RNA–Protein interactions for RNA: ENST00000513438.1

POLR2J3-217, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3 BASIC

Gene POLR2J3, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-217ENST00000513438 BEST1O76090 585 aa14.18□□□□□ -0.14
POLR2J3-217ENST00000513438 ALDH1A2O94788 518 aa14.18□□□□□ -0.14
POLR2J3-217ENST00000513438 CHRM1P11229 460 aaPredicted RBP14.18□□□□□ -0.14
POLR2J3-217ENST00000513438 CCDC130P13994 396 aa14.18□□□□□ -0.14
POLR2J3-217ENST00000513438 KIR2DL1P43626 348 aaPredicted RBP14.18□□□□□ -0.14
POLR2J3-217ENST00000513438 DHPSP49366 369 aaPredicted RBP14.18□□□□□ -0.14
POLR2J3-217ENST00000513438 NDST1P52848 882 aa14.18□□□□□ -0.14
POLR2J3-217ENST00000513438 KDSRQ06136 332 aa14.18□□□□□ -0.14
POLR2J3-217ENST00000513438 ORC1Q13415 861 aa14.18□□□□□ -0.14
POLR2J3-217ENST00000513438 PKP1Q13835 747 aa14.18□□□□□ -0.14
POLR2J3-217ENST00000513438 CRYBG2Q8N1P7 616 aa14.18□□□□□ -0.14
POLR2J3-217ENST00000513438 SPRYD3Q8NCJ5 442 aa14.18□□□□□ -0.14
POLR2J3-217ENST00000513438 ZMIZ2Q8NF64 920 aa14.18□□□□□ -0.14
POLR2J3-217ENST00000513438 OLIG1Q8TAK6 271 aa14.18□□□□□ -0.14
POLR2J3-217ENST00000513438 RLN3Q8WXF3 142 aa14.18□□□□□ -0.14
POLR2J3-217ENST00000513438 OTUB2Q96DC9 234 aa14.18□□□□□ -0.14
POLR2J3-217ENST00000513438 SMARCD1Q96GM5 515 aa14.18□□□□□ -0.14
POLR2J3-217ENST00000513438 SMOQ99835 787 aa14.18□□□□□ -0.14
POLR2J3-217ENST00000513438 KCTD10Q9H3F6 313 aa14.18□□□□□ -0.14
POLR2J3-217ENST00000513438 POLMQ9NP87 494 aaPredicted RBP14.18□□□□□ -0.14
POLR2J3-217ENST00000513438 GMIPQ9P107 970 aa14.18□□□□□ -0.14
POLR2J3-217ENST00000513438 TBC1D3BA6NDS4 549 aa14.17□□□□□ -0.14
POLR2J3-217ENST00000513438 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.17□□□□□ -0.14
POLR2J3-217ENST00000513438 PATE3B3GLJ2 98 aa14.17□□□□□ -0.14
POLR2J3-217ENST00000513438 KHNYNO15037 678 aaKnown RBP14.17□□□□□ -0.14
POLR2J3-217ENST00000513438 RPN1P04843 607 aaKnown RBP14.17□□□□□ -0.14
POLR2J3-217ENST00000513438 ZDHHC11BP0C7U3 371 aa14.17□□□□□ -0.14
POLR2J3-217ENST00000513438 IRF1P10914 325 aa14.17□□□□□ -0.14
POLR2J3-217ENST00000513438 P4HA1P13674 534 aa14.17□□□□□ -0.14
POLR2J3-217ENST00000513438 PGFP49763 221 aa14.17□□□□□ -0.14
POLR2J3-217ENST00000513438 MAP3K7CLP57077 242 aa14.17□□□□□ -0.14
POLR2J3-217ENST00000513438 ZACNQ401N2 412 aa14.17□□□□□ -0.14
POLR2J3-217ENST00000513438 HSF5Q4G112 596 aaPredicted RBP14.17□□□□□ -0.14
POLR2J3-217ENST00000513438 EOGTQ5NDL2 527 aa14.17□□□□□ -0.14
POLR2J3-217ENST00000513438 BTBD8Q5XKL5 378 aa14.17□□□□□ -0.14
POLR2J3-217ENST00000513438 SPOPLQ6IQ16 392 aa14.17□□□□□ -0.14
POLR2J3-217ENST00000513438 PSAPL1Q6NUJ1 521 aa14.17□□□□□ -0.14
POLR2J3-217ENST00000513438 SV2AQ7L0J3 742 aa14.17□□□□□ -0.14
POLR2J3-217ENST00000513438 CYP2U1Q7Z449 544 aa14.17□□□□□ -0.14
POLR2J3-217ENST00000513438 TMEM25Q86YD3 366 aa14.17□□□□□ -0.14
POLR2J3-217ENST00000513438 HSCBQ8IWL3 235 aa14.17□□□□□ -0.14
POLR2J3-217ENST00000513438 BBS7Q8IWZ6 715 aa14.17□□□□□ -0.14
POLR2J3-217ENST00000513438 PHTF2Q8N3S3 785 aa14.17□□□□□ -0.14
POLR2J3-217ENST00000513438 FRMD1Q8N878 549 aa14.17□□□□□ -0.14
POLR2J3-217ENST00000513438 C12orf29Q8N999 325 aa14.17□□□□□ -0.14
POLR2J3-217ENST00000513438 SLC2A14Q8TDB8 520 aa14.17□□□□□ -0.14
POLR2J3-217ENST00000513438 TMC2Q8TDI7 906 aa14.17□□□□□ -0.14
POLR2J3-217ENST00000513438 TMEM174Q8WUU8 243 aa14.17□□□□□ -0.14
POLR2J3-217ENST00000513438 KRT82Q9NSB4 513 aa14.17□□□□□ -0.14
POLR2J3-217ENST00000513438 CIZ1Q9ULV3 898 aaPredicted RBP14.17□□□□□ -0.14
POLR2J3-217ENST00000513438 MYH10P35580 1976 aa14.16□□□□□ -0.14
POLR2J3-217ENST00000513438 CFAP47Q6ZTR5 3102 aa14.16□□□□□ -0.14
POLR2J3-217ENST00000513438 A0A1B0GVL5 298 aa14.16□□□□□ -0.14
POLR2J3-217ENST00000513438 LNP1A1A4G5 178 aa14.16□□□□□ -0.14
POLR2J3-217ENST00000513438 MAP3K13O43283 966 aa14.16□□□□□ -0.14
POLR2J3-217ENST00000513438 ADAM23O75077 832 aa14.16□□□□□ -0.14
POLR2J3-217ENST00000513438 TULP3O75386 442 aa14.16□□□□□ -0.14
POLR2J3-217ENST00000513438 TBX18O95935 607 aa14.16□□□□□ -0.14
POLR2J3-217ENST00000513438 NR3C1P04150 777 aa14.16□□□□□ -0.14
POLR2J3-217ENST00000513438 P2RY2P41231 377 aa14.16□□□□□ -0.14
POLR2J3-217ENST00000513438 TUBP50607 506 aa14.16□□□□□ -0.14
POLR2J3-217ENST00000513438 IRX4P78413 519 aa14.16□□□□□ -0.14
POLR2J3-217ENST00000513438 SHC2P98077 582 aa14.16□□□□□ -0.14
POLR2J3-217ENST00000513438 ANO4Q32M45 955 aa14.16□□□□□ -0.14
POLR2J3-217ENST00000513438 C1orf220Q5T0J3 134 aa14.16□□□□□ -0.14
POLR2J3-217ENST00000513438 CEP135Q66GS9 1140 aa14.16□□□□□ -0.14
POLR2J3-217ENST00000513438 UNC93AQ86WB7 457 aa14.16□□□□□ -0.14
POLR2J3-217ENST00000513438 ETFBKMTQ8IXQ9 262 aa14.16□□□□□ -0.14
POLR2J3-217ENST00000513438 PGBD3Q8N328 593 aa14.16□□□□□ -0.14
POLR2J3-217ENST00000513438 PIGKQ92643 395 aa14.16□□□□□ -0.14
POLR2J3-217ENST00000513438 TAF4BQ92750 862 aa14.16□□□□□ -0.14
POLR2J3-217ENST00000513438 NACA2Q9H009 215 aa14.16□□□□□ -0.14
POLR2J3-217ENST00000513438 FBXO44Q9H4M3 255 aa14.16□□□□□ -0.14
POLR2J3-217ENST00000513438 CSNK1G1Q9HCP0 422 aa14.16□□□□□ -0.14
POLR2J3-217ENST00000513438 SPHK2Q9NRA0 654 aa14.16□□□□□ -0.14
POLR2J3-217ENST00000513438 FAM49BQ9NUQ9 324 aa14.16□□□□□ -0.14
POLR2J3-217ENST00000513438 BCCIPQ9P287 314 aaKnown RBP eCLIP14.16□□□□□ -0.14
POLR2J3-217ENST00000513438 DEC1Q9P2X7 70 aa14.16□□□□□ -0.14
POLR2J3-217ENST00000513438 HMGXB4Q9UGU5 601 aa14.16□□□□□ -0.14
POLR2J3-217ENST00000513438 RALYQ9UKM9 306 aaKnown RBP14.16□□□□□ -0.14
POLR2J3-217ENST00000513438 GON4LQ3T8J9 2241 aa14.15□□□□□ -0.14
POLR2J3-217ENST00000513438 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.15□□□□□ -0.14
POLR2J3-217ENST00000513438 IKBKBO14920 756 aa14.15□□□□□ -0.14
POLR2J3-217ENST00000513438 TRIM24O15164 1050 aa14.15□□□□□ -0.14
POLR2J3-217ENST00000513438 HOXC11O43248 304 aaPredicted RBP14.15□□□□□ -0.14
POLR2J3-217ENST00000513438 TLR5O60602 858 aa14.15□□□□□ -0.14
POLR2J3-217ENST00000513438 ASS1P00966 412 aaKnown RBP14.15□□□□□ -0.14
POLR2J3-217ENST00000513438 HLA-DRAP01903 254 aa14.15□□□□□ -0.14
POLR2J3-217ENST00000513438 ADORA2BP29275 332 aa14.15□□□□□ -0.14
POLR2J3-217ENST00000513438 PREPLQ4J6C6 727 aaPredicted RBP14.15□□□□□ -0.14
POLR2J3-217ENST00000513438 DAB2IPQ5VWQ8 1189 aa14.15□□□□□ -0.14
POLR2J3-217ENST00000513438 NUDT18Q6ZVK8 323 aa14.15□□□□□ -0.14
POLR2J3-217ENST00000513438 HTR3DQ70Z44 454 aa14.15□□□□□ -0.14
POLR2J3-217ENST00000513438 TMEFF1Q8IYR6 380 aa14.15□□□□□ -0.14
POLR2J3-217ENST00000513438 WHAMMQ8TF30 809 aa14.15□□□□□ -0.14
POLR2J3-217ENST00000513438 HMGB4Q8WW32 186 aa14.15□□□□□ -0.14
POLR2J3-217ENST00000513438 DUSP9Q99956 384 aaKnown RBP14.15□□□□□ -0.14
POLR2J3-217ENST00000513438 KLF16Q9BXK1 252 aaPredicted RBP14.15□□□□□ -0.14
POLR2J3-217ENST00000513438 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.15□□□□□ -0.14
POLR2J3-217ENST00000513438 TLR8Q9NR97 1041 aaKnown RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms