RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 SCLT1Q96NL6 688 aa4.92□□□□□ -1.62
HTT-210ENST00000512909 UNKLQ9H9P5 680 aaKnown RBP4.92□□□□□ -1.62
HTT-210ENST00000512909 SLC2A4RGQ9NR83 387 aa4.92□□□□□ -1.62
HTT-210ENST00000512909 TMEM74BQ9NUR3 256 aa4.92□□□□□ -1.62
HTT-210ENST00000512909 MRPS18AQ9NVS2 196 aaKnown RBP4.92□□□□□ -1.62
HTT-210ENST00000512909 LRFN1Q9P244 771 aa4.92□□□□□ -1.62
HTT-210ENST00000512909 FNIP2Q9P278 1114 aa4.92□□□□□ -1.62
HTT-210ENST00000512909 TBC1D30Q9Y2I9 924 aa4.92□□□□□ -1.62
HTT-210ENST00000512909 MRPS17Q9Y2R5 130 aaKnown RBP4.92□□□□□ -1.62
HTT-210ENST00000512909 TRPM2O94759 1503 aa4.92□□□□□ -1.62
HTT-210ENST00000512909 JCADQ9P266 1359 aa4.91□□□□□ -1.62
HTT-210ENST00000512909 CLCA1A8K7I4 914 aa4.91□□□□□ -1.62
HTT-210ENST00000512909 GRXCR1A8MXD5 290 aa4.91□□□□□ -1.62
HTT-210ENST00000512909 IFRD1O00458 451 aaPredicted RBP4.91□□□□□ -1.62
HTT-210ENST00000512909 NPHP1O15259 732 aa4.91□□□□□ -1.62
HTT-210ENST00000512909 RRP9O43818 475 aaKnown RBP4.91□□□□□ -1.62
HTT-210ENST00000512909 NXPH3O95157 252 aa4.91□□□□□ -1.62
HTT-210ENST00000512909 TRAPPC10P48553 1259 aa4.91□□□□□ -1.62
HTT-210ENST00000512909 EFEMP1Q12805 493 aa4.91□□□□□ -1.62
HTT-210ENST00000512909 EIF2B5Q13144 721 aaKnown RBP4.91□□□□□ -1.62
HTT-210ENST00000512909 TP53BP2Q13625 1128 aa4.91□□□□□ -1.62
HTT-210ENST00000512909 SF3B3Q15393 1217 aaKnown RBP4.91□□□□□ -1.62
HTT-210ENST00000512909 SLC35G1Q2M3R5 365 aa4.91□□□□□ -1.62
HTT-210ENST00000512909 ABHD17BQ5VST6 288 aa4.91□□□□□ -1.62
HTT-210ENST00000512909 ARL6IP4Q66PJ3 421 aaKnown RBP4.91□□□□□ -1.62
HTT-210ENST00000512909 ZNF772Q68DY9 489 aaPredicted RBP4.91□□□□□ -1.62
HTT-210ENST00000512909 USP51Q70EK9 711 aa4.91□□□□□ -1.62
HTT-210ENST00000512909 KRT73Q86Y46 540 aa4.91□□□□□ -1.62
HTT-210ENST00000512909 ZNF280BQ86YH2 543 aa4.91□□□□□ -1.62
HTT-210ENST00000512909 RAB11FIP4Q86YS3 637 aa4.91□□□□□ -1.62
HTT-210ENST00000512909 ARHGEF19Q8IW93 802 aa4.91□□□□□ -1.62
HTT-210ENST00000512909 FSTL5Q8N475 847 aaPredicted RBP4.91□□□□□ -1.62
HTT-210ENST00000512909 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.91□□□□□ -1.62
HTT-210ENST00000512909 SPATA5Q8NB90 893 aa4.91□□□□□ -1.62
HTT-210ENST00000512909 SLC30A5Q8TAD4 765 aa4.91□□□□□ -1.62
HTT-210ENST00000512909 PGBD1Q96JS3 809 aa4.91□□□□□ -1.62
HTT-210ENST00000512909 HIST1H2AAQ96QV6 131 aa4.91□□□□□ -1.62
HTT-210ENST00000512909 EIF3CQ99613 913 aaKnown RBP4.91□□□□□ -1.62
HTT-210ENST00000512909 AIFM2Q9BRQ8 373 aa4.91□□□□□ -1.62
HTT-210ENST00000512909 C1QTNF3Q9BXJ4 246 aa4.91□□□□□ -1.62
HTT-210ENST00000512909 WDR12Q9GZL7 423 aaKnown RBP4.91□□□□□ -1.62
HTT-210ENST00000512909 ZBTB26Q9HCK0 441 aa4.91□□□□□ -1.62
HTT-210ENST00000512909 GJB4Q9NTQ9 266 aa4.91□□□□□ -1.62
HTT-210ENST00000512909 CEP72Q9P209 647 aa4.91□□□□□ -1.62
HTT-210ENST00000512909 LRIT1Q9P2V4 623 aa4.91□□□□□ -1.62
HTT-210ENST00000512909 CLTCL1P53675 1640 aa4.9□□□□□ -1.62
HTT-210ENST00000512909 NCOA3Q9Y6Q9 1424 aa4.9□□□□□ -1.62
HTT-210ENST00000512909 TMEM200CA6NKL6 621 aa4.9□□□□□ -1.63
HTT-210ENST00000512909 B8ZZF3 427 aa4.9□□□□□ -1.63
HTT-210ENST00000512909 SLC16A3O15427 465 aaKnown RBP4.9□□□□□ -1.63
HTT-210ENST00000512909 SPDEFO95238 335 aa4.9□□□□□ -1.63
HTT-210ENST00000512909 CHRM2P08172 466 aa4.9□□□□□ -1.63
HTT-210ENST00000512909 ADRB1P08588 477 aa4.9□□□□□ -1.63
HTT-210ENST00000512909 SRGAP2BP0DMP2 458 aa4.9□□□□□ -1.63
HTT-210ENST00000512909 HKR1P10072 659 aa4.9□□□□□ -1.63
HTT-210ENST00000512909 IL1R1P14778 569 aa4.9□□□□□ -1.63
HTT-210ENST00000512909 CD19P15391 556 aa4.9□□□□□ -1.63
HTT-210ENST00000512909 PPP3CBP16298 524 aa4.9□□□□□ -1.63
HTT-210ENST00000512909 KCNA3P22001 575 aa4.9□□□□□ -1.63
HTT-210ENST00000512909 ATICP31939 592 aa4.9□□□□□ -1.63
HTT-210ENST00000512909 MCM7P33993 719 aa4.9□□□□□ -1.63
HTT-210ENST00000512909 PGDP52209 483 aa4.9□□□□□ -1.63
HTT-210ENST00000512909 GPS1Q13098 491 aa4.9□□□□□ -1.63
HTT-210ENST00000512909 BOP1Q14137 746 aaKnown RBP4.9□□□□□ -1.63
HTT-210ENST00000512909 R3HDM1Q15032 1099 aaKnown RBP4.9□□□□□ -1.63
HTT-210ENST00000512909 PUM3Q15397 648 aaKnown RBP4.9□□□□□ -1.63
HTT-210ENST00000512909 TBCCQ15814 346 aa4.9□□□□□ -1.63
HTT-210ENST00000512909 MPEG1Q2M385 716 aa4.9□□□□□ -1.63
HTT-210ENST00000512909 P3H1Q32P28 736 aa4.9□□□□□ -1.63
HTT-210ENST00000512909 FAM153CQ494X1 144 aa4.9□□□□□ -1.63
HTT-210ENST00000512909 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.9□□□□□ -1.63
HTT-210ENST00000512909 MRNIPQ6NTE8 343 aa4.9□□□□□ -1.63
HTT-210ENST00000512909 CRTC1Q6UUV9 634 aa4.9□□□□□ -1.63
HTT-210ENST00000512909 GATAD2AQ86YP4 633 aa4.9□□□□□ -1.63
HTT-210ENST00000512909 ANKRD42Q8N9B4 389 aa4.9□□□□□ -1.63
HTT-210ENST00000512909 SSH3Q8TE77 659 aa4.9□□□□□ -1.63
HTT-210ENST00000512909 TMEM171Q8WVE6 324 aa4.9□□□□□ -1.63
HTT-210ENST00000512909 XAGE5Q8WWM1 108 aa4.9□□□□□ -1.63
HTT-210ENST00000512909 RUBCNQ92622 972 aa4.9□□□□□ -1.63
HTT-210ENST00000512909 FKBP10Q96AY3 582 aa4.9□□□□□ -1.63
HTT-210ENST00000512909 LENG9Q96B70 501 aa4.9□□□□□ -1.63
HTT-210ENST00000512909 PRPF18Q99633 342 aaKnown RBP4.9□□□□□ -1.63
HTT-210ENST00000512909 CDK19Q9BWU1 502 aa4.9□□□□□ -1.63
HTT-210ENST00000512909 STK33Q9BYT3 514 aa4.9□□□□□ -1.63
HTT-210ENST00000512909 INO80BQ9C086 356 aaPredicted RBP4.9□□□□□ -1.63
HTT-210ENST00000512909 SLC25A32Q9H2D1 315 aa4.9□□□□□ -1.63
HTT-210ENST00000512909 GBA2Q9HCG7 927 aaPredicted RBP4.9□□□□□ -1.63
HTT-210ENST00000512909 DNAJB11Q9UBS4 358 aa4.9□□□□□ -1.63
HTT-210ENST00000512909 RGS17Q9UGC6 210 aaPredicted RBP4.9□□□□□ -1.63
HTT-210ENST00000512909 HPSEQ9Y251 543 aa4.9□□□□□ -1.63
HTT-210ENST00000512909 STRCP1A6NGW2 1772 aa4.9□□□□□ -1.63
HTT-210ENST00000512909 SPATA31A6Q5VVP1 1343 aa4.9□□□□□ -1.63
HTT-210ENST00000512909 LRPPRCP42704 1394 aaKnown RBP4.9□□□□□ -1.63
HTT-210ENST00000512909 PLEKHH1Q9ULM0 1364 aa4.9□□□□□ -1.63
HTT-210ENST00000512909 NKTRP30414 1462 aaKnown RBP4.89□□□□□ -1.63
HTT-210ENST00000512909 MYO5BQ9ULV0 1848 aa4.89□□□□□ -1.63
HTT-210ENST00000512909 A0A087WV62 115 aa4.89□□□□□ -1.63
HTT-210ENST00000512909 CCDC78A2IDD5 438 aa4.89□□□□□ -1.63
HTT-210ENST00000512909 FAM234BA2RU67 622 aa4.89□□□□□ -1.63
HTT-210ENST00000512909 GOLGA6L3A6NEY3 463 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms