RNA–Protein interactions for RNA: ENST00000513098.5

UBE2D3-231, Transcript of ubiquitin conjugating enzyme E2 D3, human

TSL 3

Gene UBE2D3, Length 702 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-231	ENST00000513098	TMEM8A	Q9HCN3	771 aa		13.28	□□□□□ -0.28
UBE2D3-231	ENST00000513098	CYLD	Q9NQC7	956 aa		13.28	□□□□□ -0.28
UBE2D3-231	ENST00000513098	TLR8	Q9NR97	1041 aa	Known RBP	13.28	□□□□□ -0.28
UBE2D3-231	ENST00000513098	KRT82	Q9NSB4	513 aa		13.28	□□□□□ -0.28
UBE2D3-231	ENST00000513098	POLR3B	Q9NW08	1133 aa	Predicted RBP	13.28	□□□□□ -0.28
UBE2D3-231	ENST00000513098	SMPD4	Q9NXE4	827 aa		13.28	□□□□□ -0.28
UBE2D3-231	ENST00000513098	HMGXB4	Q9UGU5	601 aa		13.28	□□□□□ -0.28
UBE2D3-231	ENST00000513098	MMP17	Q9ULZ9	603 aa		13.28	□□□□□ -0.28
UBE2D3-231	ENST00000513098	SCML2	Q9UQR0	700 aa		13.28	□□□□□ -0.28
UBE2D3-231	ENST00000513098	KIAA1549L	Q6ZVL6	1849 aa		13.27	□□□□□ -0.28
UBE2D3-231	ENST00000513098	MYH10	P35580	1976 aa		13.27	□□□□□ -0.28
UBE2D3-231	ENST00000513098	ABCA7	Q8IZY2	2146 aa		13.27	□□□□□ -0.28
UBE2D3-231	ENST00000513098	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	13.27	□□□□□ -0.29
UBE2D3-231	ENST00000513098	HOXC11	O43248	304 aa	Predicted RBP	13.27	□□□□□ -0.29
UBE2D3-231	ENST00000513098	GREM1	O60565	184 aa		13.27	□□□□□ -0.29
UBE2D3-231	ENST00000513098	CILP	O75339	1184 aa		13.27	□□□□□ -0.29
UBE2D3-231	ENST00000513098	KAT7	O95251	611 aa		13.27	□□□□□ -0.29
UBE2D3-231	ENST00000513098	FAM200B	P0CF97	657 aa		13.27	□□□□□ -0.29
UBE2D3-231	ENST00000513098	CCDC192	P0DO97	292 aa		13.27	□□□□□ -0.29
UBE2D3-231	ENST00000513098	CCDC130	P13994	396 aa		13.27	□□□□□ -0.29
UBE2D3-231	ENST00000513098	GRIA2	P42262	883 aa		13.27	□□□□□ -0.29
UBE2D3-231	ENST00000513098	PIK3CA	P42336	1068 aa		13.27	□□□□□ -0.29
UBE2D3-231	ENST00000513098	SLC6A11	P48066	632 aa		13.27	□□□□□ -0.29
UBE2D3-231	ENST00000513098	DGKE	P52429	567 aa		13.27	□□□□□ -0.29
UBE2D3-231	ENST00000513098	MAP3K7CL	P57077	242 aa		13.27	□□□□□ -0.29
UBE2D3-231	ENST00000513098	GAD2	Q05329	585 aa		13.27	□□□□□ -0.29
UBE2D3-231	ENST00000513098	IFRD2	Q12894	506 aa	Predicted RBP	13.27	□□□□□ -0.29
UBE2D3-231	ENST00000513098	PLK5	Q496M5	336 aa		13.27	□□□□□ -0.29
UBE2D3-231	ENST00000513098	PREPL	Q4J6C6	727 aa	Predicted RBP	13.27	□□□□□ -0.29
UBE2D3-231	ENST00000513098	KRT39	Q6A163	491 aa		13.27	□□□□□ -0.29
UBE2D3-231	ENST00000513098	CLEC20A	Q6ZU45	233 aa		13.27	□□□□□ -0.29
UBE2D3-231	ENST00000513098	C11orf74	Q86VG3	221 aa		13.27	□□□□□ -0.29
UBE2D3-231	ENST00000513098	ETFBKMT	Q8IXQ9	262 aa		13.27	□□□□□ -0.29
UBE2D3-231	ENST00000513098	PHTF2	Q8N3S3	785 aa		13.27	□□□□□ -0.29
UBE2D3-231	ENST00000513098	SPATA20	Q8TB22	786 aa		13.27	□□□□□ -0.29
UBE2D3-231	ENST00000513098	CYFIP2	Q96F07	1278 aa		13.27	□□□□□ -0.29
UBE2D3-231	ENST00000513098	HHIP	Q96QV1	700 aa		13.27	□□□□□ -0.29
UBE2D3-231	ENST00000513098	TWNK	Q96RR1	684 aa		13.27	□□□□□ -0.29
UBE2D3-231	ENST00000513098	UBXN6	Q9BZV1	441 aa		13.27	□□□□□ -0.29
UBE2D3-231	ENST00000513098	DNAI2	Q9GZS0	605 aa		13.27	□□□□□ -0.29
UBE2D3-231	ENST00000513098	NIF3L1	Q9GZT8	377 aa		13.27	□□□□□ -0.29
UBE2D3-231	ENST00000513098	DUSP15	Q9H1R2	295 aa	Predicted RBP	13.27	□□□□□ -0.29
UBE2D3-231	ENST00000513098	CCSER2	Q9H7U1	834 aa		13.27	□□□□□ -0.29
UBE2D3-231	ENST00000513098	GMIP	Q9P107	970 aa		13.27	□□□□□ -0.29
UBE2D3-231	ENST00000513098	MAPK8IP1	Q9UQF2	711 aa		13.27	□□□□□ -0.29
UBE2D3-231	ENST00000513098	PCDHA5	Q9Y5H7	936 aa		13.27	□□□□□ -0.29
UBE2D3-231	ENST00000513098	TLR5	O60602	858 aa		13.26	□□□□□ -0.29
UBE2D3-231	ENST00000513098	RHOBTB1	O94844	696 aa		13.26	□□□□□ -0.29
UBE2D3-231	ENST00000513098	TRIM49	P0CI25	452 aa		13.26	□□□□□ -0.29
UBE2D3-231	ENST00000513098	TRIM49C	P0CI26	452 aa		13.26	□□□□□ -0.29
UBE2D3-231	ENST00000513098	ADH5	P11766	374 aa		13.26	□□□□□ -0.29
UBE2D3-231	ENST00000513098	KIR2DL1	P43626	348 aa	Predicted RBP	13.26	□□□□□ -0.29
UBE2D3-231	ENST00000513098	PGF	P49763	221 aa		13.26	□□□□□ -0.29
UBE2D3-231	ENST00000513098	KIF11	P52732	1056 aa		13.26	□□□□□ -0.29
UBE2D3-231	ENST00000513098	CRY1	Q16526	586 aa		13.26	□□□□□ -0.29
UBE2D3-231	ENST00000513098	C2orf27A	Q580R0	203 aa		13.26	□□□□□ -0.29
UBE2D3-231	ENST00000513098	LY6G5C	Q5SRR4	150 aa		13.26	□□□□□ -0.29
UBE2D3-231	ENST00000513098	ZC3H3	Q8IXZ2	948 aa	Known RBP	13.26	□□□□□ -0.29
UBE2D3-231	ENST00000513098	FMR1NB	Q8N0W7	255 aa	Predicted RBP	13.26	□□□□□ -0.29
UBE2D3-231	ENST00000513098	CCDC150	Q8NCX0	1101 aa		13.26	□□□□□ -0.29
UBE2D3-231	ENST00000513098	TSTD1	Q8NFU3	115 aa		13.26	□□□□□ -0.29
UBE2D3-231	ENST00000513098	CNOT6L	Q96LI5	555 aa	Known RBP	13.26	□□□□□ -0.29
UBE2D3-231	ENST00000513098	GSDMA	Q96QA5	445 aa		13.26	□□□□□ -0.29
UBE2D3-231	ENST00000513098	KLF16	Q9BXK1	252 aa	Predicted RBP	13.26	□□□□□ -0.29
UBE2D3-231	ENST00000513098	DUSP16	Q9BY84	665 aa		13.26	□□□□□ -0.29
UBE2D3-231	ENST00000513098	GTPBP4	Q9BZE4	634 aa	Known RBP	13.26	□□□□□ -0.29
UBE2D3-231	ENST00000513098	ARRDC1-AS1	Q9H2J1	176 aa		13.26	□□□□□ -0.29
UBE2D3-231	ENST00000513098	SH3BP1	Q9Y3L3	701 aa		13.26	□□□□□ -0.29
UBE2D3-231	ENST00000513098	STARD13	Q9Y3M8	1113 aa		13.26	□□□□□ -0.29
UBE2D3-231	ENST00000513098	USP3	Q9Y6I4	520 aa		13.26	□□□□□ -0.29
UBE2D3-231	ENST00000513098	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	13.25	□□□□□ -0.29
UBE2D3-231	ENST00000513098	TM4SF5	O14894	197 aa		13.25	□□□□□ -0.29
UBE2D3-231	ENST00000513098	CETN3	O15182	167 aa		13.25	□□□□□ -0.29
UBE2D3-231	ENST00000513098	STX10	O60499	249 aa		13.25	□□□□□ -0.29
UBE2D3-231	ENST00000513098	APOD	P05090	189 aa		13.25	□□□□□ -0.29
UBE2D3-231	ENST00000513098	ATP5C1	P36542	298 aa	Known RBP	13.25	□□□□□ -0.29
UBE2D3-231	ENST00000513098	PSEN1	P49768	467 aa		13.25	□□□□□ -0.29
UBE2D3-231	ENST00000513098	MESP2	Q0VG99	397 aa		13.25	□□□□□ -0.29
UBE2D3-231	ENST00000513098	ORC1	Q13415	861 aa		13.25	□□□□□ -0.29
UBE2D3-231	ENST00000513098	USP39	Q53GS9	565 aa	Known RBP	13.25	□□□□□ -0.29
UBE2D3-231	ENST00000513098	CCDC186	Q7Z3E2	898 aa		13.25	□□□□□ -0.29
UBE2D3-231	ENST00000513098	C12orf40	Q86WS4	652 aa		13.25	□□□□□ -0.29
UBE2D3-231	ENST00000513098	ELOA2	Q8IYF1	753 aa	Predicted RBP	13.25	□□□□□ -0.29
UBE2D3-231	ENST00000513098	IL17RC	Q8NAC3	791 aa		13.25	□□□□□ -0.29
UBE2D3-231	ENST00000513098	FBXL13	Q8NEE6	735 aa		13.25	□□□□□ -0.29
UBE2D3-231	ENST00000513098	ENGASE	Q8NFI3	743 aa		13.25	□□□□□ -0.29
UBE2D3-231	ENST00000513098	OLIG1	Q8TAK6	271 aa		13.25	□□□□□ -0.29
UBE2D3-231	ENST00000513098	DDX1	Q92499	740 aa	Known RBP	13.25	□□□□□ -0.29
UBE2D3-231	ENST00000513098	SPHK2	Q9NRA0	654 aa		13.25	□□□□□ -0.29
UBE2D3-231	ENST00000513098	VPS45	Q9NRW7	570 aa		13.25	□□□□□ -0.29
UBE2D3-231	ENST00000513098	FAM49B	Q9NUQ9	324 aa		13.25	□□□□□ -0.29
UBE2D3-231	ENST00000513098	RMND1	Q9NWS8	449 aa		13.25	□□□□□ -0.29
UBE2D3-231	ENST00000513098	COQ4	Q9Y3A0	265 aa		13.25	□□□□□ -0.29
UBE2D3-231	ENST00000513098	ACACB	O00763	2458 aa		13.25	□□□□□ -0.29
UBE2D3-231	ENST00000513098	GON4L	Q3T8J9	2241 aa		13.24	□□□□□ -0.29
UBE2D3-231	ENST00000513098	DCDC2B	A2VCK2	349 aa		13.24	□□□□□ -0.29
UBE2D3-231	ENST00000513098	GDF9	O60383	454 aa		13.24	□□□□□ -0.29
UBE2D3-231	ENST00000513098	CLSTN1	O94985	981 aa		13.24	□□□□□ -0.29
UBE2D3-231	ENST00000513098	TBX18	O95935	607 aa		13.24	□□□□□ -0.29
UBE2D3-231	ENST00000513098	PRCP	P42785	496 aa		13.24	□□□□□ -0.29

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