RNA–Protein interactions for RNA: ENST00000509328.1

HOXC6-204, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-204ENST00000509328 CNGB3Q9NQW8 809 aa21.22■□□□□ 0.99
HOXC6-204ENST00000509328 THG1LQ9NWX6 298 aaKnown RBP21.22■□□□□ 0.99
HOXC6-204ENST00000509328 FBXL21Q9UKT6 434 aa21.22■□□□□ 0.99
HOXC6-204ENST00000509328 COL4A2P08572 1712 aa21.21■□□□□ 0.99
HOXC6-204ENST00000509328 TMEM221A6NGB7 291 aa21.21■□□□□ 0.99
HOXC6-204ENST00000509328 M0R296 226 aa21.21■□□□□ 0.99
HOXC6-204ENST00000509328 ZNF263O14978 683 aa21.21■□□□□ 0.99
HOXC6-204ENST00000509328 CHADO15335 359 aa21.21■□□□□ 0.99
HOXC6-204ENST00000509328 COCHO43405 550 aa21.21■□□□□ 0.99
HOXC6-204ENST00000509328 TLR5O60602 858 aa21.21■□□□□ 0.99
HOXC6-204ENST00000509328 MBL2P11226 248 aaPredicted RBP21.21■□□□□ 0.99
HOXC6-204ENST00000509328 LCP1P13796 627 aa21.21■□□□□ 0.99
HOXC6-204ENST00000509328 CYP11B1P15538 503 aa21.21■□□□□ 0.99
HOXC6-204ENST00000509328 KRT9P35527 623 aa21.21■□□□□ 0.99
HOXC6-204ENST00000509328 SOX5P35711 763 aa21.21■□□□□ 0.99
HOXC6-204ENST00000509328 STAT1P42224 750 aa21.21■□□□□ 0.99
HOXC6-204ENST00000509328 RPL34P49207 117 aaKnown RBP21.21■□□□□ 0.99
HOXC6-204ENST00000509328 UBASH3AP57075 661 aa21.21■□□□□ 0.99
HOXC6-204ENST00000509328 ARHGAP29Q52LW3 1261 aa21.21■□□□□ 0.99
HOXC6-204ENST00000509328 SCD5Q86SK9 330 aa21.21■□□□□ 0.99
HOXC6-204ENST00000509328 ZNF276Q8N554 614 aa21.21■□□□□ 0.99
HOXC6-204ENST00000509328 OSER1Q9NX31 292 aa21.21■□□□□ 0.99
HOXC6-204ENST00000509328 CLIC5Q9NZA1 410 aa21.21■□□□□ 0.99
HOXC6-204ENST00000509328 NAGPAQ9UK23 515 aa21.21■□□□□ 0.99
HOXC6-204ENST00000509328 GFPT2O94808 682 aa21.2■□□□□ 0.98
HOXC6-204ENST00000509328 RALAP11233 206 aa21.2■□□□□ 0.98
HOXC6-204ENST00000509328 RARGP13631 454 aa21.2■□□□□ 0.98
HOXC6-204ENST00000509328 ACADSBP45954 432 aa21.2■□□□□ 0.98
HOXC6-204ENST00000509328 PLCB2Q00722 1185 aa21.2■□□□□ 0.98
HOXC6-204ENST00000509328 USP4Q13107 963 aa21.2■□□□□ 0.98
HOXC6-204ENST00000509328 ZNF77Q15935 545 aa21.2■□□□□ 0.98
HOXC6-204ENST00000509328 CACNA2D4Q7Z3S7 1137 aa21.2■□□□□ 0.98
HOXC6-204ENST00000509328 TADA2BQ86TJ2 420 aa21.2■□□□□ 0.98
HOXC6-204ENST00000509328 SH3RF2Q8TEC5 729 aa21.2■□□□□ 0.98
HOXC6-204ENST00000509328 DNASE1L2Q92874 299 aa21.2■□□□□ 0.98
HOXC6-204ENST00000509328 NACA2Q9H009 215 aa21.2■□□□□ 0.98
HOXC6-204ENST00000509328 LHX5Q9H2C1 402 aa21.2■□□□□ 0.98
HOXC6-204ENST00000509328 TRPV5Q9NQA5 729 aa21.2■□□□□ 0.98
HOXC6-204ENST00000509328 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.2■□□□□ 0.98
HOXC6-204ENST00000509328 CPQQ9Y646 472 aa21.2■□□□□ 0.98
HOXC6-204ENST00000509328 GPR37L1O60883 481 aa21.19■□□□□ 0.98
HOXC6-204ENST00000509328 GABBR2O75899 941 aa21.19■□□□□ 0.98
HOXC6-204ENST00000509328 FBXO21O94952 628 aa21.19■□□□□ 0.98
HOXC6-204ENST00000509328 ATP5C1P36542 298 aaKnown RBP21.19■□□□□ 0.98
HOXC6-204ENST00000509328 YWHAGP61981 247 aaKnown RBP eCLIP21.19■□□□□ 0.98
HOXC6-204ENST00000509328 CC2D1AQ6P1N0 951 aaPredicted RBP21.19■□□□□ 0.98
HOXC6-204ENST00000509328 KLHDC10Q6PID8 442 aa21.19■□□□□ 0.98
HOXC6-204ENST00000509328 BHLHA9Q7RTU4 235 aa21.19■□□□□ 0.98
HOXC6-204ENST00000509328 DDX42Q86XP3 938 aaKnown RBP eCLIP21.19■□□□□ 0.98
HOXC6-204ENST00000509328 RIN3Q8TB24 985 aa21.19■□□□□ 0.98
HOXC6-204ENST00000509328 IRGQQ8WZA9 623 aa21.19■□□□□ 0.98
HOXC6-204ENST00000509328 CDK5RAP1Q96SZ6 601 aaKnown RBP21.19■□□□□ 0.98
HOXC6-204ENST00000509328 SLC4A5Q9BY07 1137 aa21.19■□□□□ 0.98
HOXC6-204ENST00000509328 C11orf16Q9NQ32 467 aa21.19■□□□□ 0.98
HOXC6-204ENST00000509328 ST7Q9NRC1 585 aa21.19■□□□□ 0.98
HOXC6-204ENST00000509328 CEP83Q9Y592 693 aa21.19■□□□□ 0.98
HOXC6-204ENST00000509328 LEFTY2O00292 366 aa21.18■□□□□ 0.98
HOXC6-204ENST00000509328 PIK3R2O00459 728 aa21.18■□□□□ 0.98
HOXC6-204ENST00000509328 DAOAP59103 153 aa21.18■□□□□ 0.98
HOXC6-204ENST00000509328 ZXDBP98169 803 aa21.18■□□□□ 0.98
HOXC6-204ENST00000509328 MTF1Q14872 753 aa21.18■□□□□ 0.98
HOXC6-204ENST00000509328 TMEM31Q5JXX7 168 aa21.18■□□□□ 0.98
HOXC6-204ENST00000509328 NOP9Q86U38 636 aaKnown RBP21.18■□□□□ 0.98
HOXC6-204ENST00000509328 PASD1Q8IV76 773 aa21.18■□□□□ 0.98
HOXC6-204ENST00000509328 WDTC1Q8N5D0 677 aa21.18■□□□□ 0.98
HOXC6-204ENST00000509328 KIAA1958Q8N8K9 716 aa21.18■□□□□ 0.98
HOXC6-204ENST00000509328 RNF214Q8ND24 703 aa21.18■□□□□ 0.98
HOXC6-204ENST00000509328 EPS8L1Q8TE68 723 aa21.18■□□□□ 0.98
HOXC6-204ENST00000509328 DDX1Q92499 740 aaKnown RBP21.18■□□□□ 0.98
HOXC6-204ENST00000509328 NDRG1Q92597 394 aaKnown RBP21.18■□□□□ 0.98
HOXC6-204ENST00000509328 NOX5Q96PH1 765 aa21.18■□□□□ 0.98
HOXC6-204ENST00000509328 PDCL3Q9H2J4 239 aa21.18■□□□□ 0.98
HOXC6-204ENST00000509328 SMPD4Q9NXE4 827 aa21.18■□□□□ 0.98
HOXC6-204ENST00000509328 CYTH4Q9UIA0 394 aa21.18■□□□□ 0.98
HOXC6-204ENST00000509328 CA14Q9ULX7 337 aa21.18■□□□□ 0.98
HOXC6-204ENST00000509328 FAM86C2PA6NEL3 165 aa21.17■□□□□ 0.98
HOXC6-204ENST00000509328 ARNTLO00327 626 aa21.17■□□□□ 0.98
HOXC6-204ENST00000509328 TBX18O95935 607 aa21.17■□□□□ 0.98
HOXC6-204ENST00000509328 PDCLQ13371 301 aa21.17■□□□□ 0.98
HOXC6-204ENST00000509328 SLC44A4Q53GD3 710 aa21.17■□□□□ 0.98
HOXC6-204ENST00000509328 C10orf120Q5SQS8 335 aa21.17■□□□□ 0.98
HOXC6-204ENST00000509328 BTBD8Q5XKL5 378 aa21.17■□□□□ 0.98
HOXC6-204ENST00000509328 BMP8AQ7Z5Y6 402 aa21.17■□□□□ 0.98
HOXC6-204ENST00000509328 TMEM110Q86TL2 294 aa21.17■□□□□ 0.98
HOXC6-204ENST00000509328 ZNF677Q86XU0 584 aa21.17■□□□□ 0.98
HOXC6-204ENST00000509328 SIX5Q8N196 739 aa21.17■□□□□ 0.98
HOXC6-204ENST00000509328 TTC16Q8NEE8 873 aa21.17■□□□□ 0.98
HOXC6-204ENST00000509328 CSGALNACT1Q8TDX6 532 aa21.17■□□□□ 0.98
HOXC6-204ENST00000509328 ZFYVE19Q96K21 471 aa21.17■□□□□ 0.98
HOXC6-204ENST00000509328 FAM83CQ9BQN1 747 aa21.17■□□□□ 0.98
HOXC6-204ENST00000509328 ARHGEF3Q9NR81 526 aa21.17■□□□□ 0.98
HOXC6-204ENST00000509328 GKN1Q9NS71 199 aa21.17■□□□□ 0.98
HOXC6-204ENST00000509328 IFNKQ9P0W0 207 aa21.17■□□□□ 0.98
HOXC6-204ENST00000509328 DNMT3LQ9UJW3 386 aa21.17■□□□□ 0.98
HOXC6-204ENST00000509328 MYO6Q9UM54 1294 aa21.17■□□□□ 0.98
HOXC6-204ENST00000509328 KRBA1A5PL33 1030 aa21.16■□□□□ 0.98
HOXC6-204ENST00000509328 YJEFN3A6XGL0 299 aa21.16■□□□□ 0.98
HOXC6-204ENST00000509328 E7ENQ6 273 aa21.16■□□□□ 0.98
HOXC6-204ENST00000509328 SART1O43290 800 aaKnown RBP21.16■□□□□ 0.98
HOXC6-204ENST00000509328 PDGFRLQ15198 375 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms