RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 MAGOHBQ96A72 148 aaKnown RBP15.89■□□□□ 0.13
SCLT1-209ENST00000511426 IGSF21Q96ID5 467 aa15.89■□□□□ 0.13
SCLT1-209ENST00000511426 ZNF558Q96NG5 402 aa15.89■□□□□ 0.13
SCLT1-209ENST00000511426 KCNK16Q96T55 309 aa15.89■□□□□ 0.13
SCLT1-209ENST00000511426 NPY6RQ99463 290 aa15.89■□□□□ 0.13
SCLT1-209ENST00000511426 NGRNQ9NPE2 291 aaKnown RBP15.89■□□□□ 0.13
SCLT1-209ENST00000511426 TMLHEQ9NVH6 421 aa15.89■□□□□ 0.13
SCLT1-209ENST00000511426 HSFX1Q9UBD0 423 aa15.89■□□□□ 0.13
SCLT1-209ENST00000511426 UTP11Q9Y3A2 253 aaKnown RBP15.89■□□□□ 0.13
SCLT1-209ENST00000511426 COL4A4P53420 1690 aaPredicted RBP15.89■□□□□ 0.13
SCLT1-209ENST00000511426 BHMG1C9JSJ3 638 aaPredicted RBP15.89■□□□□ 0.13
SCLT1-209ENST00000511426 GRAP2O75791 330 aa15.89■□□□□ 0.13
SCLT1-209ENST00000511426 UPP2O95045 317 aa15.89■□□□□ 0.13
SCLT1-209ENST00000511426 F9P00740 461 aa15.89■□□□□ 0.13
SCLT1-209ENST00000511426 LTFP02788 710 aa15.89■□□□□ 0.13
SCLT1-209ENST00000511426 KDELR1P24390 212 aa15.89■□□□□ 0.13
SCLT1-209ENST00000511426 ITGB8P26012 769 aa15.89■□□□□ 0.13
SCLT1-209ENST00000511426 CLCN6P51797 869 aa15.89■□□□□ 0.13
SCLT1-209ENST00000511426 ZNF135P52742 658 aaPredicted RBP15.89■□□□□ 0.13
SCLT1-209ENST00000511426 DRG2P55039 364 aaKnown RBP15.89■□□□□ 0.13
SCLT1-209ENST00000511426 HDAC4P56524 1084 aa15.89■□□□□ 0.13
SCLT1-209ENST00000511426 VSNL1P62760 191 aa15.89■□□□□ 0.13
SCLT1-209ENST00000511426 DR1Q01658 176 aa15.89■□□□□ 0.13
SCLT1-209ENST00000511426 TAF5Q15542 800 aa15.89■□□□□ 0.13
SCLT1-209ENST00000511426 SLC39A12Q504Y0 691 aa15.89■□□□□ 0.13
SCLT1-209ENST00000511426 DAB2IPQ5VWQ8 1189 aa15.89■□□□□ 0.13
SCLT1-209ENST00000511426 SLC8B1Q6J4K2 584 aa15.89■□□□□ 0.13
SCLT1-209ENST00000511426 AADACL2Q6P093 401 aa15.89■□□□□ 0.13
SCLT1-209ENST00000511426 MFSD7Q6UXD7 560 aa15.89■□□□□ 0.13
SCLT1-209ENST00000511426 DEFB106AQ8N104 65 aa15.89■□□□□ 0.13
SCLT1-209ENST00000511426 CLEC4CQ8WTT0 213 aa15.89■□□□□ 0.13
SCLT1-209ENST00000511426 TMEM209Q96SK2 561 aa15.89■□□□□ 0.13
SCLT1-209ENST00000511426 ZNF670Q9BS34 389 aa15.89■□□□□ 0.13
SCLT1-209ENST00000511426 FBXO44Q9H4M3 255 aa15.89■□□□□ 0.13
SCLT1-209ENST00000511426 AAASQ9NRG9 546 aa15.89■□□□□ 0.13
SCLT1-209ENST00000511426 CHST7Q9NS84 486 aa15.89■□□□□ 0.13
SCLT1-209ENST00000511426 RCOR3Q9P2K3 495 aaPredicted RBP15.89■□□□□ 0.13
SCLT1-209ENST00000511426 MTRRQ9UBK8 725 aa15.89■□□□□ 0.13
SCLT1-209ENST00000511426 DMGDHQ9UI17 866 aaKnown RBP15.89■□□□□ 0.13
SCLT1-209ENST00000511426 DNAH12Q6ZR08 3092 aa15.89■□□□□ 0.13
SCLT1-209ENST00000511426 COL4A6Q14031 1691 aa15.88■□□□□ 0.13
SCLT1-209ENST00000511426 C3orf70A6NLC5 250 aaPredicted RBP15.88■□□□□ 0.13
SCLT1-209ENST00000511426 CAPN9O14815 690 aa15.88■□□□□ 0.13
SCLT1-209ENST00000511426 TCF4P15884 667 aa15.88■□□□□ 0.13
SCLT1-209ENST00000511426 RDXP35241 583 aaKnown RBP15.88■□□□□ 0.13
SCLT1-209ENST00000511426 GJC1P36383 396 aa15.88■□□□□ 0.13
SCLT1-209ENST00000511426 COILP38432 576 aaPredicted RBP15.88■□□□□ 0.13
SCLT1-209ENST00000511426 GRIK1P39086 918 aa15.88■□□□□ 0.13
SCLT1-209ENST00000511426 ATP11AP98196 1134 aa15.88■□□□□ 0.13
SCLT1-209ENST00000511426 TFDP2Q14188 446 aa15.88■□□□□ 0.13
SCLT1-209ENST00000511426 C15orf59Q2T9L4 293 aaPredicted RBP15.88■□□□□ 0.13
SCLT1-209ENST00000511426 PSRC1Q6PGN9 363 aaPredicted RBP15.88■□□□□ 0.13
SCLT1-209ENST00000511426 CCDC137Q6PK04 289 aaKnown RBP15.88■□□□□ 0.13
SCLT1-209ENST00000511426 KCNT2Q6UVM3 1135 aa15.88■□□□□ 0.13
SCLT1-209ENST00000511426 CCNI2Q6ZMN8 369 aaPredicted RBP15.88■□□□□ 0.13
SCLT1-209ENST00000511426 CEP57Q86XR8 500 aa15.88■□□□□ 0.13
SCLT1-209ENST00000511426 ARHGAP18Q8N392 663 aa15.88■□□□□ 0.13
SCLT1-209ENST00000511426 KCTD6Q8NC69 237 aa15.88■□□□□ 0.13
SCLT1-209ENST00000511426 RNF25Q96BH1 459 aaPredicted RBP15.88■□□□□ 0.13
SCLT1-209ENST00000511426 EPC1Q9H2F5 836 aa15.88■□□□□ 0.13
SCLT1-209ENST00000511426 ZWILCHQ9H900 591 aa15.88■□□□□ 0.13
SCLT1-209ENST00000511426 TMEM30AQ9NV96 361 aa15.88■□□□□ 0.13
SCLT1-209ENST00000511426 AMACRQ9UHK6 382 aa15.88■□□□□ 0.13
SCLT1-209ENST00000511426 PATJQ8NI35 1801 aa15.87■□□□□ 0.13
SCLT1-209ENST00000511426 TNFRSF10BO14763 440 aa15.87■□□□□ 0.13
SCLT1-209ENST00000511426 GAS8O95995 478 aa15.87■□□□□ 0.13
SCLT1-209ENST00000511426 SOD2P04179 222 aa15.87■□□□□ 0.13
SCLT1-209ENST00000511426 SULT1E1P49888 294 aa15.87■□□□□ 0.13
SCLT1-209ENST00000511426 ARSEP51690 589 aa15.87■□□□□ 0.13
SCLT1-209ENST00000511426 SLC5A3P53794 718 aa15.87■□□□□ 0.13
SCLT1-209ENST00000511426 CACNA2D1P54289 1103 aa15.87■□□□□ 0.13
SCLT1-209ENST00000511426 BTG3Q14201 252 aaPredicted RBP15.87■□□□□ 0.13
SCLT1-209ENST00000511426 DPYSL2Q16555 572 aa15.87■□□□□ 0.13
SCLT1-209ENST00000511426 CDO1Q16878 200 aa15.87■□□□□ 0.13
SCLT1-209ENST00000511426 DCAF6Q58WW2 860 aa15.87■□□□□ 0.13
SCLT1-209ENST00000511426 ERMARDQ5T6L9 678 aa15.87■□□□□ 0.13
SCLT1-209ENST00000511426 TXNRD3NBQ6F5E7 133 aa15.87■□□□□ 0.13
SCLT1-209ENST00000511426 EMBQ6PCB8 327 aa15.87■□□□□ 0.13
SCLT1-209ENST00000511426 BBS12Q6ZW61 710 aa15.87■□□□□ 0.13
SCLT1-209ENST00000511426 CYP4V2Q6ZWL3 525 aaPredicted RBP15.87■□□□□ 0.13
SCLT1-209ENST00000511426 SLC39A11Q8N1S5 342 aa15.87■□□□□ 0.13
SCLT1-209ENST00000511426 CCHCR1Q8TD31 782 aa15.87■□□□□ 0.13
SCLT1-209ENST00000511426 RAPGEF5Q92565 580 aa15.87■□□□□ 0.13
SCLT1-209ENST00000511426 NTAN1Q96AB6 310 aa15.87■□□□□ 0.13
SCLT1-209ENST00000511426 TMEM169Q96HH4 297 aa15.87■□□□□ 0.13
SCLT1-209ENST00000511426 SPATA17Q96L03 361 aa15.87■□□□□ 0.13
SCLT1-209ENST00000511426 FAM114A2Q9NRY5 505 aa15.87■□□□□ 0.13
SCLT1-209ENST00000511426 MAFFQ9ULX9 164 aa15.87■□□□□ 0.13
SCLT1-209ENST00000511426 NR2E1Q9Y466 385 aa15.87■□□□□ 0.13
SCLT1-209ENST00000511426 NLRC5Q86WI3 1866 aa15.87■□□□□ 0.13
SCLT1-209ENST00000511426 PTPRDP23468 1912 aa15.87■□□□□ 0.13
SCLT1-209ENST00000511426 BRCA2P51587 3418 aa15.87■□□□□ 0.13
SCLT1-209ENST00000511426 RTN3O95197 1032 aaPredicted RBP15.86■□□□□ 0.13
SCLT1-209ENST00000511426 ECEL1O95672 775 aa15.86■□□□□ 0.13
SCLT1-209ENST00000511426 CPB1P15086 417 aa15.86■□□□□ 0.13
SCLT1-209ENST00000511426 EPHB4P54760 987 aa15.86■□□□□ 0.13
SCLT1-209ENST00000511426 RPL10AP62906 217 aaKnown RBP15.86■□□□□ 0.13
SCLT1-209ENST00000511426 CREMQ03060 361 aa15.86■□□□□ 0.13
SCLT1-209ENST00000511426 FPGSQ05932 587 aa15.86■□□□□ 0.13
SCLT1-209ENST00000511426 ATP13A4Q4VNC1 1196 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms