RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 SLC39A2Q9NP94 309 aa13.32□□□□□ -0.28
VEGFA-216ENST00000512683 DMAC2Q9NW81 257 aa13.32□□□□□ -0.28
VEGFA-216ENST00000512683 SMPD4Q9NXE4 827 aa13.32□□□□□ -0.28
VEGFA-216ENST00000512683 WDR35Q9P2L0 1181 aa13.32□□□□□ -0.28
VEGFA-216ENST00000512683 CHORDC1Q9UHD1 332 aaPredicted RBP13.32□□□□□ -0.28
VEGFA-216ENST00000512683 SERTAD1Q9UHV2 236 aa13.32□□□□□ -0.28
VEGFA-216ENST00000512683 NME7Q9Y5B8 376 aa13.32□□□□□ -0.28
VEGFA-216ENST00000512683 CEP295Q9C0D2 2601 aa13.32□□□□□ -0.28
VEGFA-216ENST00000512683 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.31□□□□□ -0.28
VEGFA-216ENST00000512683 TMEM8BA6NDV4 472 aa13.31□□□□□ -0.28
VEGFA-216ENST00000512683 SGK1O00141 431 aa13.31□□□□□ -0.28
VEGFA-216ENST00000512683 AP5Z1O43299 807 aa13.31□□□□□ -0.28
VEGFA-216ENST00000512683 ZNF217O75362 1048 aa13.31□□□□□ -0.28
VEGFA-216ENST00000512683 CMA1P23946 247 aa13.31□□□□□ -0.28
VEGFA-216ENST00000512683 TIE1P35590 1138 aa13.31□□□□□ -0.28
VEGFA-216ENST00000512683 DHPSP49366 369 aaPredicted RBP13.31□□□□□ -0.28
VEGFA-216ENST00000512683 SLC5A3P53794 718 aa13.31□□□□□ -0.28
VEGFA-216ENST00000512683 CACNA2D1P54289 1103 aa13.31□□□□□ -0.28
VEGFA-216ENST00000512683 ENPEPQ07075 957 aa13.31□□□□□ -0.28
VEGFA-216ENST00000512683 GOLGA8FQ08AF8 430 aa13.31□□□□□ -0.28
VEGFA-216ENST00000512683 GOLGA8DPQ0D2H9 430 aa13.31□□□□□ -0.28
VEGFA-216ENST00000512683 BIRC3Q13489 604 aa13.31□□□□□ -0.28
VEGFA-216ENST00000512683 NCOA4Q13772 614 aa13.31□□□□□ -0.28
VEGFA-216ENST00000512683 HNRNPDQ14103 355 aaKnown RBP13.31□□□□□ -0.28
VEGFA-216ENST00000512683 ZNF699Q32M78 642 aa13.31□□□□□ -0.28
VEGFA-216ENST00000512683 MAP7D1Q3KQU3 841 aa13.31□□□□□ -0.28
VEGFA-216ENST00000512683 PEAR1Q5VY43 1037 aaPredicted RBP13.31□□□□□ -0.28
VEGFA-216ENST00000512683 TCEAL6Q6IPX3 200 aa13.31□□□□□ -0.28
VEGFA-216ENST00000512683 SDE2Q6IQ49 451 aa13.31□□□□□ -0.28
VEGFA-216ENST00000512683 SLC23A3Q6PIS1 610 aa13.31□□□□□ -0.28
VEGFA-216ENST00000512683 PAQR9Q6ZVX9 377 aa13.31□□□□□ -0.28
VEGFA-216ENST00000512683 NELFCDQ8IXH7 590 aa13.31□□□□□ -0.28
VEGFA-216ENST00000512683 TMC2Q8TDI7 906 aa13.31□□□□□ -0.28
VEGFA-216ENST00000512683 PIGKQ92643 395 aa13.31□□□□□ -0.28
VEGFA-216ENST00000512683 TCEAL3Q969E4 200 aa13.31□□□□□ -0.28
VEGFA-216ENST00000512683 PAGE5Q96GU1 130 aa13.31□□□□□ -0.28
VEGFA-216ENST00000512683 ZFRQ96KR1 1074 aaKnown RBP13.31□□□□□ -0.28
VEGFA-216ENST00000512683 XPO6Q96QU8 1125 aaKnown RBP13.31□□□□□ -0.28
VEGFA-216ENST00000512683 KCNK16Q96T55 309 aa13.31□□□□□ -0.28
VEGFA-216ENST00000512683 MED10Q9BTT4 135 aa13.31□□□□□ -0.28
VEGFA-216ENST00000512683 GZF1Q9H116 711 aaPredicted RBP13.31□□□□□ -0.28
VEGFA-216ENST00000512683 DPEP3Q9H4B8 488 aa13.31□□□□□ -0.28
VEGFA-216ENST00000512683 PNPLA8Q9NP80 782 aa13.31□□□□□ -0.28
VEGFA-216ENST00000512683 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.31□□□□□ -0.285e-6■■□□□ 13
VEGFA-216ENST00000512683 TLR8Q9NR97 1041 aaKnown RBP13.31□□□□□ -0.28
VEGFA-216ENST00000512683 SPHK2Q9NRA0 654 aa13.31□□□□□ -0.28
VEGFA-216ENST00000512683 USP25Q9UHP3 1055 aa13.31□□□□□ -0.28
VEGFA-216ENST00000512683 HPSEQ9Y251 543 aa13.31□□□□□ -0.28
VEGFA-216ENST00000512683 A0A1B0GVL5 298 aa13.3□□□□□ -0.28
VEGFA-216ENST00000512683 GFRA2O00451 464 aa13.3□□□□□ -0.28
VEGFA-216ENST00000512683 CLDN5O00501 218 aa13.3□□□□□ -0.28
VEGFA-216ENST00000512683 PDXKO00764 312 aa13.3□□□□□ -0.28
VEGFA-216ENST00000512683 NPC1O15118 1278 aa13.3□□□□□ -0.28
VEGFA-216ENST00000512683 MAPK13O15264 365 aa13.3□□□□□ -0.28
VEGFA-216ENST00000512683 ADAM23O75077 832 aa13.3□□□□□ -0.28
VEGFA-216ENST00000512683 TULP3O75386 442 aa13.3□□□□□ -0.28
VEGFA-216ENST00000512683 KIF20AO95235 890 aa13.3□□□□□ -0.28
VEGFA-216ENST00000512683 PFKFB1P16118 471 aa13.3□□□□□ -0.28
VEGFA-216ENST00000512683 NTSR1P30989 418 aa13.3□□□□□ -0.28
VEGFA-216ENST00000512683 RDXP35241 583 aaKnown RBP13.3□□□□□ -0.28
VEGFA-216ENST00000512683 ZNF132P52740 706 aa13.3□□□□□ -0.28
VEGFA-216ENST00000512683 TRIM61Q5EBN2 209 aa13.3□□□□□ -0.28
VEGFA-216ENST00000512683 SH3PXD2AQ5TCZ1 1133 aa13.3□□□□□ -0.28
VEGFA-216ENST00000512683 TADA2BQ86TJ2 420 aa13.3□□□□□ -0.28
VEGFA-216ENST00000512683 FAM35AQ86V20 835 aa13.3□□□□□ -0.28
VEGFA-216ENST00000512683 CEP57L1Q8IYX8 460 aa13.3□□□□□ -0.28
VEGFA-216ENST00000512683 PHTF2Q8N3S3 785 aa13.3□□□□□ -0.28
VEGFA-216ENST00000512683 TERB1Q8NA31 727 aa13.3□□□□□ -0.28
VEGFA-216ENST00000512683 KDF1Q8NAX2 398 aaPredicted RBP13.3□□□□□ -0.28
VEGFA-216ENST00000512683 SCAMP5Q8TAC9 235 aa13.3□□□□□ -0.28
VEGFA-216ENST00000512683 FAXDC2Q96IV6 333 aa13.3□□□□□ -0.28
VEGFA-216ENST00000512683 NACA2Q9H009 215 aa13.3□□□□□ -0.28
VEGFA-216ENST00000512683 TMEM30AQ9NV96 361 aa13.3□□□□□ -0.28
VEGFA-216ENST00000512683 MARK1Q9P0L2 795 aa13.3□□□□□ -0.28
VEGFA-216ENST00000512683 BCCIPQ9P287 314 aaKnown RBP eCLIP13.3□□□□□ -0.28
VEGFA-216ENST00000512683 SLC6A14Q9UN76 642 aa13.3□□□□□ -0.28
VEGFA-216ENST00000512683 INVSQ9Y283 1065 aa13.3□□□□□ -0.28
VEGFA-216ENST00000512683 MAP1BP46821 2468 aaKnown RBP13.3□□□□□ -0.28
VEGFA-216ENST00000512683 HELZP42694 1942 aaKnown RBP13.29□□□□□ -0.28
VEGFA-216ENST00000512683 FAM237AA0A1B0GTK4 181 aa13.29□□□□□ -0.28
VEGFA-216ENST00000512683 TLR5O60602 858 aa13.29□□□□□ -0.28
VEGFA-216ENST00000512683 AP1G2O75843 785 aa13.29□□□□□ -0.28
VEGFA-216ENST00000512683 HNRNPLP14866 589 aaKnown RBP eCLIP13.29□□□□□ -0.28
VEGFA-216ENST00000512683 BCKDHBP21953 392 aa13.29□□□□□ -0.28
VEGFA-216ENST00000512683 ATP5C1P36542 298 aaKnown RBP13.29□□□□□ -0.28
VEGFA-216ENST00000512683 PSEN1P49768 467 aa13.29□□□□□ -0.28
VEGFA-216ENST00000512683 CDH8P55286 799 aa13.29□□□□□ -0.28
VEGFA-216ENST00000512683 STK4Q13043 487 aa13.29□□□□□ -0.28
VEGFA-216ENST00000512683 DUOXA1Q1HG43 343 aa13.29□□□□□ -0.28
VEGFA-216ENST00000512683 ZACNQ401N2 412 aa13.29□□□□□ -0.28
VEGFA-216ENST00000512683 EMC10Q5UCC4 262 aa13.29□□□□□ -0.28
VEGFA-216ENST00000512683 LYSMD4Q5XG99 296 aa13.29□□□□□ -0.28
VEGFA-216ENST00000512683 TTC30AQ86WT1 665 aa13.29□□□□□ -0.28
VEGFA-216ENST00000512683 FUKQ8N0W3 1084 aa13.29□□□□□ -0.28
VEGFA-216ENST00000512683 PGBD3Q8N328 593 aa13.29□□□□□ -0.28
VEGFA-216ENST00000512683 ZNF513Q8N8E2 541 aaPredicted RBP13.29□□□□□ -0.28
VEGFA-216ENST00000512683 KIAA0895Q8NCT3 520 aa13.29□□□□□ -0.28
VEGFA-216ENST00000512683 SPATA32Q96LK8 384 aa13.29□□□□□ -0.28
VEGFA-216ENST00000512683 CYP3A43Q9HB55 503 aa13.29□□□□□ -0.28
VEGFA-216ENST00000512683 CYLDQ9NQC7 956 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms