RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 TMEM196Q5HYL7 178 aa6.18□□□□□ -1.42
RNF4-217ENST00000511892 DGKKQ5KSL6 1271 aa6.18□□□□□ -1.42
RNF4-217ENST00000511892 CC2D1AQ6P1N0 951 aaPredicted RBP6.18□□□□□ -1.42
RNF4-217ENST00000511892 SASS6Q6UVJ0 657 aa6.18□□□□□ -1.42
RNF4-217ENST00000511892 INTS8Q75QN2 995 aaKnown RBP6.18□□□□□ -1.42
RNF4-217ENST00000511892 FAM35AQ86V20 835 aa6.18□□□□□ -1.42
RNF4-217ENST00000511892 ZC3H3Q8IXZ2 948 aaKnown RBP6.18□□□□□ -1.42
RNF4-217ENST00000511892 FAM186BQ8IYM0 893 aa6.18□□□□□ -1.42
RNF4-217ENST00000511892 NUP93Q8N1F7 819 aa6.18□□□□□ -1.42
RNF4-217ENST00000511892 CRYBG2Q8N1P7 616 aa6.18□□□□□ -1.42
RNF4-217ENST00000511892 SYNPOQ8N3V7 929 aa6.18□□□□□ -1.42
RNF4-217ENST00000511892 SPEM1Q8N4L4 309 aa6.18□□□□□ -1.42
RNF4-217ENST00000511892 DCLK2Q8N568 766 aa6.18□□□□□ -1.42
RNF4-217ENST00000511892 C12orf29Q8N999 325 aa6.18□□□□□ -1.42
RNF4-217ENST00000511892 ZMIZ2Q8NF64 920 aa6.18□□□□□ -1.42
RNF4-217ENST00000511892 SCAMP5Q8TAC9 235 aa6.18□□□□□ -1.42
RNF4-217ENST00000511892 SPATA20Q8TB22 786 aa6.18□□□□□ -1.42
RNF4-217ENST00000511892 TAS1R2Q8TE23 839 aa6.18□□□□□ -1.42
RNF4-217ENST00000511892 SH3RF2Q8TEC5 729 aa6.18□□□□□ -1.42
RNF4-217ENST00000511892 WHAMMQ8TF30 809 aa6.18□□□□□ -1.42
RNF4-217ENST00000511892 ATRIPQ8WXE1 791 aa6.18□□□□□ -1.42
RNF4-217ENST00000511892 TAF4BQ92750 862 aa6.18□□□□□ -1.42
RNF4-217ENST00000511892 EZH1Q92800 747 aaPredicted RBP6.18□□□□□ -1.42
RNF4-217ENST00000511892 SEMA4DQ92854 862 aa6.18□□□□□ -1.42
RNF4-217ENST00000511892 CCDC47Q96A33 483 aaKnown RBP6.18□□□□□ -1.42
RNF4-217ENST00000511892 EEF2KMTQ96G04 330 aa6.18□□□□□ -1.42
RNF4-217ENST00000511892 PDLIM2Q96JY6 352 aa6.18□□□□□ -1.42
RNF4-217ENST00000511892 SMOQ99835 787 aa6.18□□□□□ -1.42
RNF4-217ENST00000511892 FAM126AQ9BYI3 521 aaPredicted RBP6.18□□□□□ -1.42
RNF4-217ENST00000511892 EPC1Q9H2F5 836 aa6.18□□□□□ -1.42
RNF4-217ENST00000511892 LINC00597Q9H2U6 94 aa6.18□□□□□ -1.42
RNF4-217ENST00000511892 ECT2Q9H8V3 914 aa6.18□□□□□ -1.42
RNF4-217ENST00000511892 DUS2Q9NX74 493 aaKnown RBP6.18□□□□□ -1.42
RNF4-217ENST00000511892 TRPM5Q9NZQ8 1165 aa6.18□□□□□ -1.42
RNF4-217ENST00000511892 HOOK1Q9UJC3 728 aaKnown RBP6.18□□□□□ -1.42
RNF4-217ENST00000511892 ADGRG1Q9Y653 693 aa6.18□□□□□ -1.42
RNF4-217ENST00000511892 WNT6Q9Y6F9 365 aa6.18□□□□□ -1.42
RNF4-217ENST00000511892 GON4LQ3T8J9 2241 aa6.18□□□□□ -1.42
RNF4-217ENST00000511892 CNOT1A5YKK6 2376 aaKnown RBP6.17□□□□□ -1.42
RNF4-217ENST00000511892 WDFY3Q8IZQ1 3526 aa6.17□□□□□ -1.42
RNF4-217ENST00000511892 FAM92AA1XBS5 289 aa6.17□□□□□ -1.42
RNF4-217ENST00000511892 ANTXRLA6NF34 631 aa6.17□□□□□ -1.42
RNF4-217ENST00000511892 CHURC1-FNTBB4DL54 471 aa6.17□□□□□ -1.42
RNF4-217ENST00000511892 AP1G2O75843 785 aa6.17□□□□□ -1.42
RNF4-217ENST00000511892 ABL1P00519 1130 aa6.17□□□□□ -1.42
RNF4-217ENST00000511892 ZDHHC11BP0C7U3 371 aa6.17□□□□□ -1.42
RNF4-217ENST00000511892 KRT13P13646 458 aa6.17□□□□□ -1.42
RNF4-217ENST00000511892 P4HA1P13674 534 aa6.17□□□□□ -1.42
RNF4-217ENST00000511892 CCDC130P13994 396 aa6.17□□□□□ -1.42
RNF4-217ENST00000511892 RPL13P26373 211 aaKnown RBP6.17□□□□□ -1.42
RNF4-217ENST00000511892 YWHAQP27348 245 aa6.17□□□□□ -1.42
RNF4-217ENST00000511892 GTF2H1P32780 548 aa6.17□□□□□ -1.42
RNF4-217ENST00000511892 PSMC2P35998 433 aaKnown RBP6.17□□□□□ -1.42
RNF4-217ENST00000511892 PIK3CAP42336 1068 aa6.17□□□□□ -1.42
RNF4-217ENST00000511892 PPP3CCP48454 512 aa6.17□□□□□ -1.42
RNF4-217ENST00000511892 FNTBP49356 437 aa6.17□□□□□ -1.42
RNF4-217ENST00000511892 PMS1P54277 932 aaKnown RBP6.17□□□□□ -1.42
RNF4-217ENST00000511892 SLC7A9P82251 487 aa6.17□□□□□ -1.42
RNF4-217ENST00000511892 TYRO3Q06418 890 aa6.17□□□□□ -1.42
RNF4-217ENST00000511892 INCA1Q0VD86 236 aa6.17□□□□□ -1.42
RNF4-217ENST00000511892 COBLL1Q53SF7 1204 aa6.17□□□□□ -1.42
RNF4-217ENST00000511892 ZNF658Q5TYW1 1059 aaPredicted RBP6.17□□□□□ -1.42
RNF4-217ENST00000511892 SNX30Q5VWJ9 437 aa6.17□□□□□ -1.42
RNF4-217ENST00000511892 ANKRD40Q6AI12 368 aa6.17□□□□□ -1.42
RNF4-217ENST00000511892 UNC93AQ86WB7 457 aa6.17□□□□□ -1.42
RNF4-217ENST00000511892 KIAA2013Q8IYS2 634 aa6.17□□□□□ -1.42
RNF4-217ENST00000511892 TTC16Q8NEE8 873 aa6.17□□□□□ -1.42
RNF4-217ENST00000511892 SLC2A14Q8TDB8 520 aa6.17□□□□□ -1.42
RNF4-217ENST00000511892 TRIM44Q96DX7 344 aaPredicted RBP6.17□□□□□ -1.42
RNF4-217ENST00000511892 SMARCD1Q96GM5 515 aa6.17□□□□□ -1.42
RNF4-217ENST00000511892 TNIP3Q96KP6 325 aa6.17□□□□□ -1.42
RNF4-217ENST00000511892 MED10Q9BTT4 135 aa6.17□□□□□ -1.42
RNF4-217ENST00000511892 SLC6A16Q9GZN6 736 aa6.17□□□□□ -1.42
RNF4-217ENST00000511892 MMRN2Q9H8L6 949 aa6.17□□□□□ -1.42
RNF4-217ENST00000511892 TMEM8AQ9HCN3 771 aa6.17□□□□□ -1.42
RNF4-217ENST00000511892 CSNK1G1Q9HCP0 422 aa6.17□□□□□ -1.42
RNF4-217ENST00000511892 KRT82Q9NSB4 513 aa6.17□□□□□ -1.42
RNF4-217ENST00000511892 FAM49BQ9NUQ9 324 aa6.17□□□□□ -1.42
RNF4-217ENST00000511892 POLR3BQ9NW08 1133 aaPredicted RBP6.17□□□□□ -1.42
RNF4-217ENST00000511892 ANO10Q9NW15 660 aa6.17□□□□□ -1.42
RNF4-217ENST00000511892 EHD2Q9NZN4 543 aa6.17□□□□□ -1.42
RNF4-217ENST00000511892 CHORDC1Q9UHD1 332 aaPredicted RBP6.17□□□□□ -1.42
RNF4-217ENST00000511892 PCDHA5Q9Y5H7 936 aa6.17□□□□□ -1.42
RNF4-217ENST00000511892 CPQQ9Y646 472 aa6.17□□□□□ -1.42
RNF4-217ENST00000511892 ATP8B3O60423 1300 aa6.17□□□□□ -1.42
RNF4-217ENST00000511892 NCOR2Q9Y618 2525 aa6.17□□□□□ -1.42
RNF4-217ENST00000511892 TRIM49BA6NDI0 452 aa6.16□□□□□ -1.42
RNF4-217ENST00000511892 HHLA1C9JL84 531 aa6.16□□□□□ -1.42
RNF4-217ENST00000511892 SCAMP3O14828 347 aaKnown RBP6.16□□□□□ -1.42
RNF4-217ENST00000511892 CETN3O15182 167 aa6.16□□□□□ -1.42
RNF4-217ENST00000511892 COCHO43405 550 aa6.16□□□□□ -1.42
RNF4-217ENST00000511892 CILPO75339 1184 aa6.16□□□□□ -1.42
RNF4-217ENST00000511892 CLSTN1O94985 981 aa6.16□□□□□ -1.42
RNF4-217ENST00000511892 RTN3O95197 1032 aaPredicted RBP6.16□□□□□ -1.42
RNF4-217ENST00000511892 ADH1BP00325 375 aa6.16□□□□□ -1.42
RNF4-217ENST00000511892 MBL2P11226 248 aaPredicted RBP6.16□□□□□ -1.42
RNF4-217ENST00000511892 CD58P19256 250 aa6.16□□□□□ -1.42
RNF4-217ENST00000511892 BMP6P22004 513 aa6.16□□□□□ -1.42
RNF4-217ENST00000511892 TGM1P22735 817 aa6.16□□□□□ -1.42
RNF4-217ENST00000511892 ADORA2BP29275 332 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms