RNA–Protein interactions for RNA: ENST00000509384.5

LYSMD3-204, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 1,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-204ENST00000509384 POPDC2Q9HBU9 364 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 SPG21Q9NZD8 308 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 MTRRQ9UBK8 725 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 FNDC1Q4ZHG4 1894 aaPredicted RBP13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 PDE4DIPQ5VU43 2346 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 LRRD1A4D1F6 860 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 MTMR11A4FU01 709 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 YJEFN3A6XGL0 299 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 E7ENQ6 273 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 CAPN9O14815 690 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 FSCN2O14926 492 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 GJB5O95377 273 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 TRUB2O95900 331 aaKnown RBP13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 LTFP02788 710 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 SOD2P04179 222 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 RALAP11233 206 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 SYN1P17600 705 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 NOS2P35228 1153 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 PPM1AP35813 382 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 SULT1E1P49888 294 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 CLCN6P51797 869 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 EPHB4P54760 987 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 COPS2P61201 443 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 GLE1Q53GS7 698 aaKnown RBP13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 DCAF6Q58WW2 860 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 KCNT1Q5JUK3 1230 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 SCYL2Q6P3W7 929 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 RSPO2Q6UXX9 243 aaPredicted RBP13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 ATAD1Q8NBU5 361 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 C2orf15Q8WU43 125 aaKnown RBP13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 HSPH1Q92598 858 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 C8orf48Q96LL4 319 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 SLITRK1Q96PX8 696 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 PEBP4Q96S96 227 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 TBCBQ99426 244 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 ZBED2Q9BTP6 218 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 C11orf84Q9BUA3 381 aaPredicted RBP13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 HERC2P3Q9BVR0 1158 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 OSBPL8Q9BZF1 889 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 AAASQ9NRG9 546 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 CHST7Q9NS84 486 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 STAP1Q9ULZ2 295 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 BACE2Q9Y5Z0 518 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 CDY1Q9Y6F8 540 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 TARSL2A2RTX5 802 aaKnown RBP13.17□□□□□ -0.3
LYSMD3-204ENST00000509384 CCDC151A5D8V7 595 aa13.17□□□□□ -0.3
LYSMD3-204ENST00000509384 TNFRSF10BO14763 440 aa13.17□□□□□ -0.3
LYSMD3-204ENST00000509384 TFE3P19532 575 aaPredicted RBP13.17□□□□□ -0.3
LYSMD3-204ENST00000509384 GLUD2P49448 558 aa13.17□□□□□ -0.3
LYSMD3-204ENST00000509384 HDAC4P56524 1084 aa13.17□□□□□ -0.3
LYSMD3-204ENST00000509384 HTRA4P83105 476 aaPredicted RBP13.17□□□□□ -0.3
LYSMD3-204ENST00000509384 IFRD2Q12894 506 aaPredicted RBP13.17□□□□□ -0.3
LYSMD3-204ENST00000509384 LLGL1Q15334 1064 aa13.17□□□□□ -0.3
LYSMD3-204ENST00000509384 PPP2R5EQ16537 467 aa13.17□□□□□ -0.3
LYSMD3-204ENST00000509384 SLC25A52Q3SY17 297 aa13.17□□□□□ -0.3
LYSMD3-204ENST00000509384 RAB6CQ53S08 254 aa13.17□□□□□ -0.3
LYSMD3-204ENST00000509384 PM20D1Q6GTS8 502 aa13.17□□□□□ -0.3
LYSMD3-204ENST00000509384 SLC8B1Q6J4K2 584 aa13.17□□□□□ -0.3
LYSMD3-204ENST00000509384 MFSD7Q6UXD7 560 aa13.17□□□□□ -0.3
LYSMD3-204ENST00000509384 SPOCD1Q6ZMY3 1216 aa13.17□□□□□ -0.3
LYSMD3-204ENST00000509384 RNF19BQ6ZMZ0 732 aa13.17□□□□□ -0.3
LYSMD3-204ENST00000509384 HFE2Q6ZVN8 426 aa13.17□□□□□ -0.3
LYSMD3-204ENST00000509384 STRADAQ7RTN6 431 aa13.17□□□□□ -0.3
LYSMD3-204ENST00000509384 BHLHA9Q7RTU4 235 aa13.17□□□□□ -0.3
LYSMD3-204ENST00000509384 FIBCD1Q8N539 461 aa13.17□□□□□ -0.3
LYSMD3-204ENST00000509384 FBXO22Q8NEZ5 403 aa13.17□□□□□ -0.3
LYSMD3-204ENST00000509384 SCAMP5Q8TAC9 235 aa13.17□□□□□ -0.3
LYSMD3-204ENST00000509384 RAPGEF5Q92565 580 aa13.17□□□□□ -0.3
LYSMD3-204ENST00000509384 CENPIQ92674 756 aaPredicted RBP13.17□□□□□ -0.3
LYSMD3-204ENST00000509384 LRRC1Q9BTT6 524 aa13.17□□□□□ -0.3
LYSMD3-204ENST00000509384 TRIM62Q9BVG3 475 aa13.17□□□□□ -0.3
LYSMD3-204ENST00000509384 HEMGNQ9BXL5 484 aa13.17□□□□□ -0.3
LYSMD3-204ENST00000509384 PARD6BQ9BYG5 372 aa13.17□□□□□ -0.3
LYSMD3-204ENST00000509384 RAB6CQ9H0N0 254 aa13.17□□□□□ -0.3
LYSMD3-204ENST00000509384 DDX47Q9H0S4 455 aaKnown RBP13.17□□□□□ -0.3
LYSMD3-204ENST00000509384 SLITRK6Q9H5Y7 841 aa13.17□□□□□ -0.3
LYSMD3-204ENST00000509384 CXXC1Q9P0U4 656 aaPredicted RBP13.17□□□□□ -0.3
LYSMD3-204ENST00000509384 ZMYND8Q9ULU4 1186 aaPredicted RBP13.17□□□□□ -0.3
LYSMD3-204ENST00000509384 USP3Q9Y6I4 520 aa13.17□□□□□ -0.3
LYSMD3-204ENST00000509384 TCRBV7S2A1N4TA0A589 114 aa13.16□□□□□ -0.3
LYSMD3-204ENST00000509384 C2CD2LO14523 706 aa13.16□□□□□ -0.3
LYSMD3-204ENST00000509384 PHF2O75151 1096 aa13.16□□□□□ -0.3
LYSMD3-204ENST00000509384 ERLIN1O75477 346 aa13.16□□□□□ -0.3
LYSMD3-204ENST00000509384 URODP06132 367 aa13.16□□□□□ -0.3
LYSMD3-204ENST00000509384 RARAP10276 462 aa13.16□□□□□ -0.3
LYSMD3-204ENST00000509384 MCM3P25205 808 aa13.16□□□□□ -0.3
LYSMD3-204ENST00000509384 PTPN7P35236 360 aa13.16□□□□□ -0.3
LYSMD3-204ENST00000509384 GPR15P49685 360 aa13.16□□□□□ -0.3
LYSMD3-204ENST00000509384 DSG1Q02413 1049 aa13.16□□□□□ -0.3
LYSMD3-204ENST00000509384 DDR2Q16832 855 aa13.16□□□□□ -0.3
LYSMD3-204ENST00000509384 MGAT5BQ3V5L5 792 aa13.16□□□□□ -0.3
LYSMD3-204ENST00000509384 BOLA3Q53S33 107 aa13.16□□□□□ -0.3
LYSMD3-204ENST00000509384 CYP4V2Q6ZWL3 525 aaPredicted RBP13.16□□□□□ -0.3
LYSMD3-204ENST00000509384 DDX53Q86TM3 631 aaKnown RBP13.16□□□□□ -0.3
LYSMD3-204ENST00000509384 TTC9BQ8N6N2 239 aa13.16□□□□□ -0.3
LYSMD3-204ENST00000509384 PRELID2Q8N945 189 aa13.16□□□□□ -0.3
LYSMD3-204ENST00000509384 KCTD6Q8NC69 237 aa13.16□□□□□ -0.3
LYSMD3-204ENST00000509384 HNRNPLLQ8WVV9 542 aaKnown RBP13.16□□□□□ -0.3
LYSMD3-204ENST00000509384 TEKT4Q8WW24 435 aa13.16□□□□□ -0.3
LYSMD3-204ENST00000509384 HERVK_113Q902F9 699 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms