RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 PSMC3P17980 439 aa9.2□□□□□ -0.94
PDPN-209ENST00000510906 TNNI1P19237 187 aa9.2□□□□□ -0.94
PDPN-209ENST00000510906 LMO2P25791 158 aa9.2□□□□□ -0.94
PDPN-209ENST00000510906 GDI1P31150 447 aa9.2□□□□□ -0.94
PDPN-209ENST00000510906 CASP4P49662 377 aa9.2□□□□□ -0.94
PDPN-209ENST00000510906 CYP4F8P98187 520 aa9.2□□□□□ -0.94
PDPN-209ENST00000510906 MYL7Q01449 175 aa9.2□□□□□ -0.94
PDPN-209ENST00000510906 CTBSQ01459 385 aa9.2□□□□□ -0.94
PDPN-209ENST00000510906 PRKCQQ04759 706 aa9.2□□□□□ -0.94
PDPN-209ENST00000510906 MYO1EQ12965 1108 aa9.2□□□□□ -0.94
PDPN-209ENST00000510906 UBXN2BQ14CS0 331 aa9.2□□□□□ -0.94
PDPN-209ENST00000510906 VEPH1Q14D04 833 aa9.2□□□□□ -0.94
PDPN-209ENST00000510906 ANGPT1Q15389 498 aa9.2□□□□□ -0.94
PDPN-209ENST00000510906 NFE2Q16621 373 aaPredicted RBP9.2□□□□□ -0.94
PDPN-209ENST00000510906 GPR158Q5T848 1215 aa9.2□□□□□ -0.94
PDPN-209ENST00000510906 ZNF468Q5VIY5 522 aaPredicted RBP9.2□□□□□ -0.94
PDPN-209ENST00000510906 LIMS2Q7Z4I7 341 aa9.2□□□□□ -0.94
PDPN-209ENST00000510906 FSIP1Q8NA03 581 aa9.2□□□□□ -0.94
PDPN-209ENST00000510906 PLEKHO2Q8TD55 490 aa9.2□□□□□ -0.94
PDPN-209ENST00000510906 KBTBD7Q8WVZ9 684 aa9.2□□□□□ -0.94
PDPN-209ENST00000510906 FNBP1Q96RU3 617 aa9.2□□□□□ -0.94
PDPN-209ENST00000510906 TRMT61BQ9BVS5 477 aaKnown RBP9.2□□□□□ -0.94
PDPN-209ENST00000510906 SCAND2PQ9GZW5 306 aaPredicted RBP9.2□□□□□ -0.94
PDPN-209ENST00000510906 IRF2BPLQ9H1B7 796 aa9.2□□□□□ -0.94
PDPN-209ENST00000510906 BRD9Q9H8M2 597 aa9.2□□□□□ -0.94
PDPN-209ENST00000510906 GTF3C4Q9UKN8 822 aa9.2□□□□□ -0.94
PDPN-209ENST00000510906 ATP6V1DQ9Y5K8 247 aa9.2□□□□□ -0.94
PDPN-209ENST00000510906 FASNP49327 2511 aaKnown RBP9.2□□□□□ -0.94
PDPN-209ENST00000510906 A0A1W2PQ27 194 aa9.19□□□□□ -0.94
PDPN-209ENST00000510906 A0A1W2PQ64 194 aa9.19□□□□□ -0.94
PDPN-209ENST00000510906 A0A1W2PQD8 194 aa9.19□□□□□ -0.94
PDPN-209ENST00000510906 FAM170BA6NMN3 283 aa9.19□□□□□ -0.94
PDPN-209ENST00000510906 ATP2C2O75185 946 aa9.19□□□□□ -0.94
PDPN-209ENST00000510906 PRAMEF12O95522 483 aa9.19□□□□□ -0.94
PDPN-209ENST00000510906 FGF19O95750 216 aa9.19□□□□□ -0.94
PDPN-209ENST00000510906 RPN1P04843 607 aaKnown RBP9.19□□□□□ -0.94
PDPN-209ENST00000510906 HMGA1P17096 107 aaKnown RBP9.19□□□□□ -0.94
PDPN-209ENST00000510906 CYP2F1P24903 491 aa9.19□□□□□ -0.94
PDPN-209ENST00000510906 PCSK1P29120 753 aa9.19□□□□□ -0.94
PDPN-209ENST00000510906 LHX1P48742 406 aa9.19□□□□□ -0.94
PDPN-209ENST00000510906 PSMC1P62191 440 aaKnown RBP9.19□□□□□ -0.94
PDPN-209ENST00000510906 TAF12Q16514 161 aa9.19□□□□□ -0.94
PDPN-209ENST00000510906 DDR2Q16832 855 aa9.19□□□□□ -0.94
PDPN-209ENST00000510906 ARHGAP15Q53QZ3 475 aa9.19□□□□□ -0.94
PDPN-209ENST00000510906 FOXR1Q6PIV2 292 aa9.19□□□□□ -0.94
PDPN-209ENST00000510906 DPH6Q7L8W6 267 aa9.19□□□□□ -0.94
PDPN-209ENST00000510906 TMEM150AQ86TG1 271 aa9.19□□□□□ -0.94
PDPN-209ENST00000510906 CCNJLQ8IV13 435 aa9.19□□□□□ -0.94
PDPN-209ENST00000510906 ARID3BQ8IVW6 561 aaPredicted RBP9.19□□□□□ -0.94
PDPN-209ENST00000510906 MFSD6LQ8IWD5 586 aa9.19□□□□□ -0.94
PDPN-209ENST00000510906 GOLGA5Q8TBA6 731 aa9.19□□□□□ -0.94
PDPN-209ENST00000510906 SPATA18Q8TC71 538 aa9.19□□□□□ -0.94
PDPN-209ENST00000510906 DEPDC1BQ8WUY9 529 aa9.19□□□□□ -0.94
PDPN-209ENST00000510906 DNASE1L2Q92874 299 aa9.19□□□□□ -0.94
PDPN-209ENST00000510906 LRRC3BQ96PB8 259 aa9.19□□□□□ -0.94
PDPN-209ENST00000510906 MMS19Q96T76 1030 aa9.19□□□□□ -0.94
PDPN-209ENST00000510906 SYT15Q9BQS2 421 aa9.19□□□□□ -0.94
PDPN-209ENST00000510906 MRPL45Q9BRJ2 306 aaKnown RBP9.19□□□□□ -0.94
PDPN-209ENST00000510906 GPR88Q9GZN0 384 aa9.19□□□□□ -0.94
PDPN-209ENST00000510906 KCTD10Q9H3F6 313 aa9.19□□□□□ -0.94
PDPN-209ENST00000510906 TASP1Q9H6P5 420 aa9.19□□□□□ -0.94
PDPN-209ENST00000510906 LTB4R2Q9NPC1 389 aa9.19□□□□□ -0.94
PDPN-209ENST00000510906 CRTAC1Q9NQ79 661 aa9.19□□□□□ -0.94
PDPN-209ENST00000510906 DMAC2Q9NW81 257 aa9.19□□□□□ -0.94
PDPN-209ENST00000510906 CGNQ9P2M7 1197 aaKnown RBP9.19□□□□□ -0.94
PDPN-209ENST00000510906 NME7Q9Y5B8 376 aa9.19□□□□□ -0.94
PDPN-209ENST00000510906 DMXL1Q9Y485 3027 aa9.18□□□□□ -0.94
PDPN-209ENST00000510906 VPS13AQ96RL7 3174 aa9.18□□□□□ -0.94
PDPN-209ENST00000510906 ASPMQ8IZT6 3477 aa9.18□□□□□ -0.94
PDPN-209ENST00000510906 LRRIQ3A6PVS8 624 aaPredicted RBP9.18□□□□□ -0.94
PDPN-209ENST00000510906 ARNTLO00327 626 aa9.18□□□□□ -0.94
PDPN-209ENST00000510906 ZNF263O14978 683 aa9.18□□□□□ -0.94
PDPN-209ENST00000510906 NR3C1P04150 777 aa9.18□□□□□ -0.94
PDPN-209ENST00000510906 MYL1P05976 194 aa9.18□□□□□ -0.94
PDPN-209ENST00000510906 PDGFRBP09619 1106 aa9.18□□□□□ -0.94
PDPN-209ENST00000510906 ACPPP15309 386 aa9.18□□□□□ -0.94
PDPN-209ENST00000510906 WARSP23381 471 aaKnown RBP9.18□□□□□ -0.94
PDPN-209ENST00000510906 CDC25CP30307 473 aa9.18□□□□□ -0.94
PDPN-209ENST00000510906 NBL1P41271 181 aa9.18□□□□□ -0.94
PDPN-209ENST00000510906 NLRP12P59046 1061 aa9.18□□□□□ -0.94
PDPN-209ENST00000510906 MYL6P60660 151 aa9.18□□□□□ -0.94
PDPN-209ENST00000510906 BECN1Q14457 450 aa9.18□□□□□ -0.94
PDPN-209ENST00000510906 FAM171BQ6P995 826 aa9.18□□□□□ -0.94
PDPN-209ENST00000510906 ZNF852Q6ZMS4 543 aa9.18□□□□□ -0.94
PDPN-209ENST00000510906 KRBA2Q6ZNG9 492 aa9.18□□□□□ -0.94
PDPN-209ENST00000510906 FRMD5Q7Z6J6 570 aa9.18□□□□□ -0.94
PDPN-209ENST00000510906 SPATA2LQ8IUW3 424 aaPredicted RBP9.18□□□□□ -0.94
PDPN-209ENST00000510906 SCN4BQ8IWT1 228 aa9.18□□□□□ -0.94
PDPN-209ENST00000510906 PARD3BQ8TEW8 1205 aa9.18□□□□□ -0.94
PDPN-209ENST00000510906 IRF7Q92985 503 aa9.18□□□□□ -0.94
PDPN-209ENST00000510906 MYLPFQ96A32 169 aa9.18□□□□□ -0.94
PDPN-209ENST00000510906 ELMO3Q96BJ8 720 aa9.18□□□□□ -0.94
PDPN-209ENST00000510906 NSUN5Q96P11 429 aaKnown RBP9.18□□□□□ -0.94
PDPN-209ENST00000510906 GCNAQ96QF7 691 aa9.18□□□□□ -0.94
PDPN-209ENST00000510906 SLC46A2Q9BY10 475 aa9.18□□□□□ -0.94
PDPN-209ENST00000510906 BHLHE41Q9C0J9 482 aaPredicted RBP9.18□□□□□ -0.94
PDPN-209ENST00000510906 SMG9Q9H0W8 520 aaKnown RBP9.18□□□□□ -0.94
PDPN-209ENST00000510906 XYLT2Q9H1B5 865 aa9.18□□□□□ -0.94
PDPN-209ENST00000510906 LIN7BQ9HAP6 207 aa9.18□□□□□ -0.94
PDPN-209ENST00000510906 CDH9Q9ULB4 789 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms