RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 PLIN5Q00G26 463 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 ACTN3Q08043 901 aaPredicted RBP5.97□□□□□ -1.45
USP38-203ENST00000511739 NCF4Q15080 339 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 ALG11Q2TAA5 492 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 CCDC92Q53HC0 331 aaPredicted RBP5.97□□□□□ -1.45
USP38-203ENST00000511739 DOK6Q6PKX4 331 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 AGMOQ6ZNB7 445 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 ZNF655Q8N720 491 aaPredicted RBP5.97□□□□□ -1.45
USP38-203ENST00000511739 PIK3R5Q8WYR1 880 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 CASP10Q92851 521 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 EME1Q96AY2 570 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 TMEM159Q96B96 161 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 NSUN4Q96CB9 384 aaKnown RBP5.97□□□□□ -1.45
USP38-203ENST00000511739 CMTM5Q96DZ9 223 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 SERAC1Q96JX3 654 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 TBCDQ9BTW9 1192 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 KCTD10Q9H3F6 313 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 MROH8Q9H579 483 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 DIABLOQ9NR28 239 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 TLR8Q9NR97 1041 aaKnown RBP5.97□□□□□ -1.45
USP38-203ENST00000511739 VTI1BQ9UEU0 232 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 PYCARDQ9ULZ3 195 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 TOPAZ1Q8N9V7 1692 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 A0A087WZ62 844 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 KPNA3O00505 521 aaPredicted RBP5.97□□□□□ -1.45
USP38-203ENST00000511739 CRTAMO95727 393 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 HLA-DRAP01903 254 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 UQCRBP14927 111 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 PGM1P36871 562 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 MMRN1Q13201 1228 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 INAQ16352 499 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 ZNF484Q5JVG2 852 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 AGAP9Q5VTM2 703 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 GPAT2Q6NUI2 795 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 LAYNQ6UX15 382 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 CCDC81Q6ZN84 652 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 UNC45BQ8IWX7 931 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 CYP4Z2PQ8N1L4 340 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 WDR36Q8NI36 951 aaKnown RBP5.97□□□□□ -1.45
USP38-203ENST00000511739 RSPH1Q8WYR4 309 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 C19orf60Q96EN9 201 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 NIF3L1Q9GZT8 377 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 TMEM39BQ9GZU3 492 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 TRABDQ9H4I3 376 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 DAGLAQ9Y4D2 1042 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 SNX8Q9Y5X2 465 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 AK9Q5TCS8 1911 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 KANSL1LA0AUZ9 987 aa5.96□□□□□ -1.45
USP38-203ENST00000511739 MEI4A8MW99 385 aa5.96□□□□□ -1.45
USP38-203ENST00000511739 MSH4O15457 936 aa5.96□□□□□ -1.45
USP38-203ENST00000511739 VPS4BO75351 444 aa5.96□□□□□ -1.45
USP38-203ENST00000511739 IFNA16P05015 189 aa5.96□□□□□ -1.45
USP38-203ENST00000511739 PDHA1P08559 390 aa5.96□□□□□ -1.45
USP38-203ENST00000511739 NDUFV1P49821 464 aa5.96□□□□□ -1.45
USP38-203ENST00000511739 CENPCQ03188 943 aa5.96□□□□□ -1.45
USP38-203ENST00000511739 DHX34Q14147 1143 aaKnown RBP5.96□□□□□ -1.45
USP38-203ENST00000511739 CASP8Q14790 479 aa5.96□□□□□ -1.45
USP38-203ENST00000511739 FAM45BPQ6NSW5 357 aa5.96□□□□□ -1.45
USP38-203ENST00000511739 TMEM154Q6P9G4 183 aa5.96□□□□□ -1.45
USP38-203ENST00000511739 PACS1Q6VY07 963 aa5.96□□□□□ -1.45
USP38-203ENST00000511739 SYDE1Q6ZW31 735 aaPredicted RBP5.96□□□□□ -1.45
USP38-203ENST00000511739 SRBD1Q8N5C6 995 aaKnown RBP5.96□□□□□ -1.45
USP38-203ENST00000511739 CNBD2Q96M20 576 aa5.96□□□□□ -1.45
USP38-203ENST00000511739 PARD6BQ9BYG5 372 aa5.96□□□□□ -1.45
USP38-203ENST00000511739 IL25Q9H293 177 aa5.96□□□□□ -1.45
USP38-203ENST00000511739 DBR1Q9UK59 544 aaKnown RBP5.96□□□□□ -1.45
USP38-203ENST00000511739 PRR12Q9ULL5 1215 aa5.96□□□□□ -1.45
USP38-203ENST00000511739 BCL9O00512 1426 aa5.96□□□□□ -1.45
USP38-203ENST00000511739 AIM2O14862 343 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 STAU1O95793 577 aaKnown RBP5.96□□□□□ -1.46
USP38-203ENST00000511739 F9P00740 461 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 ATP5BP06576 529 aaKnown RBP5.96□□□□□ -1.46
USP38-203ENST00000511739 TCN1P20061 433 aaPredicted RBP5.96□□□□□ -1.46
USP38-203ENST00000511739 C12orf60Q5U649 245 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 FAAH2Q6GMR7 532 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 XRRA1Q6P2D8 792 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 C4orf22Q6V702 233 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 SETD3Q86TU7 594 aaPredicted RBP5.96□□□□□ -1.46
USP38-203ENST00000511739 DSELQ8IZU8 1212 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 GRAMD1AQ96CP6 724 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 MED8Q96G25 268 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 KCNS3Q9BQ31 491 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 MRPL9Q9BYD2 267 aaKnown RBP5.96□□□□□ -1.46
USP38-203ENST00000511739 TMEM117Q9H0C3 514 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 ETNK1Q9HBU6 452 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 METTL5Q9NRN9 209 aaKnown RBP5.96□□□□□ -1.46
USP38-203ENST00000511739 SPG21Q9NZD8 308 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 AAR2Q9Y312 384 aaKnown RBP5.96□□□□□ -1.46
USP38-203ENST00000511739 STON1Q9Y6Q2 735 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 TNS2Q63HR2 1409 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 FOXP2O15409 715 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 SUPT7LO94864 414 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 MYBL2P10244 700 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 CASP1P29466 404 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 NBPF9Q3BBW0 867 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 SLC44A4Q53GD3 710 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 MIER2Q8N344 545 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 TMEM199Q8N511 208 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 KAT2BQ92831 832 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 SGF29Q96ES7 293 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms