RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 TRPM4Q8TD43 1214 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 BCAS4Q8TDM0 211 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 TMEM159Q96B96 161 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 KLRG1Q96E93 195 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 SENP8Q96LD8 212 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 TMEM117Q9H0C3 514 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 SFMBT1Q9UHJ3 866 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 PPRC1Q5VV67 1664 aaKnown RBP4.39□□□□□ -1.71
VCAN-209ENST00000513016 PMPCBO75439 489 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 PFKMP08237 780 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 RBP3P10745 1247 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 MYL2P10916 166 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 ZNF7P17097 686 aaPredicted RBP4.39□□□□□ -1.71
VCAN-209ENST00000513016 EEF1B2P24534 225 aaKnown RBP4.39□□□□□ -1.71
VCAN-209ENST00000513016 GNA13Q14344 377 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 NAB2Q15742 525 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 ZKSCAN8Q15776 578 aaPredicted RBP4.39□□□□□ -1.71
VCAN-209ENST00000513016 CYB5D1Q6P9G0 228 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 SHC4Q6S5L8 630 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 CLYBLQ8N0X4 340 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 CAMKK1Q8N5S9 505 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 CEP70Q8NHQ1 597 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 SMG7Q92540 1137 aaKnown RBP4.39□□□□□ -1.71
VCAN-209ENST00000513016 UPF1Q92900 1129 aaKnown RBP eCLIP4.39□□□□□ -1.71
VCAN-209ENST00000513016 REPS1Q96D71 796 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 QRFPRQ96P65 431 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 PRDM10Q9NQV6 1147 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 XPO7Q9UIA9 1087 aaKnown RBP4.39□□□□□ -1.71
VCAN-209ENST00000513016 GTF3C4Q9UKN8 822 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 MEFVO15553 781 aaPredicted RBP4.39□□□□□ -1.71
VCAN-209ENST00000513016 HS6ST1O60243 411 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 CST8O60676 142 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 HOXB8P17481 243 aaPredicted RBP4.39□□□□□ -1.71
VCAN-209ENST00000513016 PBLDP30039 288 aaPredicted RBP4.39□□□□□ -1.71
VCAN-209ENST00000513016 GALCP54803 685 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 ZNF211Q13398 564 aaPredicted RBP4.39□□□□□ -1.71
VCAN-209ENST00000513016 ZCCHC8Q6NZY4 707 aaKnown RBP4.39□□□□□ -1.71
VCAN-209ENST00000513016 LLGL2Q6P1M3 1020 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 SERPINA13PQ6UXR4 307 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 C11orf96Q7Z7L8 435 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 LGI2Q8N0V4 545 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 SLC30A5Q8TAD4 765 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 ZSCAN18Q8TBC5 510 aaPredicted RBP4.39□□□□□ -1.71
VCAN-209ENST00000513016 OR8D1Q8WZ84 308 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 OSBPL9Q96SU4 736 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 PNKPQ96T60 521 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 EXO5Q9H790 373 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 POLMQ9NP87 494 aaPredicted RBP4.39□□□□□ -1.71
VCAN-209ENST00000513016 GID8Q9NWU2 228 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 A0A1W2PQ67 120 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 BTBD19C9JJ37 291 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 H3BMM5 538 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 INHAP05111 366 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 PAEPP09466 180 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 GNSP15586 552 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 HSPA9P38646 679 aaKnown RBP4.39□□□□□ -1.71
VCAN-209ENST00000513016 FPGSQ05932 587 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 CYP24A1Q07973 514 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 GRM3Q14832 879 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 AMHR2Q16671 573 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 SETMARQ53H47 684 aaPredicted RBP4.39□□□□□ -1.71
VCAN-209ENST00000513016 ARMC12Q5T9G4 340 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 CACHD1Q5VU97 1274 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 TRMT10CQ7L0Y3 403 aaKnown RBP4.39□□□□□ -1.71
VCAN-209ENST00000513016 PRPF39Q86UA1 669 aaKnown RBP4.39□□□□□ -1.71
VCAN-209ENST00000513016 PHC3Q8NDX5 983 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 SPPL2BQ8TCT7 592 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 GPT2Q8TD30 523 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 HELQQ8TDG4 1101 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 ANKS1AQ92625 1134 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 SLC5A5Q92911 643 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 SAMD11Q96NU1 681 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 INTS13Q9NVM9 706 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 SMPD4Q9NXE4 827 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 CYP39A1Q9NYL5 469 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 UBA2Q9UBT2 640 aaPredicted RBP4.39□□□□□ -1.71
VCAN-209ENST00000513016 SMIM35A0A1B0GVV1 85 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 A0A1W2PQJ5 194 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 M0R3G1 203 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 SEPT4O43236 478 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 PSTPIP1O43586 416 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 PHF2O75151 1096 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 ZNF268Q14587 947 aaPredicted RBP4.39□□□□□ -1.71
VCAN-209ENST00000513016 INPP5AQ14642 412 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 NCAPHQ15003 741 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 PPP2R2DQ66LE6 453 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 STOX1Q6ZVD7 989 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 LRRC8DQ7L1W4 858 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 BRSK2Q8IWQ3 736 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 HJURPQ8NCD3 748 aaPredicted RBP4.39□□□□□ -1.71
VCAN-209ENST00000513016 CXorf40BQ96DE9 158 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 GAD1Q99259 594 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 PI4K2AQ9BTU6 479 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 PDGFDQ9GZP0 370 aaPredicted RBP4.39□□□□□ -1.71
VCAN-209ENST00000513016 WWP1Q9H0M0 922 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 TASP1Q9H6P5 420 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 RMND5AQ9H871 391 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 LRRC40Q9H9A6 602 aa4.39□□□□□ -1.71
VCAN-209ENST00000513016 SMG5Q9UPR3 1016 aaKnown RBP4.39□□□□□ -1.71
VCAN-209ENST00000513016 RAD54BQ9Y620 910 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms