RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 LIN52Q52LA3 116 aa13.6□□□□□ -0.23
TCOF1-213ENST00000514442 ANO7Q6IWH7 933 aa13.6□□□□□ -0.23
TCOF1-213ENST00000514442 TLDC1Q6P9B6 456 aa13.6□□□□□ -0.23
TCOF1-213ENST00000514442 TTC30AQ86WT1 665 aa13.6□□□□□ -0.23
TCOF1-213ENST00000514442 TUT1Q9H6E5 874 aaKnown RBP13.6□□□□□ -0.23
TCOF1-213ENST00000514442 FAM8A1Q9UBU6 413 aa13.6□□□□□ -0.23
TCOF1-213ENST00000514442 MOSPD1Q9UJG1 213 aa13.6□□□□□ -0.23
TCOF1-213ENST00000514442 ZNF229Q9UJW7 825 aa13.6□□□□□ -0.23
TCOF1-213ENST00000514442 WNT7AO00755 349 aa13.6□□□□□ -0.23
TCOF1-213ENST00000514442 SLC12A3P55017 1021 aa13.6□□□□□ -0.23
TCOF1-213ENST00000514442 IL17AQ16552 155 aa13.6□□□□□ -0.23
TCOF1-213ENST00000514442 IYDQ6PHW0 289 aa13.6□□□□□ -0.23
TCOF1-213ENST00000514442 EXOC3L1Q86VI1 746 aa13.6□□□□□ -0.23
TCOF1-213ENST00000514442 FITM2Q8N6M3 262 aa13.6□□□□□ -0.23
TCOF1-213ENST00000514442 MEIS2O14770 477 aa13.6□□□□□ -0.23
TCOF1-213ENST00000514442 MGEA5O60502 916 aa13.6□□□□□ -0.23
TCOF1-213ENST00000514442 FAM58BPP0C7Q3 252 aa13.6□□□□□ -0.23
TCOF1-213ENST00000514442 RBP3P10745 1247 aa13.6□□□□□ -0.23
TCOF1-213ENST00000514442 PCSK1P29120 753 aa13.6□□□□□ -0.23
TCOF1-213ENST00000514442 HMOX2P30519 316 aa13.6□□□□□ -0.23
TCOF1-213ENST00000514442 KIF19Q2TAC6 998 aa13.6□□□□□ -0.23
TCOF1-213ENST00000514442 LPCAT2Q7L5N7 544 aa13.6□□□□□ -0.23
TCOF1-213ENST00000514442 NDUFAF2Q8N183 169 aa13.6□□□□□ -0.23
TCOF1-213ENST00000514442 FAM71DQ8N9W8 422 aa13.6□□□□□ -0.23
TCOF1-213ENST00000514442 HASPINQ8TF76 798 aa13.6□□□□□ -0.23
TCOF1-213ENST00000514442 HAS1Q92839 578 aa13.6□□□□□ -0.23
TCOF1-213ENST00000514442 KLF6Q99612 283 aaPredicted RBP13.6□□□□□ -0.23
TCOF1-213ENST00000514442 TRIM62Q9BVG3 475 aa13.6□□□□□ -0.23
TCOF1-213ENST00000514442 CAAP1Q9H8G2 361 aa13.6□□□□□ -0.23
TCOF1-213ENST00000514442 BAG5Q9UL15 447 aa13.6□□□□□ -0.23
TCOF1-213ENST00000514442 BTNL10A8MVZ5 291 aa13.6□□□□□ -0.23
TCOF1-213ENST00000514442 OCM2P0CE71 109 aa13.6□□□□□ -0.23
TCOF1-213ENST00000514442 OCMP0CE72 109 aaPredicted RBP13.6□□□□□ -0.23
TCOF1-213ENST00000514442 STX3Q13277 289 aa13.6□□□□□ -0.23
TCOF1-213ENST00000514442 OASLQ15646 514 aaKnown RBP13.6□□□□□ -0.23
TCOF1-213ENST00000514442 CRY2Q49AN0 593 aa13.6□□□□□ -0.23
TCOF1-213ENST00000514442 PPP1R13LQ8WUF5 828 aa13.6□□□□□ -0.23
TCOF1-213ENST00000514442 MKL1Q969V6 931 aa13.6□□□□□ -0.23
TCOF1-213ENST00000514442 ZNF512Q96ME7 567 aaPredicted RBP13.6□□□□□ -0.23
TCOF1-213ENST00000514442 FHDC1Q9C0D6 1143 aaPredicted RBP13.6□□□□□ -0.23
TCOF1-213ENST00000514442 ABI2Q9NYB9 513 aaPredicted RBP13.6□□□□□ -0.23
TCOF1-213ENST00000514442 E2F8A0AVK6 867 aa13.6□□□□□ -0.23
TCOF1-213ENST00000514442 C2CD2LO14523 706 aa13.6□□□□□ -0.23
TCOF1-213ENST00000514442 RRM1P23921 792 aa13.6□□□□□ -0.23
TCOF1-213ENST00000514442 PPARGP37231 505 aaPredicted RBP13.6□□□□□ -0.23
TCOF1-213ENST00000514442 ITGA9Q13797 1035 aa13.6□□□□□ -0.23
TCOF1-213ENST00000514442 KCTD21Q4G0X4 260 aa13.6□□□□□ -0.23
TCOF1-213ENST00000514442 TAS2R42Q7RTR8 314 aa13.6□□□□□ -0.23
TCOF1-213ENST00000514442 RNF180Q86T96 592 aa13.6□□□□□ -0.23
TCOF1-213ENST00000514442 ARHGEF19Q8IW93 802 aa13.6□□□□□ -0.23
TCOF1-213ENST00000514442 RBM12BQ8IXT5 1001 aaKnown RBP13.6□□□□□ -0.23
TCOF1-213ENST00000514442 ATPAF2Q8N5M1 289 aa13.6□□□□□ -0.23
TCOF1-213ENST00000514442 TUBA8Q9NY65 449 aaPredicted RBP13.6□□□□□ -0.23
TCOF1-213ENST00000514442 NEMP1O14524 444 aa13.59□□□□□ -0.23
TCOF1-213ENST00000514442 DEAF1O75398 565 aaPredicted RBP13.59□□□□□ -0.23
TCOF1-213ENST00000514442 ADORA2AP29274 412 aa13.59□□□□□ -0.23
TCOF1-213ENST00000514442 NUMBP49757 651 aa13.59□□□□□ -0.23
TCOF1-213ENST00000514442 CDCA2Q69YH5 1023 aaPredicted RBP13.59□□□□□ -0.23
TCOF1-213ENST00000514442 ELMSAN1Q6PJG2 1045 aa13.59□□□□□ -0.23
TCOF1-213ENST00000514442 C16orf89Q6UX73 402 aa13.59□□□□□ -0.23
TCOF1-213ENST00000514442 ZC3H7BQ9UGR2 993 aaKnown RBP13.59□□□□□ -0.23
TCOF1-213ENST00000514442 ADGRA3Q8IWK6 1321 aa13.59□□□□□ -0.23
TCOF1-213ENST00000514442 KPNA7A9QM74 516 aa13.59□□□□□ -0.23
TCOF1-213ENST00000514442 B3GAT3O94766 335 aa13.59□□□□□ -0.23
TCOF1-213ENST00000514442 PSMC3P17980 439 aa13.59□□□□□ -0.23
TCOF1-213ENST00000514442 FAXCQ5TGI0 409 aa13.59□□□□□ -0.23
TCOF1-213ENST00000514442 ACAD11Q709F0 780 aa13.59□□□□□ -0.23
TCOF1-213ENST00000514442 NET1Q7Z628 596 aaPredicted RBP13.59□□□□□ -0.23
TCOF1-213ENST00000514442 ATP8B4Q8TF62 1192 aa13.59□□□□□ -0.23
TCOF1-213ENST00000514442 C17orf50Q8WW18 174 aa13.59□□□□□ -0.23
TCOF1-213ENST00000514442 PPP1R14BQ96C90 147 aa13.59□□□□□ -0.23
TCOF1-213ENST00000514442 MAGEB5Q9BZ81 275 aa13.59□□□□□ -0.23
TCOF1-213ENST00000514442 NDEL1Q9GZM8 345 aa13.59□□□□□ -0.23
TCOF1-213ENST00000514442 LTN1O94822 1766 aa13.59□□□□□ -0.23
TCOF1-213ENST00000514442 RNF103-CHMP3A0A140T963 221 aa13.59□□□□□ -0.23
TCOF1-213ENST00000514442 SNX2O60749 519 aa13.59□□□□□ -0.23
TCOF1-213ENST00000514442 CHEK2O96017 543 aa13.59□□□□□ -0.23
TCOF1-213ENST00000514442 TPBGLP0DKB5 382 aa13.59□□□□□ -0.23
TCOF1-213ENST00000514442 ANPEPP15144 967 aa13.59□□□□□ -0.23
TCOF1-213ENST00000514442 CASP5P51878 434 aa13.59□□□□□ -0.23
TCOF1-213ENST00000514442 RRP1BQ14684 758 aaKnown RBP13.59□□□□□ -0.23
TCOF1-213ENST00000514442 PCSK7Q16549 785 aa13.59□□□□□ -0.23
TCOF1-213ENST00000514442 CNPY1Q3B7I2 92 aa13.59□□□□□ -0.23
TCOF1-213ENST00000514442 FKBP1CQ5VVH2 108 aa13.59□□□□□ -0.23
TCOF1-213ENST00000514442 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.59□□□□□ -0.23
TCOF1-213ENST00000514442 SLC25A41Q8N5S1 370 aa13.59□□□□□ -0.23
TCOF1-213ENST00000514442 TMC2Q8TDI7 906 aa13.59□□□□□ -0.23
TCOF1-213ENST00000514442 E2F7Q96AV8 911 aa13.59□□□□□ -0.23
TCOF1-213ENST00000514442 ZBTB45Q96K62 511 aaPredicted RBP13.59□□□□□ -0.23
TCOF1-213ENST00000514442 GPATCH2LQ9NWQ4 482 aa13.59□□□□□ -0.23
TCOF1-213ENST00000514442 AP4S1Q9Y587 144 aa13.59□□□□□ -0.23
TCOF1-213ENST00000514442 FRMPD4Q14CM0 1322 aa13.59□□□□□ -0.23
TCOF1-213ENST00000514442 E5RI56 91 aa13.59□□□□□ -0.23
TCOF1-213ENST00000514442 ZNF263O14978 683 aa13.59□□□□□ -0.23
TCOF1-213ENST00000514442 LYNP07948 512 aa13.59□□□□□ -0.23
TCOF1-213ENST00000514442 RPL5P46777 297 aaKnown RBP13.59□□□□□ -0.23
TCOF1-213ENST00000514442 DUPD1Q68J44 220 aa13.59□□□□□ -0.23
TCOF1-213ENST00000514442 ARID3BQ8IVW6 561 aaPredicted RBP13.59□□□□□ -0.23
TCOF1-213ENST00000514442 NAT14Q8WUY8 206 aa13.59□□□□□ -0.23
TCOF1-213ENST00000514442 DGCR14Q96DF8 476 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms