RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 GLE1Q53GS7 698 aaKnown RBP8.48□□□□□ -1.05
HTT-209ENST00000512068 EFHC1Q5JVL4 640 aa8.48□□□□□ -1.05
HTT-209ENST00000512068 ZNF280DQ6N043 979 aa8.48□□□□□ -1.05
HTT-209ENST00000512068 LLGL2Q6P1M3 1020 aa8.48□□□□□ -1.05
HTT-209ENST00000512068 CC2D1AQ6P1N0 951 aaPredicted RBP8.48□□□□□ -1.05
HTT-209ENST00000512068 FAM183BPQ6ZVS7 135 aa8.48□□□□□ -1.05
HTT-209ENST00000512068 RSRC2Q7L4I2 434 aaKnown RBP8.48□□□□□ -1.05
HTT-209ENST00000512068 ZNF572Q7Z3I7 529 aaPredicted RBP8.48□□□□□ -1.05
HTT-209ENST00000512068 LIMS2Q7Z4I7 341 aa8.48□□□□□ -1.05
HTT-209ENST00000512068 TRIM46Q7Z4K8 759 aa8.48□□□□□ -1.05
HTT-209ENST00000512068 FAM35AQ86V20 835 aa8.48□□□□□ -1.05
HTT-209ENST00000512068 TTC30AQ86WT1 665 aa8.48□□□□□ -1.05
HTT-209ENST00000512068 CEP57Q86XR8 500 aa8.48□□□□□ -1.05
HTT-209ENST00000512068 SPATA2LQ8IUW3 424 aaPredicted RBP8.48□□□□□ -1.05
HTT-209ENST00000512068 LRRN4CLQ8ND94 238 aa8.48□□□□□ -1.05
HTT-209ENST00000512068 C3orf58Q8NDZ4 430 aa8.48□□□□□ -1.05
HTT-209ENST00000512068 CCDC26Q8TAB7 109 aa8.48□□□□□ -1.05
HTT-209ENST00000512068 MYCBPAPQ8TBZ2 947 aa8.48□□□□□ -1.05
HTT-209ENST00000512068 FNIP1Q8TF40 1166 aa8.48□□□□□ -1.05
HTT-209ENST00000512068 CLP1Q92989 425 aaKnown RBP8.48□□□□□ -1.05
HTT-209ENST00000512068 MCRS1Q96EZ8 462 aa8.48□□□□□ -1.05
HTT-209ENST00000512068 MS4A14Q96JA4 679 aa8.48□□□□□ -1.05
HTT-209ENST00000512068 RUNDC3BQ96NL0 473 aa8.48□□□□□ -1.05
HTT-209ENST00000512068 PAAF1Q9BRP4 392 aa8.48□□□□□ -1.05
HTT-209ENST00000512068 TMEM175Q9BSA9 504 aa8.48□□□□□ -1.05
HTT-209ENST00000512068 CYTH4Q9UIA0 394 aa8.48□□□□□ -1.05
HTT-209ENST00000512068 RASAL2Q9UJF2 1139 aa8.48□□□□□ -1.05
HTT-209ENST00000512068 ADAM28Q9UKQ2 775 aa8.48□□□□□ -1.05
HTT-209ENST00000512068 TBX21Q9UL17 535 aa8.48□□□□□ -1.05
HTT-209ENST00000512068 PCDHA3Q9Y5H8 950 aa8.48□□□□□ -1.05
HTT-209ENST00000512068 TET1Q8NFU7 2136 aa8.48□□□□□ -1.05
HTT-209ENST00000512068 FNDC1Q4ZHG4 1894 aaPredicted RBP8.47□□□□□ -1.05
HTT-209ENST00000512068 A6NJY4 79 aa8.47□□□□□ -1.05
HTT-209ENST00000512068 H7C4K7 107 aa8.47□□□□□ -1.05
HTT-209ENST00000512068 HCRTO43612 131 aa8.47□□□□□ -1.05
HTT-209ENST00000512068 DDHD2O94830 711 aa8.47□□□□□ -1.05
HTT-209ENST00000512068 GJB6O95452 261 aa8.47□□□□□ -1.05
HTT-209ENST00000512068 TIMP1P01033 207 aa8.47□□□□□ -1.05
HTT-209ENST00000512068 BMP2P12643 396 aa8.47□□□□□ -1.05
HTT-209ENST00000512068 PDGFRAP16234 1089 aa8.47□□□□□ -1.05
HTT-209ENST00000512068 SCNN1AP37088 669 aa8.47□□□□□ -1.05
HTT-209ENST00000512068 ALDH7A1P49419 539 aaKnown RBP8.47□□□□□ -1.05
HTT-209ENST00000512068 RNF144AP50876 292 aaPredicted RBP8.47□□□□□ -1.05
HTT-209ENST00000512068 MAP3K7CLP57077 242 aa8.47□□□□□ -1.05
HTT-209ENST00000512068 RPL7AP62424 266 aaKnown RBP8.47□□□□□ -1.05
HTT-209ENST00000512068 NFE2Q16621 373 aaPredicted RBP8.47□□□□□ -1.05
HTT-209ENST00000512068 LRRC26Q2I0M4 334 aa8.47□□□□□ -1.05
HTT-209ENST00000512068 LRRC38Q5VT99 294 aa8.47□□□□□ -1.05
HTT-209ENST00000512068 PMF1Q6P1K2 205 aa8.47□□□□□ -1.05
HTT-209ENST00000512068 ZNF280BQ86YH2 543 aa8.47□□□□□ -1.05
HTT-209ENST00000512068 KLHL7Q8IXQ5 586 aa8.47□□□□□ -1.05
HTT-209ENST00000512068 RASGEF1CQ8N431 466 aa8.47□□□□□ -1.05
HTT-209ENST00000512068 MMGT1Q8N4V1 131 aa8.47□□□□□ -1.05
HTT-209ENST00000512068 NIPA2Q8N8Q9 360 aa8.47□□□□□ -1.05
HTT-209ENST00000512068 SLC35F5Q8WV83 523 aa8.47□□□□□ -1.05
HTT-209ENST00000512068 RUBCNQ92622 972 aa8.47□□□□□ -1.05
HTT-209ENST00000512068 KRT35Q92764 455 aa8.47□□□□□ -1.05
HTT-209ENST00000512068 MYLPFQ96A32 169 aa8.47□□□□□ -1.05
HTT-209ENST00000512068 FAM149B1Q96BN6 582 aa8.47□□□□□ -1.05
HTT-209ENST00000512068 CASD1Q96PB1 797 aa8.47□□□□□ -1.05
HTT-209ENST00000512068 INSM2Q96T92 566 aaPredicted RBP8.47□□□□□ -1.05
HTT-209ENST00000512068 HINFPQ9BQA5 517 aa8.47□□□□□ -1.05
HTT-209ENST00000512068 TRIM62Q9BVG3 475 aa8.47□□□□□ -1.05
HTT-209ENST00000512068 NRDE2Q9H7Z3 1164 aa8.47□□□□□ -1.05
HTT-209ENST00000512068 DMAP1Q9NPF5 467 aaPredicted RBP8.47□□□□□ -1.05
HTT-209ENST00000512068 SCHIP1Q9P0W5 487 aaPredicted RBP8.47□□□□□ -1.05
HTT-209ENST00000512068 TTC7AQ9ULT0 858 aaPredicted RBP8.47□□□□□ -1.05
HTT-209ENST00000512068 STAP1Q9ULZ2 295 aa8.47□□□□□ -1.05
HTT-209ENST00000512068 KIAA0100Q14667 2235 aaKnown RBP8.46□□□□□ -1.05
HTT-209ENST00000512068 TARSL2A2RTX5 802 aaKnown RBP8.46□□□□□ -1.06
HTT-209ENST00000512068 OR6C75A6NL08 312 aa8.46□□□□□ -1.06
HTT-209ENST00000512068 PDE2AO00408 941 aaPredicted RBP8.46□□□□□ -1.06
HTT-209ENST00000512068 CLDN5O00501 218 aa8.46□□□□□ -1.06
HTT-209ENST00000512068 NRP1O14786 923 aa8.46□□□□□ -1.06
HTT-209ENST00000512068 CAPN9O14815 690 aa8.46□□□□□ -1.06
HTT-209ENST00000512068 ST8SIA5O15466 376 aa8.46□□□□□ -1.06
HTT-209ENST00000512068 PRPSAP2O60256 369 aa8.46□□□□□ -1.06
HTT-209ENST00000512068 HSF2BPO75031 334 aa8.46□□□□□ -1.06
HTT-209ENST00000512068 ATP2C2O75185 946 aa8.46□□□□□ -1.06
HTT-209ENST00000512068 GRAP2O75791 330 aa8.46□□□□□ -1.06
HTT-209ENST00000512068 BAIAP3O94812 1187 aa8.46□□□□□ -1.06
HTT-209ENST00000512068 ZRANB2O95218 330 aaKnown RBP eCLIP8.46□□□□□ -1.06
HTT-209ENST00000512068 BMP1P13497 986 aa8.46□□□□□ -1.06
HTT-209ENST00000512068 CPB1P15086 417 aa8.46□□□□□ -1.06
HTT-209ENST00000512068 TKTP29401 623 aaKnown RBP8.46□□□□□ -1.06
HTT-209ENST00000512068 RFC1P35251 1148 aaPredicted RBP8.46□□□□□ -1.06
HTT-209ENST00000512068 ZNF143P52747 638 aaPredicted RBP8.46□□□□□ -1.06
HTT-209ENST00000512068 BCAR1P56945 870 aa8.46□□□□□ -1.06
HTT-209ENST00000512068 FOXK2Q01167 660 aa8.46□□□□□ -1.06
HTT-209ENST00000512068 ADIGQ0VDE8 80 aa8.46□□□□□ -1.06
HTT-209ENST00000512068 PPIGQ13427 754 aaKnown RBP eCLIP8.46□□□□□ -1.065e-8■□□□□ 11
HTT-209ENST00000512068 CDO1Q16878 200 aa8.46□□□□□ -1.06
HTT-209ENST00000512068 CTXN3Q4LDR2 81 aa8.46□□□□□ -1.06
HTT-209ENST00000512068 FAM171A1Q5VUB5 890 aa8.46□□□□□ -1.06
HTT-209ENST00000512068 MFSD5Q6N075 450 aa8.46□□□□□ -1.06
HTT-209ENST00000512068 FUT10Q6P4F1 479 aa8.46□□□□□ -1.06
HTT-209ENST00000512068 TMCO3Q6UWJ1 677 aa8.46□□□□□ -1.06
HTT-209ENST00000512068 MAATS1Q7Z4T9 603 aa8.46□□□□□ -1.06
HTT-209ENST00000512068 TMEM110Q86TL2 294 aa8.46□□□□□ -1.06
HTT-209ENST00000512068 PIGZQ86VD9 579 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms