RNA–Protein interactions for RNA: ENST00000514755.5

UBE2D3-232, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-232ENST00000514755 PATJQ8NI35 1801 aa11.66□□□□□ -0.54
UBE2D3-232ENST00000514755 HHLA1C9JL84 531 aa11.66□□□□□ -0.54
UBE2D3-232ENST00000514755 GOLGA6L22H0YM25 854 aa11.66□□□□□ -0.54
UBE2D3-232ENST00000514755 RNF225M0QZC1 329 aaPredicted RBP11.66□□□□□ -0.54
UBE2D3-232ENST00000514755 P4HA2O15460 535 aa11.66□□□□□ -0.54
UBE2D3-232ENST00000514755 LZTS3O60299 673 aaPredicted RBP11.66□□□□□ -0.54
UBE2D3-232ENST00000514755 AVPP01185 164 aa11.66□□□□□ -0.54
UBE2D3-232ENST00000514755 CALCAP01258 141 aa11.66□□□□□ -0.54
UBE2D3-232ENST00000514755 AFPP02771 609 aaKnown RBP11.66□□□□□ -0.54
UBE2D3-232ENST00000514755 FAM200BP0CF97 657 aa11.66□□□□□ -0.54
UBE2D3-232ENST00000514755 CCDC192P0DO97 292 aa11.66□□□□□ -0.54
UBE2D3-232ENST00000514755 ACO1P21399 889 aaKnown RBP11.66□□□□□ -0.54
UBE2D3-232ENST00000514755 WEE1P30291 646 aa11.66□□□□□ -0.54
UBE2D3-232ENST00000514755 APBA1Q02410 837 aa11.66□□□□□ -0.54
UBE2D3-232ENST00000514755 FCHO2Q0JRZ9 810 aa11.66□□□□□ -0.54
UBE2D3-232ENST00000514755 MLF2Q15773 248 aaPredicted RBP11.66□□□□□ -0.54
UBE2D3-232ENST00000514755 RRAGAQ7L523 313 aa11.66□□□□□ -0.54
UBE2D3-232ENST00000514755 TTC8Q8TAM2 541 aa11.66□□□□□ -0.54
UBE2D3-232ENST00000514755 DEPDC1BQ8WUY9 529 aa11.66□□□□□ -0.54
UBE2D3-232ENST00000514755 FAXDC2Q96IV6 333 aa11.66□□□□□ -0.54
UBE2D3-232ENST00000514755 HEXIM2Q96MH2 286 aaKnown RBP11.66□□□□□ -0.54
UBE2D3-232ENST00000514755 FOXQ1Q9C009 403 aa11.66□□□□□ -0.54
UBE2D3-232ENST00000514755 RNF38Q9H0F5 515 aa11.66□□□□□ -0.54
UBE2D3-232ENST00000514755 BRD9Q9H8M2 597 aa11.66□□□□□ -0.54
UBE2D3-232ENST00000514755 TBC1D17Q9HA65 648 aa11.66□□□□□ -0.54
UBE2D3-232ENST00000514755 SAMSN1Q9NSI8 373 aaKnown RBP11.66□□□□□ -0.54
UBE2D3-232ENST00000514755 PGPEP1Q9NXJ5 209 aa11.66□□□□□ -0.54
UBE2D3-232ENST00000514755 TMEM63CQ9P1W3 806 aa11.66□□□□□ -0.54
UBE2D3-232ENST00000514755 CHORDC1Q9UHD1 332 aaPredicted RBP11.66□□□□□ -0.54
UBE2D3-232ENST00000514755 MTF2Q9Y483 593 aaPredicted RBP11.66□□□□□ -0.54
UBE2D3-232ENST00000514755 ATP8B3O60423 1300 aa11.65□□□□□ -0.54
UBE2D3-232ENST00000514755 ZNF840PA6NDX5 716 aa11.65□□□□□ -0.54
UBE2D3-232ENST00000514755 FAM187AA6NFU0 413 aa11.65□□□□□ -0.54
UBE2D3-232ENST00000514755 TULP2O00295 520 aa11.65□□□□□ -0.54
UBE2D3-232ENST00000514755 ZNF263O14978 683 aa11.65□□□□□ -0.54
UBE2D3-232ENST00000514755 FGFR1OPO95684 399 aaKnown RBP11.65□□□□□ -0.54
UBE2D3-232ENST00000514755 SLC9A1P19634 815 aa11.65□□□□□ -0.54
UBE2D3-232ENST00000514755 AOC1P19801 751 aa11.65□□□□□ -0.54
UBE2D3-232ENST00000514755 DDX6P26196 483 aaKnown RBP eCLIP11.65□□□□□ -0.543e-8■□□□□ 10.6
UBE2D3-232ENST00000514755 YWHAQP27348 245 aa11.65□□□□□ -0.54
UBE2D3-232ENST00000514755 ERCC5P28715 1186 aaPredicted RBP11.65□□□□□ -0.54
UBE2D3-232ENST00000514755 AVPR1AP37288 418 aa11.65□□□□□ -0.54
UBE2D3-232ENST00000514755 SOX9P48436 509 aa11.65□□□□□ -0.54
UBE2D3-232ENST00000514755 STARD6P59095 220 aa11.65□□□□□ -0.54
UBE2D3-232ENST00000514755 TRIM68Q6AZZ1 485 aa11.65□□□□□ -0.54
UBE2D3-232ENST00000514755 PHLDB3Q6NSJ2 640 aa11.65□□□□□ -0.54
UBE2D3-232ENST00000514755 GJB7Q6PEY0 223 aa11.65□□□□□ -0.54
UBE2D3-232ENST00000514755 TPRG1Q6ZUI0 275 aa11.65□□□□□ -0.54
UBE2D3-232ENST00000514755 C11orf57Q6ZUT1 292 aaPredicted RBP11.65□□□□□ -0.54
UBE2D3-232ENST00000514755 PPM1KQ8N3J5 372 aa11.65□□□□□ -0.54
UBE2D3-232ENST00000514755 PRSS33Q8NF86 280 aa11.65□□□□□ -0.54
UBE2D3-232ENST00000514755 BPIFB1Q8TDL5 484 aa11.65□□□□□ -0.54
UBE2D3-232ENST00000514755 CEP295NLQ96MC4 621 aa11.65□□□□□ -0.54
UBE2D3-232ENST00000514755 KREMEN1Q96MU8 473 aa11.65□□□□□ -0.54
UBE2D3-232ENST00000514755 NT5C1BQ96P26 610 aa11.65□□□□□ -0.54
UBE2D3-232ENST00000514755 ZSWIM1Q9BR11 485 aa11.65□□□□□ -0.54
UBE2D3-232ENST00000514755 CRACR2AQ9BSW2 395 aa11.65□□□□□ -0.54
UBE2D3-232ENST00000514755 INTS2Q9H0H0 1204 aaKnown RBP11.65□□□□□ -0.54
UBE2D3-232ENST00000514755 TMPRSS4Q9NRS4 437 aa11.65□□□□□ -0.54
UBE2D3-232ENST00000514755 TDP1Q9NUW8 608 aa11.65□□□□□ -0.54
UBE2D3-232ENST00000514755 OBP2AQ9NY56 170 aa11.65□□□□□ -0.54
UBE2D3-232ENST00000514755 GTSE1Q9NYZ3 720 aa11.65□□□□□ -0.54
UBE2D3-232ENST00000514755 IL37Q9NZH6 218 aa11.65□□□□□ -0.54
UBE2D3-232ENST00000514755 TRPM5Q9NZQ8 1165 aa11.65□□□□□ -0.54
UBE2D3-232ENST00000514755 KIF26AQ9ULI4 1882 aaPredicted RBP11.65□□□□□ -0.54
UBE2D3-232ENST00000514755 MYO16Q9Y6X6 1858 aa11.64□□□□□ -0.55
UBE2D3-232ENST00000514755 FAM92AA1XBS5 289 aa11.64□□□□□ -0.55
UBE2D3-232ENST00000514755 CHADO15335 359 aa11.64□□□□□ -0.55
UBE2D3-232ENST00000514755 ABL1P00519 1130 aa11.64□□□□□ -0.55
UBE2D3-232ENST00000514755 CKMP06732 381 aa11.64□□□□□ -0.55
UBE2D3-232ENST00000514755 DCNP07585 359 aaKnown RBP11.64□□□□□ -0.55
UBE2D3-232ENST00000514755 GLULP15104 373 aa11.64□□□□□ -0.55
UBE2D3-232ENST00000514755 MTIF2P46199 727 aaKnown RBP11.64□□□□□ -0.55
UBE2D3-232ENST00000514755 PFKPQ01813 784 aa11.64□□□□□ -0.55
UBE2D3-232ENST00000514755 TNK2Q07912 1038 aa11.64□□□□□ -0.55
UBE2D3-232ENST00000514755 ZNF77Q15935 545 aa11.64□□□□□ -0.55
UBE2D3-232ENST00000514755 TPD52L1Q16890 204 aaPredicted RBP11.64□□□□□ -0.55
UBE2D3-232ENST00000514755 ARHGAP17Q68EM7 881 aa11.64□□□□□ -0.55
UBE2D3-232ENST00000514755 TMEM270Q6UE05 265 aa11.64□□□□□ -0.55
UBE2D3-232ENST00000514755 TTC30AQ86WT1 665 aa11.64□□□□□ -0.55
UBE2D3-232ENST00000514755 YAF2Q8IY57 180 aa11.64□□□□□ -0.55
UBE2D3-232ENST00000514755 CELF5Q8N6W0 485 aaKnown RBP11.64□□□□□ -0.55
UBE2D3-232ENST00000514755 TTC16Q8NEE8 873 aa11.64□□□□□ -0.55
UBE2D3-232ENST00000514755 TFAP2BQ92481 460 aa11.64□□□□□ -0.55
UBE2D3-232ENST00000514755 DNASE1L2Q92874 299 aa11.64□□□□□ -0.55
UBE2D3-232ENST00000514755 IRF7Q92985 503 aa11.64□□□□□ -0.55
UBE2D3-232ENST00000514755 FBXO32Q969P5 355 aa11.64□□□□□ -0.55
UBE2D3-232ENST00000514755 E2F7Q96AV8 911 aa11.64□□□□□ -0.55
UBE2D3-232ENST00000514755 DDX23Q9BUQ8 820 aaKnown RBP11.64□□□□□ -0.55
UBE2D3-232ENST00000514755 DUSP16Q9BY84 665 aa11.64□□□□□ -0.55
UBE2D3-232ENST00000514755 THAP9Q9H5L6 903 aa11.64□□□□□ -0.55
UBE2D3-232ENST00000514755 GMIPQ9P107 970 aa11.64□□□□□ -0.55
UBE2D3-232ENST00000514755 PCDHB4Q9Y5E5 795 aa11.64□□□□□ -0.55
UBE2D3-232ENST00000514755 HELZP42694 1942 aaKnown RBP11.63□□□□□ -0.55
UBE2D3-232ENST00000514755 TRAV19A0A0A6YYK7 116 aa11.63□□□□□ -0.55
UBE2D3-232ENST00000514755 KANSL1LA0AUZ9 987 aa11.63□□□□□ -0.55
UBE2D3-232ENST00000514755 OTOL1A6NHN0 477 aaPredicted RBP11.63□□□□□ -0.55
UBE2D3-232ENST00000514755 SOBPA7XYQ1 873 aa11.63□□□□□ -0.55
UBE2D3-232ENST00000514755 LILRA1O75019 489 aa11.63□□□□□ -0.55
UBE2D3-232ENST00000514755 RTN3O95197 1032 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms