RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 TMED8Q6PL24 325 aaPredicted RBP2.7□□□□□ -1.98
XRCC4-204ENST00000509268 PTCHD4Q6ZW05 846 aa2.7□□□□□ -1.98
XRCC4-204ENST00000509268 RTL10Q7L3V2 364 aa2.7□□□□□ -1.98
XRCC4-204ENST00000509268 STRA8Q7Z7C7 330 aa2.7□□□□□ -1.98
XRCC4-204ENST00000509268 KIAA0907Q7Z7F0 614 aaPredicted RBP2.7□□□□□ -1.98
XRCC4-204ENST00000509268 C3orf20Q8ND61 904 aa2.7□□□□□ -1.98
XRCC4-204ENST00000509268 STAG1Q8WVM7 1258 aa2.7□□□□□ -1.98
XRCC4-204ENST00000509268 RBM38Q9H0Z9 239 aaKnown RBP2.7□□□□□ -1.98
XRCC4-204ENST00000509268 C6orf106Q9H6K1 298 aaPredicted RBP2.7□□□□□ -1.98
XRCC4-204ENST00000509268 SNX15Q9NRS6 342 aa2.7□□□□□ -1.98
XRCC4-204ENST00000509268 PCDHA12Q9UN75 941 aa2.7□□□□□ -1.98
XRCC4-204ENST00000509268 A0A0B4J293 547 aa2.69□□□□□ -1.98
XRCC4-204ENST00000509268 A0A1B0GUV1 79 aa2.69□□□□□ -1.98
XRCC4-204ENST00000509268 TPD52L2O43399 206 aaKnown RBP2.69□□□□□ -1.98
XRCC4-204ENST00000509268 PRKD3O94806 890 aa2.69□□□□□ -1.98
XRCC4-204ENST00000509268 MAP4K4O95819 1239 aaPredicted RBP2.69□□□□□ -1.98
XRCC4-204ENST00000509268 IBSPP21815 317 aaPredicted RBP2.69□□□□□ -1.98
XRCC4-204ENST00000509268 ERVK-21P61565 698 aa2.69□□□□□ -1.98
XRCC4-204ENST00000509268 KCNB1Q14721 858 aa2.69□□□□□ -1.98
XRCC4-204ENST00000509268 PTGR1Q14914 329 aa2.69□□□□□ -1.98
XRCC4-204ENST00000509268 CC2D1BQ5T0F9 858 aaKnown RBP2.69□□□□□ -1.98
XRCC4-204ENST00000509268 FAM57BQ71RH2 274 aa2.69□□□□□ -1.98
XRCC4-204ENST00000509268 ZCRB1Q8TBF4 217 aaKnown RBP2.69□□□□□ -1.98
XRCC4-204ENST00000509268 TNPO1Q92973 898 aaKnown RBP2.69□□□□□ -1.98
XRCC4-204ENST00000509268 HS6ST2Q96MM7 605 aa2.69□□□□□ -1.98
XRCC4-204ENST00000509268 MRPL46Q9H2W6 279 aaKnown RBP2.69□□□□□ -1.98
XRCC4-204ENST00000509268 CHPF2Q9P2E5 772 aa2.69□□□□□ -1.98
XRCC4-204ENST00000509268 KCNG2Q9UJ96 466 aa2.69□□□□□ -1.98
XRCC4-204ENST00000509268 COL2A1P02458 1487 aaPredicted RBP2.68□□□□□ -1.98
XRCC4-204ENST00000509268 TMEM272A0A1B0GTI8 110 aa2.68□□□□□ -1.98
XRCC4-204ENST00000509268 PKMP14618 531 aaKnown RBP2.68□□□□□ -1.98
XRCC4-204ENST00000509268 COMPP49747 757 aaPredicted RBP2.68□□□□□ -1.98
XRCC4-204ENST00000509268 STAT4Q14765 748 aa2.68□□□□□ -1.98
XRCC4-204ENST00000509268 SLC4A8Q2Y0W8 1093 aa2.68□□□□□ -1.98
XRCC4-204ENST00000509268 DCAF12L1Q5VU92 463 aa2.68□□□□□ -1.98
XRCC4-204ENST00000509268 DPY19L3Q6ZPD9 716 aa2.68□□□□□ -1.98
XRCC4-204ENST00000509268 SRGAP1Q7Z6B7 1085 aa2.68□□□□□ -1.98
XRCC4-204ENST00000509268 EXOC8Q8IYI6 725 aa2.68□□□□□ -1.98
XRCC4-204ENST00000509268 TMEM199Q8N511 208 aa2.68□□□□□ -1.98
XRCC4-204ENST00000509268 SLC44A5Q8NCS7 719 aa2.68□□□□□ -1.98
XRCC4-204ENST00000509268 MAFAQ8NHW3 353 aaPredicted RBP2.68□□□□□ -1.98
XRCC4-204ENST00000509268 PSMD1Q99460 953 aa2.68□□□□□ -1.98
XRCC4-204ENST00000509268 FZD3Q9NPG1 666 aa2.68□□□□□ -1.98
XRCC4-204ENST00000509268 DDX56Q9NY93 547 aaKnown RBP2.68□□□□□ -1.98
XRCC4-204ENST00000509268 SCN5AQ14524 2016 aa2.68□□□□□ -1.98
XRCC4-204ENST00000509268 CCDC194A0A1B0GVG4 234 aa2.67□□□□□ -1.98
XRCC4-204ENST00000509268 C2CD4BA6NLJ0 364 aa2.67□□□□□ -1.98
XRCC4-204ENST00000509268 PODXLO00592 558 aa2.67□□□□□ -1.98
XRCC4-204ENST00000509268 INPPL1O15357 1258 aa2.67□□□□□ -1.98
XRCC4-204ENST00000509268 CYP2C9P11712 490 aa2.67□□□□□ -1.98
XRCC4-204ENST00000509268 TMPRSS15P98073 1019 aa2.67□□□□□ -1.98
XRCC4-204ENST00000509268 AMPD3Q01432 767 aa2.67□□□□□ -1.98
XRCC4-204ENST00000509268 CFHR3Q02985 330 aa2.67□□□□□ -1.98
XRCC4-204ENST00000509268 MYO1EQ12965 1108 aa2.67□□□□□ -1.98
XRCC4-204ENST00000509268 KLF1Q13351 362 aaPredicted RBP2.67□□□□□ -1.98
XRCC4-204ENST00000509268 CLUL1Q15846 466 aa2.67□□□□□ -1.98
XRCC4-204ENST00000509268 PFKFB3Q16875 520 aaPredicted RBP2.67□□□□□ -1.98
XRCC4-204ENST00000509268 LY6KQ17RY6 165 aa2.67□□□□□ -1.98
XRCC4-204ENST00000509268 CEP85LQ5SZL2 805 aa2.67□□□□□ -1.98
XRCC4-204ENST00000509268 TRAPPC11Q7Z392 1133 aa2.67□□□□□ -1.98
XRCC4-204ENST00000509268 OIT3Q8WWZ8 545 aa2.67□□□□□ -1.98
XRCC4-204ENST00000509268 COA7Q96BR5 231 aa2.67□□□□□ -1.98
XRCC4-204ENST00000509268 PHF21BQ96EK2 531 aa2.67□□□□□ -1.98
XRCC4-204ENST00000509268 PRDM16Q9HAZ2 1276 aa2.67□□□□□ -1.98
XRCC4-204ENST00000509268 SPC25Q9HBM1 224 aa2.67□□□□□ -1.98
XRCC4-204ENST00000509268 HIF1ANQ9NWT6 349 aa2.67□□□□□ -1.98
XRCC4-204ENST00000509268 NCKIPSDQ9NZQ3 722 aa2.67□□□□□ -1.98
XRCC4-204ENST00000509268 COG5Q9UP83 839 aa2.67□□□□□ -1.98
XRCC4-204ENST00000509268 PLEKHM1Q9Y4G2 1056 aa2.67□□□□□ -1.98
XRCC4-204ENST00000509268 hCG_1984214I3L0E3 225 aa2.66□□□□□ -1.98
XRCC4-204ENST00000509268 PEX14O75381 377 aa2.66□□□□□ -1.98
XRCC4-204ENST00000509268 DDNO94850 711 aaPredicted RBP2.66□□□□□ -1.98
XRCC4-204ENST00000509268 CLSTN1O94985 981 aa2.66□□□□□ -1.98
XRCC4-204ENST00000509268 ACAA1P09110 424 aaPredicted RBP2.66□□□□□ -1.98
XRCC4-204ENST00000509268 CPEP16870 476 aa2.66□□□□□ -1.98
XRCC4-204ENST00000509268 C5AR1P21730 350 aa2.66□□□□□ -1.98
XRCC4-204ENST00000509268 ADORA2AP29274 412 aa2.66□□□□□ -1.98
XRCC4-204ENST00000509268 VEGFCP49767 419 aa2.66□□□□□ -1.98
XRCC4-204ENST00000509268 DIO1P49895 249 aa2.66□□□□□ -1.98
XRCC4-204ENST00000509268 ERVFC1-1P60608 527 aa2.66□□□□□ -1.98
XRCC4-204ENST00000509268 WASHC2DQ5SRD0 308 aa2.66□□□□□ -1.98
XRCC4-204ENST00000509268 THEMIS2Q5TEJ8 643 aa2.66□□□□□ -1.98
XRCC4-204ENST00000509268 MORC1Q86VD1 984 aa2.66□□□□□ -1.98
XRCC4-204ENST00000509268 JADE3Q92613 823 aa2.66□□□□□ -1.98
XRCC4-204ENST00000509268 HIC2Q96JB3 615 aa2.66□□□□□ -1.98
XRCC4-204ENST00000509268 GATA5Q9BWX5 397 aaPredicted RBP2.66□□□□□ -1.98
XRCC4-204ENST00000509268 TM6SF1Q9BZW5 370 aa2.66□□□□□ -1.98
XRCC4-204ENST00000509268 MYH16Q9H6N6 1097 aa2.66□□□□□ -1.98
XRCC4-204ENST00000509268 CXorf36Q9H7Y0 433 aa2.66□□□□□ -1.98
XRCC4-204ENST00000509268 PLK2Q9NYY3 685 aa2.66□□□□□ -1.98
XRCC4-204ENST00000509268 GABBR1Q9UBS5 961 aa2.66□□□□□ -1.98
XRCC4-204ENST00000509268 G3BP2Q9UN86 482 aaKnown RBP2.66□□□□□ -1.98
XRCC4-204ENST00000509268 MRPS17Q9Y2R5 130 aaKnown RBP2.66□□□□□ -1.98
XRCC4-204ENST00000509268 PCDHGB1Q9Y5G3 927 aa2.66□□□□□ -1.98
XRCC4-204ENST00000509268 SLC16A6O15403 523 aa2.66□□□□□ -1.98
XRCC4-204ENST00000509268 HOXC6P09630 235 aa2.66□□□□□ -1.98
XRCC4-204ENST00000509268 XRCC6P12956 609 aaKnown RBP eCLIP2.66□□□□□ -1.98
XRCC4-204ENST00000509268 SOX5P35711 763 aa2.66□□□□□ -1.98
XRCC4-204ENST00000509268 ART1P52961 327 aa2.66□□□□□ -1.98
XRCC4-204ENST00000509268 POU3F1Q03052 451 aaPredicted RBP2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms