RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 ZFPM1Q8IX07 1006 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 NAT8LQ8N9F0 302 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 ZNF784Q8NCA9 323 aaPredicted RBP5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 FBXO36Q8NEA4 188 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 CATSPER1Q8NEC5 780 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 RFWD2Q8NHY2 731 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 PPP1R14CQ8TAE6 165 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 MIPOL1Q8TD10 442 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 FNIP1Q8TF40 1166 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 MZB1Q8WU39 189 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 SLC44A1Q8WWI5 657 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 CPT1BQ92523 772 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 NCSTNQ92542 709 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 GFM2Q969S9 779 aaKnown RBP5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 TTC17Q96AE7 1141 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 E2F7Q96AV8 911 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 GPRASP2Q96D09 838 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 IFT43Q96FT9 208 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 MAML3Q96JK9 1138 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 CDHR1Q96JP9 859 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 FAM161BQ96MY7 647 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 MCEEQ96PE7 176 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 ECSITQ9BQ95 431 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 FAM213AQ9BRX8 229 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 HERPUD2Q9BSE4 406 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 GCOM2Q9BZD3 368 aaPredicted RBP5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 DHX33Q9H6R0 707 aaKnown RBP5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 RSAD1Q9HA92 442 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 ACP6Q9NPH0 428 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 TOPORSQ9NS56 1045 aaPredicted RBP5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 GINM1Q9NU53 330 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 ZDHHC7Q9NXF8 308 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 TAS2R1Q9NYW7 299 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 THEGQ9P2T0 379 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 AGO2Q9UKV8 859 aaKnown RBP5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 ZBTB21Q9ULJ3 1066 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 GRID1Q9ULK0 1009 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 TMCO1Q9UM00 188 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 SOX13Q9UN79 622 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 BCS1LQ9Y276 419 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 PPME1Q9Y570 386 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 PCDHA10Q9Y5I2 948 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 STYXL1Q9Y6J8 313 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 IVNS1ABPQ9Y6Y0 642 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 SLX4Q8IY92 1834 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 ASTN2O75129 1339 aaPredicted RBP5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 TAF1LQ8IZX4 1826 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 FAM170AA1A519 330 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 WDR91A4D1P6 747 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 TTLL8A6PVC2 850 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 SOBPA7XYQ1 873 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 PI4K2BG5E9Z4 385 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 POLRMTO00411 1230 aaKnown RBP5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 SPINT1O43278 529 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 PEX1O43933 1283 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 ZNF189O75820 626 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 PENKP01210 267 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 PIM1P11309 404 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 KRT10P13645 584 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 BGNP21810 368 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 KDELR1P24390 212 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 ACAT1P24752 427 aaKnown RBP5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 PSMA2P25787 234 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 PRDX6P30041 224 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 CCND2P30279 289 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 GSTT1P30711 240 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 SSTR1P30872 391 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 CDH5P33151 784 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 RPL22P35268 128 aaKnown RBP5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 CCNFP41002 786 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 ETV4P43268 484 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 ZNF132P52740 706 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 EIF3EP60228 445 aaKnown RBP5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 YWHAGP61981 247 aaKnown RBP eCLIP5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 TMPRSS15P98073 1019 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 RELBQ01201 579 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 ROR1Q01973 937 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 OVGP1Q12889 678 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 MED21Q13503 144 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 NAB1Q13506 487 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 FASTKD3Q14CZ7 662 aaKnown RBP5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 ADRM1Q16186 407 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 TAZQ16635 292 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 LIN52Q52LA3 116 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 PLEKHG4Q58EX7 1191 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 FSCBQ5H9T9 825 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 EFHC1Q5JVL4 640 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 DACT2Q5SW24 774 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 TDRD10Q5VZ19 366 aaKnown RBP5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 POTEAQ6S8J7 498 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 IZUMO2Q6UXV1 221 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 RINLQ6ZS11 566 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 RIPOR1Q6ZS17 1223 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 SMIM5Q71RC9 77 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 MARK2Q7KZI7 788 aaKnown RBP5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 PRUNE1Q86TP1 453 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 LCA5Q86VQ0 697 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 RASSF3Q86WH2 238 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 MYLK4Q86YV6 388 aaPredicted RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms