12.56□□□□□ -0.4
PDLIM5-220ENST00000514830 TMEM150AQ86TG1 271 aa12.56□□□□□ -0.4
PDLIM5-220ENST00000514830 RHOT2Q8IXI1 618 aa12.56□□□□□ -0.4
PDLIM5-220ENST00000514830 MICALL1Q8N3F8 863 aa12.56□□□□□ -0.4
PDLIM5-220ENST00000514830 GPR152Q8TDT2 470 aa12.56□□□□□ -0.4
PDLIM5-220ENST00000514830 FNIP1Q8TF40 1166 aa12.56□□□□□ -0.4
PDLIM5-220ENST00000514830 FBXO32Q969P5 355 aa12.56□□□□□ -0.4
PDLIM5-220ENST00000514830 ZNF653Q96CK0 615 aa12.56□□□□□ -0.4
PDLIM5-220ENST00000514830 CDK5RAP1Q96SZ6 601 aaKnown RBP12.56□□□□□ -0.4
PDLIM5-220ENST00000514830 PACSIN1Q9BY11 444 aa12.56□□□□□ -0.4
PDLIM5-220ENST00000514830 S1PR5Q9H228 398 aa12.56□□□□□ -0.4
PDLIM5-220ENST00000514830 ADAM7Q9H2U9 754 aa12.56□□□□□ -0.4
PDLIM5-220ENST00000514830 POPDC2Q9HBU9 364 aa12.56□□□□□ -0.4
PDLIM5-220ENST00000514830 ZNF334Q9HCZ1 680 aaPredicted RBP12.56□□□□□ -0.4
PDLIM5-220ENST00000514830 ASAH2Q9NR71 780 aa12.56□□□□□ -0.4
PDLIM5-220ENST00000514830 ABCC13Q9NSE7 274 aa12.56□□□□□ -0.4
PDLIM5-220ENST00000514830 RRN3Q9NYV6 651 aa12.56□□□□□ -0.4
PDLIM5-220ENST00000514830 CNOT8Q9UFF9 292 aaKnown RBP12.56□□□□□ -0.4
PDLIM5-220ENST00000514830 CLUHO75153 1309 aa12.56□□□□□ -0.4
PDLIM5-220ENST00000514830 ZNF840PA6NDX5 716 aa12.55□□□□□ -0.4
PDLIM5-220ENST00000514830 ZNF197O14709 1029 aa12.55□□□□□ -0.4
PDLIM5-220ENST00000514830 CCL16O15467 120 aa12.55□□□□□ -0.4
PDLIM5-220ENST00000514830 TADA3O75528 432 aa12.55□□□□□ -0.4
PDLIM5-220ENST00000514830 DAB1O75553 588 aa12.55□□□□□ -0.4
PDLIM5-220ENST00000514830 FYNP06241 537 aa12.55□□□□□ -0.4
PDLIM5-220ENST00000514830 KRT3P12035 628 aa12.55□□□□□ -0.4
PDLIM5-220ENST00000514830 DDX6P26196 483 aaKnown RBP eCLIP12.55□□□□□ -0.4
PDLIM5-220ENST00000514830 WEE1P30291 646 aa12.55□□□□□ -0.4
PDLIM5-220ENST00000514830 YWHAGP61981 247 aaKnown RBP eCLIP12.55□□□□□ -0.4
PDLIM5-220ENST00000514830 C2CD6Q53TS8 623 aa12.55□□□□□ -0.4
PDLIM5-220ENST00000514830 PRSS36Q5K4E3 855 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms