RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 DNALI1O14645 258 aaPredicted RBP15.54■□□□□ 0.08
PHF3-209ENST00000509330 MCF2LO15068 1137 aa15.54■□□□□ 0.08
PHF3-209ENST00000509330 ITGB1P05556 798 aa15.54■□□□□ 0.08
PHF3-209ENST00000509330 PCK1P35558 622 aa15.54■□□□□ 0.08
PHF3-209ENST00000509330 CTCFP49711 727 aaPredicted RBP15.54■□□□□ 0.08
PHF3-209ENST00000509330 NOGQ13253 232 aa15.54■□□□□ 0.08
PHF3-209ENST00000509330 TIGD5Q53EQ6 642 aa15.54■□□□□ 0.08
PHF3-209ENST00000509330 HIBCHQ6NVY1 386 aaPredicted RBP15.54■□□□□ 0.08
PHF3-209ENST00000509330 P3H4Q92791 437 aa15.54■□□□□ 0.08
PHF3-209ENST00000509330 UPF3AQ9H1J1 476 aaKnown RBP15.54■□□□□ 0.08
PHF3-209ENST00000509330 MLXIPLQ9NP71 852 aa15.54■□□□□ 0.08
PHF3-209ENST00000509330 MRPL42Q9Y6G3 142 aaKnown RBP15.54■□□□□ 0.08
PHF3-209ENST00000509330 RALGAPA2Q2PPJ7 1873 aa15.54■□□□□ 0.08
PHF3-209ENST00000509330 EIF3HO15372 352 aaKnown RBP eCLIP15.54■□□□□ 0.082e-6■■■□□ 16.4
PHF3-209ENST00000509330 CREB1P16220 341 aa15.54■□□□□ 0.08
PHF3-209ENST00000509330 GPRIN1Q7Z2K8 1008 aa15.54■□□□□ 0.08
PHF3-209ENST00000509330 CCDC13Q8IYE1 715 aa15.54■□□□□ 0.08
PHF3-209ENST00000509330 ZBED8Q8IZ13 594 aa15.54■□□□□ 0.08
PHF3-209ENST00000509330 MGARPQ8TDB4 240 aa15.54■□□□□ 0.08
PHF3-209ENST00000509330 RSAD1Q9HA92 442 aa15.54■□□□□ 0.08
PHF3-209ENST00000509330 LRRC4Q9HBW1 653 aa15.54■□□□□ 0.08
PHF3-209ENST00000509330 LCMT1Q9UIC8 334 aa15.54■□□□□ 0.08
PHF3-209ENST00000509330 PRDM4Q9UKN5 801 aa15.54■□□□□ 0.08
PHF3-209ENST00000509330 TPX2Q9ULW0 747 aaKnown RBP15.54■□□□□ 0.08
PHF3-209ENST00000509330 CCT5P48643 541 aa15.53■□□□□ 0.08
PHF3-209ENST00000509330 SULT1E1P49888 294 aa15.53■□□□□ 0.08
PHF3-209ENST00000509330 EIF3BP55884 814 aaKnown RBP15.53■□□□□ 0.08
PHF3-209ENST00000509330 PPP2R2AP63151 447 aa15.53■□□□□ 0.08
PHF3-209ENST00000509330 LMNB2Q03252 620 aa15.53■□□□□ 0.08
PHF3-209ENST00000509330 DEFB115Q30KQ5 88 aa15.53■□□□□ 0.08
PHF3-209ENST00000509330 CLEC20AQ6ZU45 233 aa15.53■□□□□ 0.08
PHF3-209ENST00000509330 PCED1BQ96HM7 432 aa15.53■□□□□ 0.08
PHF3-209ENST00000509330 SYT15Q9BQS2 421 aa15.53■□□□□ 0.08
PHF3-209ENST00000509330 PCDH18Q9HCL0 1135 aa15.53■□□□□ 0.08
PHF3-209ENST00000509330 APOC4-APOC2K7ER74 178 aa15.53■□□□□ 0.08
PHF3-209ENST00000509330 TTC4O95801 387 aa15.53■□□□□ 0.08
PHF3-209ENST00000509330 ALDH1A1P00352 501 aa15.53■□□□□ 0.08
PHF3-209ENST00000509330 APOC2P02655 101 aa15.53■□□□□ 0.08
PHF3-209ENST00000509330 NPR3P17342 541 aa15.53■□□□□ 0.08
PHF3-209ENST00000509330 IL4RP24394 825 aa15.53■□□□□ 0.08
PHF3-209ENST00000509330 LRPAP1P30533 357 aa15.53■□□□□ 0.08
PHF3-209ENST00000509330 LSP1P33241 339 aa15.53■□□□□ 0.08
PHF3-209ENST00000509330 RPL22P35268 128 aaKnown RBP15.53■□□□□ 0.08
PHF3-209ENST00000509330 ACLYP53396 1101 aa15.53■□□□□ 0.08
PHF3-209ENST00000509330 STKLD1Q8NE28 680 aa15.53■□□□□ 0.08
PHF3-209ENST00000509330 PCDH19Q8TAB3 1148 aa15.53■□□□□ 0.08
PHF3-209ENST00000509330 NKD2Q969F2 451 aaPredicted RBP15.53■□□□□ 0.08
PHF3-209ENST00000509330 TMEM209Q96SK2 561 aa15.53■□□□□ 0.08
PHF3-209ENST00000509330 AP1G2O75843 785 aa15.52■□□□□ 0.08
PHF3-209ENST00000509330 ITGAVP06756 1048 aa15.52■□□□□ 0.08
PHF3-209ENST00000509330 SETSIPP0DME0 302 aa15.52■□□□□ 0.08
PHF3-209ENST00000509330 MDH1P40925 334 aaKnown RBP15.52■□□□□ 0.08
PHF3-209ENST00000509330 MAGEA4P43358 317 aa15.52■□□□□ 0.08
PHF3-209ENST00000509330 SKOR1P84550 965 aa15.52■□□□□ 0.08
PHF3-209ENST00000509330 SYPL2Q5VXT5 272 aa15.52■□□□□ 0.08
PHF3-209ENST00000509330 HACE1Q8IYU2 909 aa15.52■□□□□ 0.08
PHF3-209ENST00000509330 SIX6OS1Q8N1H7 587 aa15.52■□□□□ 0.08
PHF3-209ENST00000509330 TOP6BLQ8N6T0 577 aa15.52■□□□□ 0.08
PHF3-209ENST00000509330 KLHDC9Q8NEP7 349 aa15.52■□□□□ 0.08
PHF3-209ENST00000509330 VPS37BQ9H9H4 285 aa15.52■□□□□ 0.08
PHF3-209ENST00000509330 E7EVH7 732 aa15.52■□□□□ 0.07
PHF3-209ENST00000509330 SHOX2O60902 331 aaPredicted RBP15.52■□□□□ 0.07
PHF3-209ENST00000509330 WARSP23381 471 aaKnown RBP15.52■□□□□ 0.07
PHF3-209ENST00000509330 PTPN7P35236 360 aa15.52■□□□□ 0.07
PHF3-209ENST00000509330 TKTL1P51854 596 aa15.52■□□□□ 0.07
PHF3-209ENST00000509330 BCAR1P56945 870 aa15.52■□□□□ 0.07
PHF3-209ENST00000509330 SLC8A3P57103 927 aa15.52■□□□□ 0.07
PHF3-209ENST00000509330 PDIA2Q13087 525 aaKnown RBP15.52■□□□□ 0.07
PHF3-209ENST00000509330 AUHQ13825 339 aaKnown RBP15.52■□□□□ 0.07
PHF3-209ENST00000509330 CCSAPQ6IQ19 270 aaPredicted RBP15.52■□□□□ 0.07
PHF3-209ENST00000509330 RNF157Q96PX1 679 aa15.52■□□□□ 0.07
PHF3-209ENST00000509330 DUSP16Q9BY84 665 aa15.52■□□□□ 0.07
PHF3-209ENST00000509330 SLC38A7Q9NVC3 462 aa15.52■□□□□ 0.07
PHF3-209ENST00000509330 SRRDQ9UH36 339 aa15.52■□□□□ 0.07
PHF3-209ENST00000509330 AP4E1Q9UPM8 1137 aa15.52■□□□□ 0.07
PHF3-209ENST00000509330 NRP1O14786 923 aa15.51■□□□□ 0.07
PHF3-209ENST00000509330 KCNN4O15554 427 aa15.51■□□□□ 0.07
PHF3-209ENST00000509330 USP17L7P0C7H9 530 aa15.51■□□□□ 0.07
PHF3-209ENST00000509330 ROR1Q01973 937 aa15.51■□□□□ 0.07
PHF3-209ENST00000509330 GBE1Q04446 702 aa15.51■□□□□ 0.07
PHF3-209ENST00000509330 ANKRD20A8PQ5CZ79 823 aa15.51■□□□□ 0.07
PHF3-209ENST00000509330 TRMT10CQ7L0Y3 403 aaKnown RBP15.51■□□□□ 0.07
PHF3-209ENST00000509330 RNF180Q86T96 592 aa15.51■□□□□ 0.07
PHF3-209ENST00000509330 PQLC3Q8N755 202 aa15.51■□□□□ 0.07
PHF3-209ENST00000509330 EDEM1Q92611 657 aa15.51■□□□□ 0.07
PHF3-209ENST00000509330 ULBP1Q9BZM6 244 aa15.51■□□□□ 0.07
PHF3-209ENST00000509330 ETNK2Q9NVF9 386 aa15.51■□□□□ 0.07
PHF3-209ENST00000509330 PCDH10Q9P2E7 1040 aa15.51■□□□□ 0.07
PHF3-209ENST00000509330 DDX20Q9UHI6 824 aaKnown RBP15.51■□□□□ 0.07
PHF3-209ENST00000509330 NAALADL1Q9UQQ1 740 aa15.51■□□□□ 0.07
PHF3-209ENST00000509330 POC1B-GALNT4F8VUJ3 575 aa15.51■□□□□ 0.07
PHF3-209ENST00000509330 FAM200BP0CF97 657 aa15.51■□□□□ 0.07
PHF3-209ENST00000509330 IFNAR2P48551 515 aa15.51■□□□□ 0.07
PHF3-209ENST00000509330 LRRC14Q15048 493 aa15.51■□□□□ 0.07
PHF3-209ENST00000509330 RNASEH2BQ5TBB1 312 aaKnown RBP15.51■□□□□ 0.07
PHF3-209ENST00000509330 AGBL2Q5U5Z8 902 aa15.51■□□□□ 0.07
PHF3-209ENST00000509330 SLC26A9Q7LBE3 791 aa15.51■□□□□ 0.07
PHF3-209ENST00000509330 PLD5Q8N7P1 536 aa15.51■□□□□ 0.07
PHF3-209ENST00000509330 PCDH9Q9HC56 1237 aa15.51■□□□□ 0.07
PHF3-209ENST00000509330 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.51■□□□□ 0.079e-6■□□□□ 9.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms