RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 TRIM69Q86WT6 500 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 KHSRPQ92945 711 aaKnown RBP eCLIP4.08□□□□□ -1.766e-7■■■■■ 30.7
NEDD4-209ENST00000508871 CCDC106Q9BWC9 280 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 MAGEH1Q9H213 219 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 SH2B1Q9NRF2 756 aaPredicted RBP4.08□□□□□ -1.76
NEDD4-209ENST00000508871 KLHL8Q9P2G9 620 aaPredicted RBP4.08□□□□□ -1.76
NEDD4-209ENST00000508871 CACNA1SQ13698 1873 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 AFF2P51816 1311 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 DCDC2BA2VCK2 349 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 MEI4A8MW99 385 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 PDE2AO00408 941 aaPredicted RBP4.08□□□□□ -1.76
NEDD4-209ENST00000508871 VILLO15195 856 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 TNFRSF6BO95407 300 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 EYA4O95677 639 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 PENKP01210 267 aaPredicted RBP4.08□□□□□ -1.76
NEDD4-209ENST00000508871 PBLDP30039 288 aaPredicted RBP4.08□□□□□ -1.76
NEDD4-209ENST00000508871 GPR85P60893 370 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 NOMO3P69849 1222 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 SCRN1Q12765 414 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 TFCP2Q12800 502 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 RAB32Q13637 225 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 GALNT3Q14435 633 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 HABP2Q14520 560 aaPredicted RBP4.08□□□□□ -1.76
NEDD4-209ENST00000508871 ARHGEF6Q15052 776 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 ARHGAP44Q17R89 818 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 CTXN3Q4LDR2 81 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 ZC2HC1CQ53FD0 456 aaPredicted RBP4.08□□□□□ -1.76
NEDD4-209ENST00000508871 SFMBT2Q5VUG0 894 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 TRIM72Q6ZMU5 477 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 YAF2Q8IY57 180 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 ST13P4Q8IZP2 240 aaPredicted RBP4.08□□□□□ -1.76
NEDD4-209ENST00000508871 LRRC71Q8N4P6 559 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 KLHL23Q8NBE8 558 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 MAFAQ8NHW3 353 aaPredicted RBP4.08□□□□□ -1.76
NEDD4-209ENST00000508871 SLC7A14Q8TBB6 771 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 KIAA1143Q96AT1 154 aaPredicted RBP4.08□□□□□ -1.76
NEDD4-209ENST00000508871 MIEF2Q96C03 454 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 OR10A4Q9H209 315 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 CLEC4MQ9H2X3 399 aaPredicted RBP4.08□□□□□ -1.76
NEDD4-209ENST00000508871 C10orf88Q9H8K7 445 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 UNKLQ9H9P5 680 aaKnown RBP4.08□□□□□ -1.76
NEDD4-209ENST00000508871 NARFQ9UHQ1 456 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 ATPIF1Q9UII2 106 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 C10orf71Q711Q0 1435 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 FAM221AA4D161 298 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 SLC25A17O43808 307 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 FKTNO75072 461 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 KRT14P02533 472 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 UBTFL6P0CB48 400 aaPredicted RBP4.08□□□□□ -1.76
NEDD4-209ENST00000508871 GSTM5P46439 218 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 SLC8A3P57103 927 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 BPIFB3P59826 476 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 CBFBQ13951 182 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 SEC23BQ15437 767 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 Q5PR19 223 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 KRT40Q6A162 431 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 MCTP1Q6DN14 999 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 GPR149Q86SP6 731 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 LURAP1LQ8IV03 231 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.08□□□□□ -1.76
NEDD4-209ENST00000508871 GIMAP7Q8NHV1 300 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 SLC4A9Q96Q91 983 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 KRT12Q99456 494 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 SMYD2Q9NRG4 433 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 SAMSN1Q9NSI8 373 aaKnown RBP4.08□□□□□ -1.76
NEDD4-209ENST00000508871 NID2Q14112 1375 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 SMIM30A4D0T7 59 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 LRRD1A4D1F6 860 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 BTBD18B2RXH4 712 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 KRIT1O00522 736 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 POLR2DO15514 142 aaKnown RBP4.08□□□□□ -1.76
NEDD4-209ENST00000508871 DNAJB6O75190 326 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 PLATP00750 562 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 MBP02144 154 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 ANXA1P04083 346 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 RPSAP08865 295 aaKnown RBP4.08□□□□□ -1.76
NEDD4-209ENST00000508871 LCP1P13796 627 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 KCNC1P48547 511 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 RCAN1P53805 252 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 PCDH1Q08174 1060 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 PPP1R8Q12972 351 aaKnown RBP4.08□□□□□ -1.76
NEDD4-209ENST00000508871 LONRF2Q1L5Z9 754 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 FOXB2Q5VYV0 432 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 C15orf52Q6ZUT6 534 aaKnown RBP4.08□□□□□ -1.76
NEDD4-209ENST00000508871 LSMEM1Q8N8F7 131 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 VGLL2Q8N8G2 317 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 LINC00116Q8NCU8 138 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 PPFIBP2Q8ND30 876 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 CPT1CQ8TCG5 803 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 OTUD7AQ8TE49 926 aaPredicted RBP4.08□□□□□ -1.76
NEDD4-209ENST00000508871 RHBDD1Q8TEB9 315 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 DPF2Q92785 391 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 KCNJ9Q92806 393 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 KAT5Q92993 513 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 GTPBP3Q969Y2 492 aaKnown RBP4.08□□□□□ -1.76
NEDD4-209ENST00000508871 ASIC4Q96FT7 647 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 ZKSCAN3Q9BRR0 538 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 TRPV6Q9H1D0 765 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 TRIM36Q9NQ86 728 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 GTSE1Q9NYZ3 720 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms