RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 MDH1BQ5I0G3 518 aa17.48■□□□□ 0.39
SNF8-205ENST00000507302 BRAPQ7Z569 592 aa17.48■□□□□ 0.39
SNF8-205ENST00000507302 PDZD3Q86UT5 571 aa17.48■□□□□ 0.39
SNF8-205ENST00000507302 WDR49Q8IV35 697 aa17.48■□□□□ 0.39
SNF8-205ENST00000507302 NUP93Q8N1F7 819 aa17.48■□□□□ 0.39
SNF8-205ENST00000507302 RASSF8Q8NHQ8 419 aa17.48■□□□□ 0.39
SNF8-205ENST00000507302 CAMK1GQ96NX5 476 aa17.48■□□□□ 0.39
SNF8-205ENST00000507302 SPHK2Q9NRA0 654 aa17.48■□□□□ 0.39
SNF8-205ENST00000507302 TBC1D7Q9P0N9 293 aa17.48■□□□□ 0.39
SNF8-205ENST00000507302 KIAA1522Q9P206 1035 aaPredicted RBP17.48■□□□□ 0.39
SNF8-205ENST00000507302 DKK4Q9UBT3 224 aa17.48■□□□□ 0.39
SNF8-205ENST00000507302 NFE2L3Q9Y4A8 694 aa17.48■□□□□ 0.39
SNF8-205ENST00000507302 DKK1O94907 266 aa17.47■□□□□ 0.39
SNF8-205ENST00000507302 RTN3O95197 1032 aaPredicted RBP17.47■□□□□ 0.39
SNF8-205ENST00000507302 STAU1O95793 577 aaKnown RBP17.47■□□□□ 0.39
SNF8-205ENST00000507302 FTH1P19P0C7X4 201 aa17.47■□□□□ 0.39
SNF8-205ENST00000507302 PTPN1P18031 435 aaKnown RBP17.47■□□□□ 0.39
SNF8-205ENST00000507302 NDUFV2P19404 249 aa17.47■□□□□ 0.39
SNF8-205ENST00000507302 YWHAQP27348 245 aa17.47■□□□□ 0.39
SNF8-205ENST00000507302 GNL1P36915 607 aaPredicted RBP17.47■□□□□ 0.39
SNF8-205ENST00000507302 SV2BQ7L1I2 683 aa17.47■□□□□ 0.39
SNF8-205ENST00000507302 TRAPPC11Q7Z392 1133 aa17.47■□□□□ 0.39
SNF8-205ENST00000507302 METTL3Q86U44 580 aaKnown RBP17.47■□□□□ 0.39
SNF8-205ENST00000507302 TMEM25Q86YD3 366 aa17.47■□□□□ 0.39
SNF8-205ENST00000507302 BBS7Q8IWZ6 715 aa17.47■□□□□ 0.39
SNF8-205ENST00000507302 DEFB119Q8N690 84 aa17.47■□□□□ 0.39
SNF8-205ENST00000507302 TRIML1Q8N9V2 468 aa17.47■□□□□ 0.39
SNF8-205ENST00000507302 WBP2Q969T9 261 aa17.47■□□□□ 0.39
SNF8-205ENST00000507302 TMX3Q96JJ7 454 aa17.47■□□□□ 0.39
SNF8-205ENST00000507302 B3GNT5Q9BYG0 378 aa17.47■□□□□ 0.39
SNF8-205ENST00000507302 ZNF518BQ9C0D4 1074 aa17.47■□□□□ 0.39
SNF8-205ENST00000507302 PCIF1Q9H4Z3 704 aa17.47■□□□□ 0.39
SNF8-205ENST00000507302 FAM124BQ9H5Z6 455 aaPredicted RBP17.47■□□□□ 0.39
SNF8-205ENST00000507302 ZNF233A6NK53 670 aa17.46■□□□□ 0.39
SNF8-205ENST00000507302 TRIM24O15164 1050 aa17.46■□□□□ 0.39
SNF8-205ENST00000507302 CACNG3O60359 315 aa17.46■□□□□ 0.39
SNF8-205ENST00000507302 CST3P01034 146 aaPredicted RBP17.46■□□□□ 0.39
SNF8-205ENST00000507302 TNNC2P02585 160 aa17.46■□□□□ 0.39
SNF8-205ENST00000507302 C10orf76Q5T2E6 689 aa17.46■□□□□ 0.39
SNF8-205ENST00000507302 HECTD3Q5T447 861 aa17.46■□□□□ 0.39
SNF8-205ENST00000507302 BTBD8Q5XKL5 378 aa17.46■□□□□ 0.39
SNF8-205ENST00000507302 EGFLAMQ63HQ2 1017 aa17.46■□□□□ 0.39
SNF8-205ENST00000507302 DBX2Q6ZNG2 339 aa17.46■□□□□ 0.39
SNF8-205ENST00000507302 NUDT18Q6ZVK8 323 aa17.46■□□□□ 0.39
SNF8-205ENST00000507302 HTR3DQ70Z44 454 aa17.46■□□□□ 0.39
SNF8-205ENST00000507302 CBWD2Q8IUF1 395 aa17.46■□□□□ 0.39
SNF8-205ENST00000507302 NAXDQ8IW45 347 aa17.46■□□□□ 0.39
SNF8-205ENST00000507302 SYCP3Q8IZU3 236 aa17.46■□□□□ 0.39
SNF8-205ENST00000507302 NAT16Q8N8M0 369 aa17.46■□□□□ 0.39
SNF8-205ENST00000507302 IPO4Q8TEX9 1081 aaKnown RBP17.46■□□□□ 0.39
SNF8-205ENST00000507302 DNASE2BQ8WZ79 361 aa17.46■□□□□ 0.39
SNF8-205ENST00000507302 HSPA12BQ96MM6 686 aa17.46■□□□□ 0.39
SNF8-205ENST00000507302 ACOX2Q99424 681 aa17.46■□□□□ 0.39
SNF8-205ENST00000507302 ZDHHC5Q9C0B5 715 aa17.46■□□□□ 0.39
SNF8-205ENST00000507302 SCUBE2Q9NQ36 999 aa17.46■□□□□ 0.39
SNF8-205ENST00000507302 COMMD8Q9NX08 183 aa17.46■□□□□ 0.39
SNF8-205ENST00000507302 MARK1Q9P0L2 795 aa17.46■□□□□ 0.39
SNF8-205ENST00000507302 SUSD2Q9UGT4 822 aa17.46■□□□□ 0.39
SNF8-205ENST00000507302 FBXO2Q9UK22 296 aaPredicted RBP17.46■□□□□ 0.39
SNF8-205ENST00000507302 GFRA2O00451 464 aa17.45■□□□□ 0.38
SNF8-205ENST00000507302 ABL1P00519 1130 aa17.45■□□□□ 0.38
SNF8-205ENST00000507302 ZNF883P0CG24 379 aa17.45■□□□□ 0.38
SNF8-205ENST00000507302 HOXD13P35453 343 aa17.45■□□□□ 0.38
SNF8-205ENST00000507302 COL28A1Q2UY09 1125 aa17.45■□□□□ 0.38
SNF8-205ENST00000507302 PAQR9Q6ZVX9 377 aa17.45■□□□□ 0.38
SNF8-205ENST00000507302 B3GALNT2Q8NCR0 500 aa17.45■□□□□ 0.38
SNF8-205ENST00000507302 BAHD1Q8TBE0 780 aaPredicted RBP17.45■□□□□ 0.38
SNF8-205ENST00000507302 MRGPRX1Q96LB2 322 aa17.45■□□□□ 0.38
SNF8-205ENST00000507302 MMS19Q96T76 1030 aa17.45■□□□□ 0.38
SNF8-205ENST00000507302 DPEP3Q9H4B8 488 aa17.45■□□□□ 0.38
SNF8-205ENST00000507302 KIAA1586Q9HCI6 787 aa17.45■□□□□ 0.38
SNF8-205ENST00000507302 CCDC39Q9UFE4 941 aa17.45■□□□□ 0.38
SNF8-205ENST00000507302 SRPRBQ9Y5M8 271 aaKnown RBP17.45■□□□□ 0.38
SNF8-205ENST00000507302 MORC2Q9Y6X9 1032 aaPredicted RBP17.45■□□□□ 0.38
SNF8-205ENST00000507302 ASH1LQ9NR48 2969 aaKnown RBP17.45■□□□□ 0.38
SNF8-205ENST00000507302 PRPF6O94906 941 aaKnown RBP17.44■□□□□ 0.38
SNF8-205ENST00000507302 RRAGBQ5VZM2 374 aa17.44■□□□□ 0.38
SNF8-205ENST00000507302 C19orf48Q6RUI8 117 aa17.44■□□□□ 0.38
SNF8-205ENST00000507302 TOGARAM2Q6ZUX3 1019 aa17.44■□□□□ 0.38
SNF8-205ENST00000507302 HS2ST1Q7LGA3 356 aa17.44■□□□□ 0.38
SNF8-205ENST00000507302 SLCO6A1Q86UG4 719 aa17.44■□□□□ 0.38
SNF8-205ENST00000507302 FOXJ1Q92949 421 aa17.44■□□□□ 0.38
SNF8-205ENST00000507302 FBXO32Q969P5 355 aa17.44■□□□□ 0.38
SNF8-205ENST00000507302 GZF1Q9H116 711 aaPredicted RBP17.44■□□□□ 0.38
SNF8-205ENST00000507302 XYLT2Q9H1B5 865 aa17.44■□□□□ 0.38
SNF8-205ENST00000507302 SNX25Q9H3E2 840 aa17.44■□□□□ 0.38
SNF8-205ENST00000507302 CCDC86Q9H6F5 360 aaKnown RBP17.44■□□□□ 0.38
SNF8-205ENST00000507302 CCSER2Q9H7U1 834 aa17.44■□□□□ 0.38
SNF8-205ENST00000507302 CD93Q9NPY3 652 aa17.44■□□□□ 0.38
SNF8-205ENST00000507302 PCOLCE2Q9UKZ9 415 aa17.44■□□□□ 0.38
SNF8-205ENST00000507302 CYP8B1Q9UNU6 501 aa17.44■□□□□ 0.38
SNF8-205ENST00000507302 R3HCC1Q9Y3T6 440 aaKnown RBP17.44■□□□□ 0.38
SNF8-205ENST00000507302 MYH10P35580 1976 aa17.43■□□□□ 0.38
SNF8-205ENST00000507302 PRRT4C9JH25 899 aa17.43■□□□□ 0.38
SNF8-205ENST00000507302 CLDN5O00501 218 aa17.43■□□□□ 0.38
SNF8-205ENST00000507302 CISD3P0C7P0 127 aa17.43■□□□□ 0.38
SNF8-205ENST00000507302 GRIK2Q13002 908 aa17.43■□□□□ 0.38
SNF8-205ENST00000507302 ENPP2Q13822 863 aa17.43■□□□□ 0.38
SNF8-205ENST00000507302 RABEP1Q15276 862 aa17.43■□□□□ 0.38
SNF8-205ENST00000507302 PLEKHG6Q3KR16 790 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms