RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 TNFRSF4P43489 277 aa16.89■□□□□ 0.29
RAB40C-202ENST00000509637 PDE6CP51160 858 aa16.89■□□□□ 0.29
RAB40C-202ENST00000509637 SLC5A3P53794 718 aa16.89■□□□□ 0.29
RAB40C-202ENST00000509637 CLDN10P78369 228 aa16.89■□□□□ 0.29
RAB40C-202ENST00000509637 FOXC1Q12948 553 aa16.89■□□□□ 0.29
RAB40C-202ENST00000509637 FOXD4L6Q3SYB3 417 aaPredicted RBP16.89■□□□□ 0.29
RAB40C-202ENST00000509637 FOXD4L3Q6VB84 417 aaPredicted RBP16.89■□□□□ 0.29
RAB40C-202ENST00000509637 SCARA5Q6ZMJ2 495 aa16.89■□□□□ 0.29
RAB40C-202ENST00000509637 ACOT1Q86TX2 421 aa16.89■□□□□ 0.29
RAB40C-202ENST00000509637 HMGB4Q8WW32 186 aa16.89■□□□□ 0.29
RAB40C-202ENST00000509637 EXOC4Q96A65 974 aa16.89■□□□□ 0.29
RAB40C-202ENST00000509637 SLITRK1Q96PX8 696 aa16.89■□□□□ 0.29
RAB40C-202ENST00000509637 TMEM9BQ9NQ34 198 aa16.89■□□□□ 0.29
RAB40C-202ENST00000509637 R3HCC1Q9Y3T6 440 aaKnown RBP16.89■□□□□ 0.29
RAB40C-202ENST00000509637 CEP295Q9C0D2 2601 aa16.88■□□□□ 0.29
RAB40C-202ENST00000509637 PCDH15Q96QU1 1955 aa16.88■□□□□ 0.29
RAB40C-202ENST00000509637 TCRBV21S2A2A0A5A6 115 aa16.88■□□□□ 0.29
RAB40C-202ENST00000509637 HHLA1C9JL84 531 aa16.88■□□□□ 0.29
RAB40C-202ENST00000509637 SLC9A3R1O14745 358 aaPredicted RBP16.88■□□□□ 0.29
RAB40C-202ENST00000509637 HOXC11O43248 304 aaPredicted RBP16.88■□□□□ 0.29
RAB40C-202ENST00000509637 CUTAO60888 179 aa16.88■□□□□ 0.29
RAB40C-202ENST00000509637 CSRP1P21291 193 aaKnown RBP16.88■□□□□ 0.29
RAB40C-202ENST00000509637 AFMP43652 599 aa16.88■□□□□ 0.29
RAB40C-202ENST00000509637 TNNC1P63316 161 aa16.88■□□□□ 0.29
RAB40C-202ENST00000509637 FAM193AP78312 1265 aa16.88■□□□□ 0.29
RAB40C-202ENST00000509637 STK4Q13043 487 aa16.88■□□□□ 0.29
RAB40C-202ENST00000509637 UAP1L1Q3KQV9 507 aa16.88■□□□□ 0.29
RAB40C-202ENST00000509637 TRIM61Q5EBN2 209 aa16.88■□□□□ 0.29
RAB40C-202ENST00000509637 HECTD3Q5T447 861 aa16.88■□□□□ 0.29
RAB40C-202ENST00000509637 SPOPLQ6IQ16 392 aa16.88■□□□□ 0.29
RAB40C-202ENST00000509637 KIAA1211LQ6NV74 962 aa16.88■□□□□ 0.29
RAB40C-202ENST00000509637 C12orf29Q8N999 325 aa16.88■□□□□ 0.29
RAB40C-202ENST00000509637 KIAA0895Q8NCT3 520 aa16.88■□□□□ 0.29
RAB40C-202ENST00000509637 OR2I1PQ8NGU4 316 aa16.88■□□□□ 0.29
RAB40C-202ENST00000509637 GATA6Q92908 595 aa16.88■□□□□ 0.29
RAB40C-202ENST00000509637 TWNKQ96RR1 684 aa16.88■□□□□ 0.29
RAB40C-202ENST00000509637 KLF16Q9BXK1 252 aaPredicted RBP16.88■□□□□ 0.29
RAB40C-202ENST00000509637 CUEDC2Q9H467 287 aa16.88■□□□□ 0.29
RAB40C-202ENST00000509637 EVLQ9UI08 416 aaPredicted RBP16.88■□□□□ 0.29
RAB40C-202ENST00000509637 PILRBQ9UKJ0 227 aa16.88■□□□□ 0.29
RAB40C-202ENST00000509637 PCDHA7Q9UN72 937 aa16.88■□□□□ 0.29
RAB40C-202ENST00000509637 PRRT4C9JH25 899 aa16.87■□□□□ 0.29
RAB40C-202ENST00000509637 IRF1P10914 325 aa16.87■□□□□ 0.29
RAB40C-202ENST00000509637 HOXB3P14651 431 aaPredicted RBP16.87■□□□□ 0.29
RAB40C-202ENST00000509637 ATICP31939 592 aa16.87■□□□□ 0.29
RAB40C-202ENST00000509637 TRPC3Q13507 836 aa16.87■□□□□ 0.29
RAB40C-202ENST00000509637 KNOP1Q1ED39 458 aaKnown RBP16.87■□□□□ 0.29
RAB40C-202ENST00000509637 DAB2IPQ5VWQ8 1189 aa16.87■□□□□ 0.29
RAB40C-202ENST00000509637 PEAR1Q5VY43 1037 aaPredicted RBP16.87■□□□□ 0.29
RAB40C-202ENST00000509637 EGFLAMQ63HQ2 1017 aa16.87■□□□□ 0.29
RAB40C-202ENST00000509637 UNQ6494/PRO21346Q6UXR6 183 aa16.87■□□□□ 0.29
RAB40C-202ENST00000509637 TOGARAM2Q6ZUX3 1019 aa16.87■□□□□ 0.29
RAB40C-202ENST00000509637 STXBP4Q6ZWJ1 553 aa16.87■□□□□ 0.29
RAB40C-202ENST00000509637 PIP4P1Q86T03 277 aa16.87■□□□□ 0.29
RAB40C-202ENST00000509637 SLC41A1Q8IVJ1 513 aa16.87■□□□□ 0.29
RAB40C-202ENST00000509637 IQUBQ8NA54 791 aa16.87■□□□□ 0.29
RAB40C-202ENST00000509637 SLC6A17Q9H1V8 727 aa16.87■□□□□ 0.29
RAB40C-202ENST00000509637 NMUR1Q9HB89 426 aa16.87■□□□□ 0.29
RAB40C-202ENST00000509637 CSNK1G1Q9HCP0 422 aa16.87■□□□□ 0.29
RAB40C-202ENST00000509637 SPHK2Q9NRA0 654 aa16.87■□□□□ 0.29
RAB40C-202ENST00000509637 NUDT5Q9UKK9 219 aa16.87■□□□□ 0.29
RAB40C-202ENST00000509637 ZMIZ1Q9ULJ6 1067 aa16.87■□□□□ 0.29
RAB40C-202ENST00000509637 AKAP13Q12802 2813 aa16.87■□□□□ 0.29
RAB40C-202ENST00000509637 IGF2RP11717 2491 aa16.86■□□□□ 0.29
RAB40C-202ENST00000509637 MDM4O15151 490 aa16.86■□□□□ 0.29
RAB40C-202ENST00000509637 AP1G2O75843 785 aa16.86■□□□□ 0.29
RAB40C-202ENST00000509637 RTN3O95197 1032 aaPredicted RBP16.86■□□□□ 0.29
RAB40C-202ENST00000509637 YEATS4O95619 227 aa16.86■□□□□ 0.29
RAB40C-202ENST00000509637 ADH1CP00326 375 aa16.86■□□□□ 0.29
RAB40C-202ENST00000509637 CEACAM1P13688 526 aa16.86■□□□□ 0.29
RAB40C-202ENST00000509637 ENGP17813 658 aa16.86■□□□□ 0.29
RAB40C-202ENST00000509637 MAPK8P45983 427 aa16.86■□□□□ 0.29
RAB40C-202ENST00000509637 GAD2Q05329 585 aa16.86■□□□□ 0.29
RAB40C-202ENST00000509637 NCOA4Q13772 614 aa16.86■□□□□ 0.29
RAB40C-202ENST00000509637 PKP1Q13835 747 aa16.86■□□□□ 0.29
RAB40C-202ENST00000509637 EOGTQ5NDL2 527 aa16.86■□□□□ 0.29
RAB40C-202ENST00000509637 CRYBG2Q8N1P7 616 aa16.86■□□□□ 0.29
RAB40C-202ENST00000509637 WHAMMQ8TF30 809 aa16.86■□□□□ 0.29
RAB40C-202ENST00000509637 OVCA2Q8WZ82 227 aa16.86■□□□□ 0.29
RAB40C-202ENST00000509637 SYAP1Q96A49 352 aaPredicted RBP16.86■□□□□ 0.29
RAB40C-202ENST00000509637 SCNM1Q9BWG6 230 aa16.86■□□□□ 0.29
RAB40C-202ENST00000509637 KCTD10Q9H3F6 313 aa16.86■□□□□ 0.29
RAB40C-202ENST00000509637 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.86■□□□□ 0.295e-7■■■■■ 252.6
RAB40C-202ENST00000509637 KRT82Q9NSB4 513 aa16.86■□□□□ 0.29
RAB40C-202ENST00000509637 TBC1D14Q9P2M4 693 aa16.86■□□□□ 0.29
RAB40C-202ENST00000509637 SERTAD1Q9UHV2 236 aa16.86■□□□□ 0.29
RAB40C-202ENST00000509637 CIZ1Q9ULV3 898 aaPredicted RBP16.86■□□□□ 0.29
RAB40C-202ENST00000509637 UBE4BO95155 1302 aa16.86■□□□□ 0.29
RAB40C-202ENST00000509637 SPAARA0A1B0GVQ0 90 aa16.85■□□□□ 0.29
RAB40C-202ENST00000509637 TBC1D3BA6NDS4 549 aa16.85■□□□□ 0.29
RAB40C-202ENST00000509637 WASH3PC4AMC7 463 aa16.85■□□□□ 0.29
RAB40C-202ENST00000509637 K7ELQ4 463 aaPredicted RBP16.85■□□□□ 0.29
RAB40C-202ENST00000509637 EXOC3O60645 756 aa16.85■□□□□ 0.29
RAB40C-202ENST00000509637 CISD3P0C7P0 127 aa16.85■□□□□ 0.29
RAB40C-202ENST00000509637 NDST1P52848 882 aa16.85■□□□□ 0.29
RAB40C-202ENST00000509637 MAP3K7CLP57077 242 aa16.85■□□□□ 0.29
RAB40C-202ENST00000509637 SNRPFP62306 86 aaKnown RBP16.85■□□□□ 0.29
RAB40C-202ENST00000509637 ZNF699Q32M78 642 aa16.85■□□□□ 0.29
RAB40C-202ENST00000509637 HSF5Q4G112 596 aaPredicted RBP16.85■□□□□ 0.29
RAB40C-202ENST00000509637 ZNF667Q5HYK9 610 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms