RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 HVCN1Q96D96 273 aa20.25■□□□□ 0.83
HMGCS1-206ENST00000511774 C8orf48Q96LL4 319 aa20.25■□□□□ 0.83
HMGCS1-206ENST00000511774 ZSCAN31Q96LW9 406 aaPredicted RBP20.25■□□□□ 0.83
HMGCS1-206ENST00000511774 CEP295NLQ96MC4 621 aa20.25■□□□□ 0.83
HMGCS1-206ENST00000511774 MRPL45Q9BRJ2 306 aaKnown RBP20.25■□□□□ 0.83
HMGCS1-206ENST00000511774 PCIF1Q9H4Z3 704 aa20.25■□□□□ 0.83
HMGCS1-206ENST00000511774 SCUBE2Q9NQ36 999 aa20.25■□□□□ 0.83
HMGCS1-206ENST00000511774 CACNA2D2Q9NY47 1150 aa20.25■□□□□ 0.83
HMGCS1-206ENST00000511774 ZNF462Q96JM2 2506 aa20.24■□□□□ 0.83
HMGCS1-206ENST00000511774 TRIM66O15016 1216 aa20.24■□□□□ 0.83
HMGCS1-206ENST00000511774 PPP3CCP48454 512 aa20.24■□□□□ 0.83
HMGCS1-206ENST00000511774 L1TD1Q5T7N2 865 aaKnown RBP20.24■□□□□ 0.83
HMGCS1-206ENST00000511774 USP49Q70CQ1 688 aa20.24■□□□□ 0.83
HMGCS1-206ENST00000511774 DPH6Q7L8W6 267 aa20.24■□□□□ 0.83
HMGCS1-206ENST00000511774 HPDLQ96IR7 371 aa20.24■□□□□ 0.83
HMGCS1-206ENST00000511774 ZNF518BQ9C0D4 1074 aa20.24■□□□□ 0.83
HMGCS1-206ENST00000511774 DPEP3Q9H4B8 488 aa20.24■□□□□ 0.83
HMGCS1-206ENST00000511774 SPHK2Q9NRA0 654 aa20.24■□□□□ 0.83
HMGCS1-206ENST00000511774 TBC1D14Q9P2M4 693 aa20.24■□□□□ 0.83
HMGCS1-206ENST00000511774 DEC1Q9P2X7 70 aa20.24■□□□□ 0.83
HMGCS1-206ENST00000511774 STARD13Q9Y3M8 1113 aa20.24■□□□□ 0.83
HMGCS1-206ENST00000511774 KNTC1P50748 2209 aa20.24■□□□□ 0.83
HMGCS1-206ENST00000511774 NUMA1Q14980 2115 aa20.23■□□□□ 0.83
HMGCS1-206ENST00000511774 PRRT4C9JH25 899 aa20.23■□□□□ 0.83
HMGCS1-206ENST00000511774 CLDN5O00501 218 aa20.23■□□□□ 0.83
HMGCS1-206ENST00000511774 PGFP49763 221 aa20.23■□□□□ 0.83
HMGCS1-206ENST00000511774 TMPRSS7Q7RTY8 843 aa20.23■□□□□ 0.83
HMGCS1-206ENST00000511774 TRMT11Q7Z4G4 463 aaKnown RBP20.23■□□□□ 0.83
HMGCS1-206ENST00000511774 BAHD1Q8TBE0 780 aaPredicted RBP20.23■□□□□ 0.83
HMGCS1-206ENST00000511774 MRGPRX1Q96LB2 322 aa20.23■□□□□ 0.83
HMGCS1-206ENST00000511774 KIF2CQ99661 725 aa20.23■□□□□ 0.83
HMGCS1-206ENST00000511774 GABRG3Q99928 467 aa20.23■□□□□ 0.83
HMGCS1-206ENST00000511774 CCSER2Q9H7U1 834 aa20.23■□□□□ 0.83
HMGCS1-206ENST00000511774 INTS13Q9NVM9 706 aa20.23■□□□□ 0.83
HMGCS1-206ENST00000511774 PTPRQQ9UMZ3 2332 aa20.23■□□□□ 0.83
HMGCS1-206ENST00000511774 APOBEC2Q9Y235 224 aaKnown RBP20.23■□□□□ 0.83
HMGCS1-206ENST00000511774 TMEM131Q92545 1883 aa20.22■□□□□ 0.83
HMGCS1-206ENST00000511774 WASH3PC4AMC7 463 aa20.22■□□□□ 0.83
HMGCS1-206ENST00000511774 GREM1O60565 184 aa20.22■□□□□ 0.83
HMGCS1-206ENST00000511774 ZNF217O75362 1048 aa20.22■□□□□ 0.83
HMGCS1-206ENST00000511774 DKK1O94907 266 aa20.22■□□□□ 0.83
HMGCS1-206ENST00000511774 TMEM191BP0C7N4 346 aa20.22■□□□□ 0.83
HMGCS1-206ENST00000511774 ATXN1LP0C7T5 689 aaKnown RBP20.22■□□□□ 0.83
HMGCS1-206ENST00000511774 ANO4Q32M45 955 aa20.22■□□□□ 0.83
HMGCS1-206ENST00000511774 TDRD10Q5VZ19 366 aaKnown RBP20.22■□□□□ 0.83
HMGCS1-206ENST00000511774 DDX42Q86XP3 938 aaKnown RBP eCLIP20.22■□□□□ 0.83
HMGCS1-206ENST00000511774 SPRYD3Q8NCJ5 442 aa20.22■□□□□ 0.83
HMGCS1-206ENST00000511774 SCAMP5Q8TAC9 235 aa20.22■□□□□ 0.83
HMGCS1-206ENST00000511774 NOC3LQ8WTT2 800 aaKnown RBP20.22■□□□□ 0.83
HMGCS1-206ENST00000511774 DNAJC19Q96DA6 116 aa20.22■□□□□ 0.83
HMGCS1-206ENST00000511774 OTUB2Q96DC9 234 aa20.22■□□□□ 0.83
HMGCS1-206ENST00000511774 P2RY11Q96G91 374 aa20.22■□□□□ 0.83
HMGCS1-206ENST00000511774 ACCSQ96QU6 501 aa20.22■□□□□ 0.83
HMGCS1-206ENST00000511774 MRPL44Q9H9J2 332 aaKnown RBP20.22■□□□□ 0.83
HMGCS1-206ENST00000511774 DKK4Q9UBT3 224 aa20.22■□□□□ 0.83
HMGCS1-206ENST00000511774 CHORDC1Q9UHD1 332 aaPredicted RBP20.22■□□□□ 0.83
HMGCS1-206ENST00000511774 FNDC3AQ9Y2H6 1198 aaKnown RBP20.22■□□□□ 0.83
HMGCS1-206ENST00000511774 NAV2Q8IVL1 2488 aa20.21■□□□□ 0.83
HMGCS1-206ENST00000511774 C1QL1O75973 258 aa20.21■□□□□ 0.83
HMGCS1-206ENST00000511774 IRF1P10914 325 aa20.21■□□□□ 0.83
HMGCS1-206ENST00000511774 GARTP22102 1010 aa20.21■□□□□ 0.83
HMGCS1-206ENST00000511774 CYP4F3Q08477 520 aa20.21■□□□□ 0.83
HMGCS1-206ENST00000511774 CAMK2BQ13554 666 aa20.21■□□□□ 0.83
HMGCS1-206ENST00000511774 MAPRE1Q15691 268 aaKnown RBP20.21■□□□□ 0.83
HMGCS1-206ENST00000511774 BTBD8Q5XKL5 378 aa20.21■□□□□ 0.83
HMGCS1-206ENST00000511774 HS2ST1Q7LGA3 356 aa20.21■□□□□ 0.83
HMGCS1-206ENST00000511774 CHPFQ8IZ52 775 aa20.21■□□□□ 0.83
HMGCS1-206ENST00000511774 KRI1Q8N9T8 703 aaKnown RBP20.21■□□□□ 0.83
HMGCS1-206ENST00000511774 SLITRK1Q96PX8 696 aa20.21■□□□□ 0.83
HMGCS1-206ENST00000511774 B3GNT5Q9BYG0 378 aa20.21■□□□□ 0.83
HMGCS1-206ENST00000511774 FAM124BQ9H5Z6 455 aaPredicted RBP20.21■□□□□ 0.83
HMGCS1-206ENST00000511774 KIAA1522Q9P206 1035 aaPredicted RBP20.21■□□□□ 0.83
HMGCS1-206ENST00000511774 YWHAQP27348 245 aa20.2■□□□□ 0.82
HMGCS1-206ENST00000511774 MYO1EQ12965 1108 aa20.2■□□□□ 0.82
HMGCS1-206ENST00000511774 ZCCHC9Q8N567 271 aaKnown RBP20.2■□□□□ 0.82
HMGCS1-206ENST00000511774 GLIS3Q8NEA6 775 aa20.2■□□□□ 0.82
HMGCS1-206ENST00000511774 SETD7Q8WTS6 366 aaKnown RBP20.2■□□□□ 0.82
HMGCS1-206ENST00000511774 DNASE2BQ8WZ79 361 aa20.2■□□□□ 0.82
HMGCS1-206ENST00000511774 FBXO32Q969P5 355 aa20.2■□□□□ 0.82
HMGCS1-206ENST00000511774 EPSTI1Q96J88 318 aa20.2■□□□□ 0.82
HMGCS1-206ENST00000511774 KCNK16Q96T55 309 aa20.2■□□□□ 0.82
HMGCS1-206ENST00000511774 DNAJC17Q9NVM6 304 aaKnown RBP20.2■□□□□ 0.82
HMGCS1-206ENST00000511774 SUSD2Q9UGT4 822 aa20.2■□□□□ 0.82
HMGCS1-206ENST00000511774 BTBD3Q9Y2F9 522 aa20.2■□□□□ 0.82
HMGCS1-206ENST00000511774 SLCO1B1Q9Y6L6 691 aa20.2■□□□□ 0.82
HMGCS1-206ENST00000511774 MYH10P35580 1976 aa20.2■□□□□ 0.82
HMGCS1-206ENST00000511774 TRABD2BA6NFA1 517 aa20.19■□□□□ 0.82
HMGCS1-206ENST00000511774 KCNJ18B7U540 433 aa20.19■□□□□ 0.82
HMGCS1-206ENST00000511774 NDUFS2O75306 463 aa20.19■□□□□ 0.82
HMGCS1-206ENST00000511774 GCNT3O95395 438 aa20.19■□□□□ 0.82
HMGCS1-206ENST00000511774 LDHAP00338 332 aaKnown RBP20.19■□□□□ 0.82
HMGCS1-206ENST00000511774 PTPN1P18031 435 aaKnown RBP20.19■□□□□ 0.82
HMGCS1-206ENST00000511774 GNL1P36915 607 aaPredicted RBP20.19■□□□□ 0.82
HMGCS1-206ENST00000511774 GRAMD4Q6IC98 578 aa20.19■□□□□ 0.82
HMGCS1-206ENST00000511774 KIAA1324Q6UXG2 1013 aaKnown RBP20.19■□□□□ 0.82
HMGCS1-206ENST00000511774 CBWD2Q8IUF1 395 aa20.19■□□□□ 0.82
HMGCS1-206ENST00000511774 RASSF8Q8NHQ8 419 aa20.19■□□□□ 0.82
HMGCS1-206ENST00000511774 ANKRD36BP1Q96IX9 119 aa20.19■□□□□ 0.82
HMGCS1-206ENST00000511774 MMS19Q96T76 1030 aa20.19■□□□□ 0.82
HMGCS1-206ENST00000511774 GAREM1Q9H706 876 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms