RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 Q6ZPA2 131 aa5.12□□□□□ -1.59
NUP54-206ENST00000508465 TMCO2Q7Z6W1 182 aaPredicted RBP5.12□□□□□ -1.59
NUP54-206ENST00000508465 PLA2G4DQ86XP0 818 aa5.12□□□□□ -1.59
NUP54-206ENST00000508465 RPUSD2Q8IZ73 545 aaKnown RBP5.12□□□□□ -1.59
NUP54-206ENST00000508465 FAM177A1Q8N128 213 aaPredicted RBP5.12□□□□□ -1.59
NUP54-206ENST00000508465 TRAPPC12Q8WVT3 735 aa5.12□□□□□ -1.59
NUP54-206ENST00000508465 SEPT1Q8WYJ6 367 aa5.12□□□□□ -1.59
NUP54-206ENST00000508465 ATP6V0A1Q93050 837 aa5.12□□□□□ -1.59
NUP54-206ENST00000508465 PCYT2Q99447 389 aa5.12□□□□□ -1.59
NUP54-206ENST00000508465 SENP7Q9BQF6 1050 aa5.12□□□□□ -1.59
NUP54-206ENST00000508465 RNF26Q9BY78 433 aaPredicted RBP5.12□□□□□ -1.59
NUP54-206ENST00000508465 ZMYND12Q9H0C1 365 aa5.12□□□□□ -1.59
NUP54-206ENST00000508465 NRDE2Q9H7Z3 1164 aa5.12□□□□□ -1.59
NUP54-206ENST00000508465 MTMR10Q9NXD2 777 aa5.12□□□□□ -1.59
NUP54-206ENST00000508465 ORC3Q9UBD5 711 aaPredicted RBP5.12□□□□□ -1.59
NUP54-206ENST00000508465 HECAQ9UBI9 543 aaPredicted RBP5.12□□□□□ -1.59
NUP54-206ENST00000508465 TRAF6Q9Y4K3 522 aa5.12□□□□□ -1.59
NUP54-206ENST00000508465 LRRC37A2A6NM11 1700 aa5.11□□□□□ -1.59
NUP54-206ENST00000508465 KIAA1217Q5T5P2 1943 aa5.11□□□□□ -1.59
NUP54-206ENST00000508465 IGLV3-22A0A075B6J6 115 aa5.11□□□□□ -1.59
NUP54-206ENST00000508465 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.11□□□□□ -1.59
NUP54-206ENST00000508465 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.11□□□□□ -1.59
NUP54-206ENST00000508465 C17orf102A2RUQ5 167 aa5.11□□□□□ -1.59
NUP54-206ENST00000508465 IPO5O00410 1097 aaKnown RBP5.11□□□□□ -1.59
NUP54-206ENST00000508465 NBNO60934 754 aa5.11□□□□□ -1.59
NUP54-206ENST00000508465 DEXIO95424 95 aa5.11□□□□□ -1.59
NUP54-206ENST00000508465 C4BPAP04003 597 aaKnown RBP5.11□□□□□ -1.59
NUP54-206ENST00000508465 AMY2AP04746 511 aa5.11□□□□□ -1.59
NUP54-206ENST00000508465 CYP3A4P08684 503 aa5.11□□□□□ -1.59
NUP54-206ENST00000508465 PYGMP11217 842 aa5.11□□□□□ -1.59
NUP54-206ENST00000508465 FDPSP14324 419 aaKnown RBP5.11□□□□□ -1.59
NUP54-206ENST00000508465 AMY2BP19961 511 aa5.11□□□□□ -1.59
NUP54-206ENST00000508465 GNA11P29992 359 aa5.11□□□□□ -1.59
NUP54-206ENST00000508465 MAN2A2P49641 1150 aa5.11□□□□□ -1.59
NUP54-206ENST00000508465 STAT5BP51692 787 aa5.11□□□□□ -1.59
NUP54-206ENST00000508465 ATXN1P54253 815 aaKnown RBP5.11□□□□□ -1.59
NUP54-206ENST00000508465 ANAPC15P60006 121 aa5.11□□□□□ -1.59
NUP54-206ENST00000508465 GUCY1B3Q02153 619 aa5.11□□□□□ -1.59
NUP54-206ENST00000508465 BFSP2Q13515 415 aa5.11□□□□□ -1.59
NUP54-206ENST00000508465 ANKRD1Q15327 319 aa5.11□□□□□ -1.59
NUP54-206ENST00000508465 NPY5RQ15761 445 aa5.11□□□□□ -1.59
NUP54-206ENST00000508465 CCDC142Q17RM4 750 aa5.11□□□□□ -1.59
NUP54-206ENST00000508465 TRIM71Q2Q1W2 868 aaKnown RBP5.11□□□□□ -1.59
NUP54-206ENST00000508465 SWSAP1Q6NVH7 229 aa5.11□□□□□ -1.59
NUP54-206ENST00000508465 CPLX2Q6PUV4 134 aaKnown RBP5.11□□□□□ -1.59
NUP54-206ENST00000508465 MAMDC2Q7Z304 686 aaPredicted RBP5.11□□□□□ -1.59
NUP54-206ENST00000508465 SERINC5Q86VE9 423 aa5.11□□□□□ -1.59
NUP54-206ENST00000508465 SESTD1Q86VW0 696 aa5.11□□□□□ -1.59
NUP54-206ENST00000508465 BLIDQ8IZY5 108 aa5.11□□□□□ -1.59
NUP54-206ENST00000508465 ST13P5Q8NFI4 369 aaPredicted RBP5.11□□□□□ -1.59
NUP54-206ENST00000508465 BICD2Q8TD16 824 aa5.11□□□□□ -1.59
NUP54-206ENST00000508465 TBCKQ8TEA7 893 aa5.11□□□□□ -1.59
NUP54-206ENST00000508465 CCDC12Q8WUD4 166 aaPredicted RBP5.11□□□□□ -1.59
NUP54-206ENST00000508465 CRYGNQ8WXF5 182 aa5.11□□□□□ -1.59
NUP54-206ENST00000508465 HERVK_113Q902F9 699 aa5.11□□□□□ -1.59
NUP54-206ENST00000508465 CDHR1Q96JP9 859 aa5.11□□□□□ -1.59
NUP54-206ENST00000508465 SDF4Q9BRK5 362 aa5.11□□□□□ -1.59
NUP54-206ENST00000508465 ZNF577Q9BSK1 485 aa5.11□□□□□ -1.59
NUP54-206ENST00000508465 KATNAL1Q9BW62 490 aa5.11□□□□□ -1.59
NUP54-206ENST00000508465 SEZ6LQ9BYH1 1024 aa5.11□□□□□ -1.59
NUP54-206ENST00000508465 C22orf23Q9BZE7 217 aa5.11□□□□□ -1.59
NUP54-206ENST00000508465 GLT8D2Q9H1C3 349 aa5.11□□□□□ -1.59
NUP54-206ENST00000508465 TTYH1Q9H313 450 aaPredicted RBP5.11□□□□□ -1.59
NUP54-206ENST00000508465 SMARCAD1Q9H4L7 1026 aa5.11□□□□□ -1.59
NUP54-206ENST00000508465 SH3GLB2Q9NR46 395 aa5.11□□□□□ -1.59
NUP54-206ENST00000508465 SLC9A2Q9UBY0 812 aa5.11□□□□□ -1.59
NUP54-206ENST00000508465 VWA7Q9Y334 891 aa5.11□□□□□ -1.59
NUP54-206ENST00000508465 DOCK5Q9H7D0 1870 aa5.11□□□□□ -1.59
NUP54-206ENST00000508465 ESYT2A0FGR8 921 aa5.1□□□□□ -1.59
NUP54-206ENST00000508465 RSPH10B2B2RC85 870 aa5.1□□□□□ -1.59
NUP54-206ENST00000508465 hCG_1984214I3L0E3 225 aa5.1□□□□□ -1.59
NUP54-206ENST00000508465 MSH4O15457 936 aa5.1□□□□□ -1.59
NUP54-206ENST00000508465 MAFGO15525 162 aa5.1□□□□□ -1.59
NUP54-206ENST00000508465 CHMP2AO43633 222 aa5.1□□□□□ -1.59
NUP54-206ENST00000508465 CDKL5O76039 1030 aa5.1□□□□□ -1.59
NUP54-206ENST00000508465 TDP2O95551 362 aa5.1□□□□□ -1.59
NUP54-206ENST00000508465 NUDT3O95989 172 aa5.1□□□□□ -1.59
NUP54-206ENST00000508465 CHRNA1P02708 482 aa5.1□□□□□ -1.59
NUP54-206ENST00000508465 RSPH10BP0C881 870 aa5.1□□□□□ -1.59
NUP54-206ENST00000508465 ATP2B1P20020 1258 aa5.1□□□□□ -1.59
NUP54-206ENST00000508465 ERCC5P28715 1186 aaPredicted RBP5.1□□□□□ -1.59
NUP54-206ENST00000508465 SCNN1GP51170 649 aa5.1□□□□□ -1.59
NUP54-206ENST00000508465 JAM2P57087 298 aa5.1□□□□□ -1.59
NUP54-206ENST00000508465 SESN2P58004 480 aaPredicted RBP5.1□□□□□ -1.59
NUP54-206ENST00000508465 SMAD3P84022 425 aaKnown RBP5.1□□□□□ -1.59
NUP54-206ENST00000508465 SLC25A3Q00325 362 aa5.1□□□□□ -1.59
NUP54-206ENST00000508465 COL10A1Q03692 680 aa5.1□□□□□ -1.59
NUP54-206ENST00000508465 ST3GAL1Q11201 340 aa5.1□□□□□ -1.59
NUP54-206ENST00000508465 PPFIA1Q13136 1202 aa5.1□□□□□ -1.59
NUP54-206ENST00000508465 NID2Q14112 1375 aa5.1□□□□□ -1.59
NUP54-206ENST00000508465 TRIP12Q14669 1992 aaPredicted RBP5.1□□□□□ -1.59
NUP54-206ENST00000508465 PLCB4Q15147 1175 aa5.1□□□□□ -1.59
NUP54-206ENST00000508465 SF3A1Q15459 793 aaKnown RBP5.1□□□□□ -1.59
NUP54-206ENST00000508465 CSRP2Q16527 193 aa5.1□□□□□ -1.59
NUP54-206ENST00000508465 EARS2Q5JPH6 523 aaKnown RBP5.1□□□□□ -1.59
NUP54-206ENST00000508465 MARCH8Q5T0T0 291 aa5.1□□□□□ -1.59
NUP54-206ENST00000508465 LRSAM1Q6UWE0 723 aa5.1□□□□□ -1.59
NUP54-206ENST00000508465 ABHD15Q6UXT9 468 aa5.1□□□□□ -1.59
NUP54-206ENST00000508465 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.1□□□□□ -1.594e-6■□□□□ 8.6
NUP54-206ENST00000508465 LRRC8DQ7L1W4 858 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms