RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 TTC30AQ86WT1 665 aa10.67□□□□□ -0.7
UBE2D3-227ENST00000508818 TTC39CQ8N584 583 aa10.67□□□□□ -0.7
UBE2D3-227ENST00000508818 C12orf29Q8N999 325 aa10.67□□□□□ -0.7
UBE2D3-227ENST00000508818 TAS1R2Q8TE23 839 aa10.67□□□□□ -0.7
UBE2D3-227ENST00000508818 OTUB2Q96DC9 234 aa10.67□□□□□ -0.7
UBE2D3-227ENST00000508818 CYFIP2Q96F07 1278 aa10.67□□□□□ -0.7
UBE2D3-227ENST00000508818 LOXL4Q96JB6 756 aa10.67□□□□□ -0.7
UBE2D3-227ENST00000508818 HEXIM2Q96MH2 286 aaKnown RBP10.67□□□□□ -0.7
UBE2D3-227ENST00000508818 HNRNPABQ99729 332 aaKnown RBP10.67□□□□□ -0.7
UBE2D3-227ENST00000508818 SMOQ99835 787 aa10.67□□□□□ -0.7
UBE2D3-227ENST00000508818 RTKNQ9BST9 563 aa10.67□□□□□ -0.7
UBE2D3-227ENST00000508818 NIF3L1Q9GZT8 377 aa10.67□□□□□ -0.7
UBE2D3-227ENST00000508818 GOLPH3LQ9H4A5 285 aa10.67□□□□□ -0.7
UBE2D3-227ENST00000508818 CCSER2Q9H7U1 834 aa10.67□□□□□ -0.7
UBE2D3-227ENST00000508818 TMEM8AQ9HCN3 771 aa10.67□□□□□ -0.7
UBE2D3-227ENST00000508818 PARD6AQ9NPB6 346 aa10.67□□□□□ -0.7
UBE2D3-227ENST00000508818 POLR3BQ9NW08 1133 aaPredicted RBP10.67□□□□□ -0.7
UBE2D3-227ENST00000508818 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.67□□□□□ -0.7
UBE2D3-227ENST00000508818 GREB1Q4ZG55 1949 aa10.66□□□□□ -0.7
UBE2D3-227ENST00000508818 ANAPC1Q9H1A4 1944 aa10.66□□□□□ -0.7
UBE2D3-227ENST00000508818 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.66□□□□□ -0.7
UBE2D3-227ENST00000508818 TNFRSF10BO14763 440 aa10.66□□□□□ -0.7
UBE2D3-227ENST00000508818 ALDH1A2O94788 518 aa10.66□□□□□ -0.7
UBE2D3-227ENST00000508818 RHOBTB1O94844 696 aa10.66□□□□□ -0.7
UBE2D3-227ENST00000508818 IRF1P10914 325 aa10.66□□□□□ -0.7
UBE2D3-227ENST00000508818 ADH5P11766 374 aa10.66□□□□□ -0.7
UBE2D3-227ENST00000508818 ACO1P21399 889 aaKnown RBP10.66□□□□□ -0.7
UBE2D3-227ENST00000508818 TGM1P22735 817 aa10.66□□□□□ -0.7
UBE2D3-227ENST00000508818 GBP1P32455 592 aa10.66□□□□□ -0.7
UBE2D3-227ENST00000508818 ATP5C1P36542 298 aaKnown RBP10.66□□□□□ -0.7
UBE2D3-227ENST00000508818 OPRD1P41143 372 aa10.66□□□□□ -0.7
UBE2D3-227ENST00000508818 SLC6A11P48066 632 aa10.66□□□□□ -0.7
UBE2D3-227ENST00000508818 TUBP50607 506 aa10.66□□□□□ -0.7
UBE2D3-227ENST00000508818 NUCB2P80303 420 aa10.66□□□□□ -0.7
UBE2D3-227ENST00000508818 MRPS21P82921 87 aaKnown RBP10.66□□□□□ -0.7
UBE2D3-227ENST00000508818 PPP3CAQ08209 521 aa10.66□□□□□ -0.7
UBE2D3-227ENST00000508818 PNOCQ13519 176 aa10.66□□□□□ -0.7
UBE2D3-227ENST00000508818 ELF2Q15723 593 aa10.66□□□□□ -0.7
UBE2D3-227ENST00000508818 ANO4Q32M45 955 aa10.66□□□□□ -0.7
UBE2D3-227ENST00000508818 EDRF1Q3B7T1 1238 aa10.66□□□□□ -0.7
UBE2D3-227ENST00000508818 USP39Q53GS9 565 aaKnown RBP10.66□□□□□ -0.7
UBE2D3-227ENST00000508818 C1orf220Q5T0J3 134 aa10.66□□□□□ -0.7
UBE2D3-227ENST00000508818 TCERG1LQ5VWI1 586 aa10.66□□□□□ -0.7
UBE2D3-227ENST00000508818 SNX30Q5VWJ9 437 aa10.66□□□□□ -0.7
UBE2D3-227ENST00000508818 RHBDF2Q6PJF5 856 aa10.66□□□□□ -0.7
UBE2D3-227ENST00000508818 PRR23CQ6ZRP0 262 aa10.66□□□□□ -0.7
UBE2D3-227ENST00000508818 TADA2BQ86TJ2 420 aa10.66□□□□□ -0.7
UBE2D3-227ENST00000508818 KBTBD6Q86V97 674 aa10.66□□□□□ -0.7
UBE2D3-227ENST00000508818 CCDC33Q8N5R6 958 aa10.66□□□□□ -0.7
UBE2D3-227ENST00000508818 C12orf50Q8NA57 414 aaPredicted RBP10.66□□□□□ -0.7
UBE2D3-227ENST00000508818 NETO1Q8TDF5 533 aa10.66□□□□□ -0.7
UBE2D3-227ENST00000508818 USP33Q8TEY7 942 aa10.66□□□□□ -0.7
UBE2D3-227ENST00000508818 GTPBP4Q9BZE4 634 aaKnown RBP10.66□□□□□ -0.7
UBE2D3-227ENST00000508818 ARRDC1-AS1Q9H2J1 176 aa10.66□□□□□ -0.7
UBE2D3-227ENST00000508818 CSNK1G1Q9HCP0 422 aa10.66□□□□□ -0.7
UBE2D3-227ENST00000508818 ARHGEF4Q9NR80 690 aa10.66□□□□□ -0.7
UBE2D3-227ENST00000508818 IL37Q9NZH6 218 aa10.66□□□□□ -0.7
UBE2D3-227ENST00000508818 HMGXB4Q9UGU5 601 aa10.66□□□□□ -0.7
UBE2D3-227ENST00000508818 EBF1Q9UH73 591 aa10.66□□□□□ -0.7
UBE2D3-227ENST00000508818 LSM7Q9UK45 103 aaKnown RBP10.66□□□□□ -0.7
UBE2D3-227ENST00000508818 SDK1Q7Z5N4 2213 aa10.66□□□□□ -0.7
UBE2D3-227ENST00000508818 PTPRDP23468 1912 aa10.66□□□□□ -0.7
UBE2D3-227ENST00000508818 DCDC2BA2VCK2 349 aa10.65□□□□□ -0.7
UBE2D3-227ENST00000508818 TBC1D3BA6NDS4 549 aa10.65□□□□□ -0.7
UBE2D3-227ENST00000508818 K7EQS6 105 aa10.65□□□□□ -0.7
UBE2D3-227ENST00000508818 RIOK3O14730 519 aaKnown RBP10.65□□□□□ -0.7
UBE2D3-227ENST00000508818 ZBTB24O43167 697 aaPredicted RBP10.65□□□□□ -0.7
UBE2D3-227ENST00000508818 TLR5O60602 858 aa10.65□□□□□ -0.7
UBE2D3-227ENST00000508818 BEST1O76090 585 aa10.65□□□□□ -0.7
UBE2D3-227ENST00000508818 KAT7O95251 611 aa10.65□□□□□ -0.7
UBE2D3-227ENST00000508818 EIF2DP41214 584 aaKnown RBP10.65□□□□□ -0.7
UBE2D3-227ENST00000508818 GRIA2P42262 883 aa10.65□□□□□ -0.7
UBE2D3-227ENST00000508818 MXI1P50539 228 aa10.65□□□□□ -0.7
UBE2D3-227ENST00000508818 SLC8A3P57103 927 aa10.65□□□□□ -0.7
UBE2D3-227ENST00000508818 KDSRQ06136 332 aa10.65□□□□□ -0.7
UBE2D3-227ENST00000508818 INCA1Q0VD86 236 aa10.65□□□□□ -0.7
UBE2D3-227ENST00000508818 AASDHQ4L235 1098 aaPredicted RBP10.65□□□□□ -0.7
UBE2D3-227ENST00000508818 ZNF394Q53GI3 561 aa10.65□□□□□ -0.7
UBE2D3-227ENST00000508818 LY6G5CQ5SRR4 150 aa10.65□□□□□ -0.7
UBE2D3-227ENST00000508818 LCE2DQ5TA82 110 aaPredicted RBP10.65□□□□□ -0.7
UBE2D3-227ENST00000508818 C11orf74Q86VG3 221 aa10.65□□□□□ -0.7
UBE2D3-227ENST00000508818 SMYD4Q8IYR2 804 aaPredicted RBP10.65□□□□□ -0.7
UBE2D3-227ENST00000508818 NAT16Q8N8M0 369 aa10.65□□□□□ -0.7
UBE2D3-227ENST00000508818 FBXL13Q8NEE6 735 aa10.65□□□□□ -0.7
UBE2D3-227ENST00000508818 ZMIZ2Q8NF64 920 aa10.65□□□□□ -0.7
UBE2D3-227ENST00000508818 EZH1Q92800 747 aaPredicted RBP10.65□□□□□ -0.7
UBE2D3-227ENST00000508818 SMARCE1Q969G3 411 aa10.65□□□□□ -0.7
UBE2D3-227ENST00000508818 EEF2KMTQ96G04 330 aa10.65□□□□□ -0.7
UBE2D3-227ENST00000508818 GSDMAQ96QA5 445 aa10.65□□□□□ -0.7
UBE2D3-227ENST00000508818 TWNKQ96RR1 684 aa10.65□□□□□ -0.7
UBE2D3-227ENST00000508818 APOBEC3GQ9HC16 384 aaKnown RBP10.65□□□□□ -0.7
UBE2D3-227ENST00000508818 RAB20Q9NX57 234 aa10.65□□□□□ -0.7
UBE2D3-227ENST00000508818 DEC1Q9P2X7 70 aa10.65□□□□□ -0.7
UBE2D3-227ENST00000508818 SCML2Q9UQR0 700 aa10.65□□□□□ -0.7
UBE2D3-227ENST00000508818 PCDHA5Q9Y5H7 936 aa10.65□□□□□ -0.7
UBE2D3-227ENST00000508818 DMDP11532 3685 aa10.65□□□□□ -0.7
UBE2D3-227ENST00000508818 MED19A0JLT2 244 aaPredicted RBP10.64□□□□□ -0.71
UBE2D3-227ENST00000508818 FAM92AA1XBS5 289 aa10.64□□□□□ -0.71
UBE2D3-227ENST00000508818 CILPO75339 1184 aa10.64□□□□□ -0.71
UBE2D3-227ENST00000508818 EPN2O95208 641 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms