RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 FBXO32Q969P5 355 aa11.39□□□□□ -0.59
PFDN1-204ENST00000512707 ZNF512Q96ME7 567 aaPredicted RBP11.39□□□□□ -0.59
PFDN1-204ENST00000512707 NCAPGQ9BPX3 1015 aa11.39□□□□□ -0.59
PFDN1-204ENST00000512707 POPDC2Q9HBU9 364 aa11.39□□□□□ -0.59
PFDN1-204ENST00000512707 TLR8Q9NR97 1041 aaKnown RBP11.39□□□□□ -0.59
PFDN1-204ENST00000512707 TMEM30AQ9NV96 361 aa11.39□□□□□ -0.59
PFDN1-204ENST00000512707 TMEM51Q9NW97 253 aa11.39□□□□□ -0.59
PFDN1-204ENST00000512707 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.39□□□□□ -0.59
PFDN1-204ENST00000512707 IP6K2Q9UHH9 426 aa11.39□□□□□ -0.59
PFDN1-204ENST00000512707 STAP1Q9ULZ2 295 aa11.39□□□□□ -0.59
PFDN1-204ENST00000512707 TFR2Q9UP52 801 aa11.39□□□□□ -0.59
PFDN1-204ENST00000512707 SCML2Q9UQR0 700 aa11.39□□□□□ -0.59
PFDN1-204ENST00000512707 TMEM191CA6NGB0 347 aa11.38□□□□□ -0.59
PFDN1-204ENST00000512707 USP27XA6NNY8 438 aa11.38□□□□□ -0.59
PFDN1-204ENST00000512707 TNFRSF10BO14763 440 aa11.38□□□□□ -0.59
PFDN1-204ENST00000512707 CLASP2O75122 1294 aaKnown RBP11.38□□□□□ -0.59
PFDN1-204ENST00000512707 DAB1O75553 588 aa11.38□□□□□ -0.59
PFDN1-204ENST00000512707 SOAT2O75908 522 aa11.38□□□□□ -0.59
PFDN1-204ENST00000512707 MOCS3O95396 460 aa11.38□□□□□ -0.59
PFDN1-204ENST00000512707 VNN2O95498 520 aa11.38□□□□□ -0.59
PFDN1-204ENST00000512707 LTFP02788 710 aa11.38□□□□□ -0.59
PFDN1-204ENST00000512707 HNRNPA1P09651 372 aaKnown RBP eCLIP11.38□□□□□ -0.59
PFDN1-204ENST00000512707 SPATA31D3P0C874 917 aa11.38□□□□□ -0.59
PFDN1-204ENST00000512707 ATF6P18850 670 aa11.38□□□□□ -0.59
PFDN1-204ENST00000512707 HOXA9P31269 272 aa11.38□□□□□ -0.59
PFDN1-204ENST00000512707 SDC4P31431 198 aa11.38□□□□□ -0.59
PFDN1-204ENST00000512707 PPP3CCP48454 512 aa11.38□□□□□ -0.59
PFDN1-204ENST00000512707 GPR15P49685 360 aa11.38□□□□□ -0.59
PFDN1-204ENST00000512707 CAMK1Q14012 370 aa11.38□□□□□ -0.59
PFDN1-204ENST00000512707 PIGHQ14442 188 aaPredicted RBP11.38□□□□□ -0.59
PFDN1-204ENST00000512707 SDHAF4Q5VUM1 108 aa11.38□□□□□ -0.59
PFDN1-204ENST00000512707 BTBD8Q5XKL5 378 aa11.38□□□□□ -0.59
PFDN1-204ENST00000512707 PM20D1Q6GTS8 502 aa11.38□□□□□ -0.59
PFDN1-204ENST00000512707 C11orf63Q6NUN7 778 aa11.38□□□□□ -0.59
PFDN1-204ENST00000512707 SPATA31D4Q6ZUB0 917 aa11.38□□□□□ -0.59
PFDN1-204ENST00000512707 GPRIN1Q7Z2K8 1008 aa11.38□□□□□ -0.59
PFDN1-204ENST00000512707 TADA2BQ86TJ2 420 aa11.38□□□□□ -0.59
PFDN1-204ENST00000512707 RBM23Q86U06 439 aaKnown RBP11.38□□□□□ -0.59
PFDN1-204ENST00000512707 MON1AQ86VX9 555 aa11.38□□□□□ -0.59
PFDN1-204ENST00000512707 C17orf53Q8N3J3 647 aaPredicted RBP11.38□□□□□ -0.59
PFDN1-204ENST00000512707 FNIP1Q8TF40 1166 aa11.38□□□□□ -0.59
PFDN1-204ENST00000512707 GIPC2Q8TF65 315 aa11.38□□□□□ -0.59
PFDN1-204ENST00000512707 OVCA2Q8WZ82 227 aa11.38□□□□□ -0.59
PFDN1-204ENST00000512707 TRMT2BQ96GJ1 504 aaKnown RBP11.38□□□□□ -0.59
PFDN1-204ENST00000512707 GCNAQ96QF7 691 aa11.38□□□□□ -0.59
PFDN1-204ENST00000512707 CDK5RAP1Q96SZ6 601 aaKnown RBP11.38□□□□□ -0.59
PFDN1-204ENST00000512707 TTYH1Q9H313 450 aaPredicted RBP11.38□□□□□ -0.59
PFDN1-204ENST00000512707 CRISPLD1Q9H336 500 aa11.38□□□□□ -0.59
PFDN1-204ENST00000512707 NSUN3Q9H649 340 aaKnown RBP11.38□□□□□ -0.59
PFDN1-204ENST00000512707 MAN1C1Q9NR34 630 aa11.38□□□□□ -0.59
PFDN1-204ENST00000512707 ABCC13Q9NSE7 274 aa11.38□□□□□ -0.59
PFDN1-204ENST00000512707 DZANK1Q9NVP4 752 aa11.38□□□□□ -0.59
PFDN1-204ENST00000512707 RRN3Q9NYV6 651 aa11.38□□□□□ -0.59
PFDN1-204ENST00000512707 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.38□□□□□ -0.59
PFDN1-204ENST00000512707 LMCD1Q9NZU5 365 aa11.38□□□□□ -0.59
PFDN1-204ENST00000512707 TJP2Q9UDY2 1190 aa11.38□□□□□ -0.59
PFDN1-204ENST00000512707 TRIM10Q9UDY6 481 aa11.38□□□□□ -0.59
PFDN1-204ENST00000512707 MAGED2Q9UNF1 606 aaPredicted RBP11.38□□□□□ -0.59
PFDN1-204ENST00000512707 PAXBP1Q9Y5B6 917 aa11.38□□□□□ -0.59
PFDN1-204ENST00000512707 PCDHGC5Q9Y5F6 944 aa11.38□□□□□ -0.59
PFDN1-204ENST00000512707 USP3Q9Y6I4 520 aa11.38□□□□□ -0.59
PFDN1-204ENST00000512707 DUSP10Q9Y6W6 482 aa11.38□□□□□ -0.59
PFDN1-204ENST00000512707 MYO9BQ13459 2157 aa11.38□□□□□ -0.59
PFDN1-204ENST00000512707 NCOR1O75376 2440 aa11.38□□□□□ -0.59
PFDN1-204ENST00000512707 SPOPO43791 374 aa11.37□□□□□ -0.59
PFDN1-204ENST00000512707 ZMYND10O75800 440 aa11.37□□□□□ -0.59
PFDN1-204ENST00000512707 RNF8O76064 485 aa11.37□□□□□ -0.59
PFDN1-204ENST00000512707 RALAP11233 206 aa11.37□□□□□ -0.59
PFDN1-204ENST00000512707 PDGFRAP16234 1089 aa11.37□□□□□ -0.59
PFDN1-204ENST00000512707 GPD1P21695 349 aa11.37□□□□□ -0.59
PFDN1-204ENST00000512707 PSMA2P25787 234 aa11.37□□□□□ -0.59
PFDN1-204ENST00000512707 SLC1A1P43005 524 aa11.37□□□□□ -0.59
PFDN1-204ENST00000512707 NRIP1P48552 1158 aa11.37□□□□□ -0.59
PFDN1-204ENST00000512707 GNG11P61952 73 aa11.37□□□□□ -0.59
PFDN1-204ENST00000512707 YWHAGP61981 247 aaKnown RBP eCLIP11.37□□□□□ -0.59
PFDN1-204ENST00000512707 MESDQ14696 234 aa11.37□□□□□ -0.59
PFDN1-204ENST00000512707 ACAP1Q15027 740 aa11.37□□□□□ -0.59
PFDN1-204ENST00000512707 DUSP6Q16828 381 aa11.37□□□□□ -0.59
PFDN1-204ENST00000512707 PABPC1LQ4VXU2 614 aaKnown RBP11.37□□□□□ -0.59
PFDN1-204ENST00000512707 ZNF569Q5MCW4 686 aa11.37□□□□□ -0.59
PFDN1-204ENST00000512707 PPP1R15BQ5SWA1 713 aa11.37□□□□□ -0.59
PFDN1-204ENST00000512707 RSRC2Q7L4I2 434 aaKnown RBP11.37□□□□□ -0.59
PFDN1-204ENST00000512707 BEND5Q7L4P6 421 aa11.37□□□□□ -0.59
PFDN1-204ENST00000512707 STKLD1Q8NE28 680 aa11.37□□□□□ -0.59
PFDN1-204ENST00000512707 TPCN2Q8NHX9 752 aa11.37□□□□□ -0.59
PFDN1-204ENST00000512707 SCAMP5Q8TAC9 235 aa11.37□□□□□ -0.59
PFDN1-204ENST00000512707 GPR152Q8TDT2 470 aa11.37□□□□□ -0.59
PFDN1-204ENST00000512707 CLEC4CQ8WTT0 213 aa11.37□□□□□ -0.59
PFDN1-204ENST00000512707 RNF139Q8WU17 664 aa11.37□□□□□ -0.59
PFDN1-204ENST00000512707 MYLIPQ8WY64 445 aa11.37□□□□□ -0.59
PFDN1-204ENST00000512707 CASP10Q92851 521 aa11.37□□□□□ -0.59
PFDN1-204ENST00000512707 PSMG2Q969U7 264 aa11.37□□□□□ -0.59
PFDN1-204ENST00000512707 CNPY3Q9BT09 278 aa11.37□□□□□ -0.59
PFDN1-204ENST00000512707 TTLL2Q9BWV7 592 aa11.37□□□□□ -0.59
PFDN1-204ENST00000512707 OSGEPQ9NPF4 335 aa11.37□□□□□ -0.59
PFDN1-204ENST00000512707 OLA1Q9NTK5 396 aaKnown RBP11.37□□□□□ -0.59
PFDN1-204ENST00000512707 ZDHHC7Q9NXF8 308 aa11.37□□□□□ -0.59
PFDN1-204ENST00000512707 TRPM5Q9NZQ8 1165 aa11.37□□□□□ -0.59
PFDN1-204ENST00000512707 CHORDC1Q9UHD1 332 aaPredicted RBP11.37□□□□□ -0.59
PFDN1-204ENST00000512707 PTPRDP23468 1912 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms