RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 TMEM130Q8N3G9 435 aa8.89□□□□□ -0.99
PDGFC-205ENST00000506880 CCDC26Q8TAB7 109 aa8.89□□□□□ -0.99
PDGFC-205ENST00000506880 SHKBP1Q8TBC3 707 aa8.89□□□□□ -0.99
PDGFC-205ENST00000506880 TFAP2BQ92481 460 aa8.89□□□□□ -0.99
PDGFC-205ENST00000506880 KAT5Q92993 513 aa8.89□□□□□ -0.99
PDGFC-205ENST00000506880 C18orf8Q96DM3 657 aa8.89□□□□□ -0.99
PDGFC-205ENST00000506880 PGAP3Q96FM1 320 aaPredicted RBP8.89□□□□□ -0.99
PDGFC-205ENST00000506880 PPP1R13BQ96KQ4 1090 aa8.89□□□□□ -0.99
PDGFC-205ENST00000506880 PANX2Q96RD6 677 aa8.89□□□□□ -0.99
PDGFC-205ENST00000506880 SYT11Q9BT88 431 aa8.89□□□□□ -0.99
PDGFC-205ENST00000506880 ATXN3LQ9H3M9 355 aa8.89□□□□□ -0.99
PDGFC-205ENST00000506880 NLRC4Q9NPP4 1024 aa8.89□□□□□ -0.99
PDGFC-205ENST00000506880 SLC2A4RGQ9NR83 387 aa8.89□□□□□ -0.99
PDGFC-205ENST00000506880 TDP1Q9NUW8 608 aa8.89□□□□□ -0.99
PDGFC-205ENST00000506880 DNMT3LQ9UJW3 386 aa8.89□□□□□ -0.99
PDGFC-205ENST00000506880 INTUQ9ULD6 942 aa8.89□□□□□ -0.99
PDGFC-205ENST00000506880 HBS1LQ9Y450 684 aaKnown RBP8.89□□□□□ -0.99
PDGFC-205ENST00000506880 LRRC53A6NM62 1247 aa8.88□□□□□ -0.99
PDGFC-205ENST00000506880 EIF3CLB5ME19 914 aaKnown RBP8.88□□□□□ -0.99
PDGFC-205ENST00000506880 AKR1B15C9JRZ8 316 aaPredicted RBP8.88□□□□□ -0.99
PDGFC-205ENST00000506880 CLDN5O00501 218 aa8.88□□□□□ -0.99
PDGFC-205ENST00000506880 CHADO15335 359 aa8.88□□□□□ -0.99
PDGFC-205ENST00000506880 UNGP13051 313 aaPredicted RBP8.88□□□□□ -0.99
PDGFC-205ENST00000506880 ALADP13716 330 aa8.88□□□□□ -0.99
PDGFC-205ENST00000506880 FECHP22830 423 aa8.88□□□□□ -0.99
PDGFC-205ENST00000506880 MMP8P22894 467 aa8.88□□□□□ -0.99
PDGFC-205ENST00000506880 NSFP46459 744 aaKnown RBP8.88□□□□□ -0.99
PDGFC-205ENST00000506880 TKTL1P51854 596 aa8.88□□□□□ -0.99
PDGFC-205ENST00000506880 AIF1P55008 147 aa8.88□□□□□ -0.99
PDGFC-205ENST00000506880 DAOAP59103 153 aa8.88□□□□□ -0.99
PDGFC-205ENST00000506880 NOMO3P69849 1222 aa8.88□□□□□ -0.99
PDGFC-205ENST00000506880 FMO1Q01740 532 aa8.88□□□□□ -0.99
PDGFC-205ENST00000506880 FCHO2Q0JRZ9 810 aa8.88□□□□□ -0.99
PDGFC-205ENST00000506880 TBX2Q13207 712 aaPredicted RBP8.88□□□□□ -0.99
PDGFC-205ENST00000506880 ACAP1Q15027 740 aa8.88□□□□□ -0.99
PDGFC-205ENST00000506880 PDGFRLQ15198 375 aa8.88□□□□□ -0.99
PDGFC-205ENST00000506880 GJB7Q6PEY0 223 aa8.88□□□□□ -0.99
PDGFC-205ENST00000506880 TMEM150AQ86TG1 271 aa8.88□□□□□ -0.99
PDGFC-205ENST00000506880 ERICH1Q86X53 443 aa8.88□□□□□ -0.99
PDGFC-205ENST00000506880 UNC45BQ8IWX7 931 aa8.88□□□□□ -0.99
PDGFC-205ENST00000506880 SUGP1Q8IWZ8 645 aaKnown RBP8.88□□□□□ -0.99
PDGFC-205ENST00000506880 TTC9BQ8N6N2 239 aa8.88□□□□□ -0.99
PDGFC-205ENST00000506880 RNF214Q8ND24 703 aa8.88□□□□□ -0.99
PDGFC-205ENST00000506880 FNIP1Q8TF40 1166 aa8.88□□□□□ -0.99
PDGFC-205ENST00000506880 PPM1EQ8WY54 764 aa8.88□□□□□ -0.99
PDGFC-205ENST00000506880 IRF7Q92985 503 aa8.88□□□□□ -0.99
PDGFC-205ENST00000506880 SECISBP2LQ93073 1101 aaKnown RBP8.88□□□□□ -0.99
PDGFC-205ENST00000506880 PLD4Q96BZ4 506 aa8.88□□□□□ -0.99
PDGFC-205ENST00000506880 SERPINB11Q96P15 392 aa8.88□□□□□ -0.99
PDGFC-205ENST00000506880 KCNK16Q96T55 309 aa8.88□□□□□ -0.99
PDGFC-205ENST00000506880 EIF3CQ99613 913 aaKnown RBP8.88□□□□□ -0.99
PDGFC-205ENST00000506880 AGPAT1Q99943 283 aa8.88□□□□□ -0.99
PDGFC-205ENST00000506880 DDX50Q9BQ39 737 aaKnown RBP8.88□□□□□ -0.99
PDGFC-205ENST00000506880 LPIN3Q9BQK8 851 aa8.88□□□□□ -0.99
PDGFC-205ENST00000506880 IER2Q9BTL4 223 aa8.88□□□□□ -0.99
PDGFC-205ENST00000506880 RBSNQ9H1K0 784 aa8.88□□□□□ -0.99
PDGFC-205ENST00000506880 POPDC2Q9HBU9 364 aa8.88□□□□□ -0.99
PDGFC-205ENST00000506880 MRPL47Q9HD33 250 aaKnown RBP8.88□□□□□ -0.99
PDGFC-205ENST00000506880 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.88□□□□□ -0.99
PDGFC-205ENST00000506880 SORCS3Q9UPU3 1222 aa8.88□□□□□ -0.99
PDGFC-205ENST00000506880 SCINQ9Y6U3 715 aa8.88□□□□□ -0.99
PDGFC-205ENST00000506880 SPTBN5Q9NRC6 3674 aaKnown RBP8.88□□□□□ -0.99
PDGFC-205ENST00000506880 UNC80Q8N2C7 3258 aa8.88□□□□□ -0.99
PDGFC-205ENST00000506880 TCF20Q9UGU0 1960 aaKnown RBP8.87□□□□□ -0.99
PDGFC-205ENST00000506880 A0A1W2PRU2 124 aa8.87□□□□□ -0.99
PDGFC-205ENST00000506880 ANKRD62A6NC57 917 aa8.87□□□□□ -0.99
PDGFC-205ENST00000506880 DPYSL4O14531 572 aa8.87□□□□□ -0.99
PDGFC-205ENST00000506880 EPHB6O15197 1021 aa8.87□□□□□ -0.99
PDGFC-205ENST00000506880 HCRTO43612 131 aa8.87□□□□□ -0.99
PDGFC-205ENST00000506880 TLR5O60602 858 aa8.87□□□□□ -0.99
PDGFC-205ENST00000506880 MFAP3LO75121 409 aa8.87□□□□□ -0.99
PDGFC-205ENST00000506880 RTN2O75298 545 aa8.87□□□□□ -0.99
PDGFC-205ENST00000506880 MOSPD3O75425 235 aa8.87□□□□□ -0.99
PDGFC-205ENST00000506880 LTFP02788 710 aa8.87□□□□□ -0.99
PDGFC-205ENST00000506880 MYL4P12829 197 aa8.87□□□□□ -0.99
PDGFC-205ENST00000506880 PSMC3P17980 439 aa8.87□□□□□ -0.99
PDGFC-205ENST00000506880 HDCP19113 662 aa8.87□□□□□ -0.99
PDGFC-205ENST00000506880 TNFAIP3P21580 790 aa8.87□□□□□ -0.99
PDGFC-205ENST00000506880 GBP1P32455 592 aa8.87□□□□□ -0.99
PDGFC-205ENST00000506880 GBP2P32456 591 aaPredicted RBP8.87□□□□□ -0.99
PDGFC-205ENST00000506880 MAGEA9P43362 315 aa8.87□□□□□ -0.99
PDGFC-205ENST00000506880 MRE11P49959 708 aa8.87□□□□□ -0.99
PDGFC-205ENST00000506880 ZNF75DP51815 510 aa8.87□□□□□ -0.99
PDGFC-205ENST00000506880 ZNF135P52742 658 aaPredicted RBP8.87□□□□□ -0.99
PDGFC-205ENST00000506880 YWHAGP61981 247 aaKnown RBP eCLIP8.87□□□□□ -0.99
PDGFC-205ENST00000506880 YWHAZP63104 245 aaKnown RBP8.87□□□□□ -0.99
PDGFC-205ENST00000506880 ADIGQ0VDE8 80 aa8.87□□□□□ -0.99
PDGFC-205ENST00000506880 USP4Q13107 963 aa8.87□□□□□ -0.99
PDGFC-205ENST00000506880 NR1H3Q13133 447 aa8.87□□□□□ -0.99
PDGFC-205ENST00000506880 TDGQ13569 410 aa8.87□□□□□ -0.99
PDGFC-205ENST00000506880 MTMR3Q13615 1198 aa8.87□□□□□ -0.99
PDGFC-205ENST00000506880 HTR4Q13639 388 aa8.87□□□□□ -0.99
PDGFC-205ENST00000506880 CLEC16AQ2KHT3 1053 aa8.87□□□□□ -0.99
PDGFC-205ENST00000506880 GPR158Q5T848 1215 aa8.87□□□□□ -0.99
PDGFC-205ENST00000506880 BTBD8Q5XKL5 378 aa8.87□□□□□ -0.99
PDGFC-205ENST00000506880 NUGGCQ68CJ6 796 aa8.87□□□□□ -0.99
PDGFC-205ENST00000506880 PMF1Q6P1K2 205 aa8.87□□□□□ -0.99
PDGFC-205ENST00000506880 NOP9Q86U38 636 aaKnown RBP8.87□□□□□ -0.99
PDGFC-205ENST00000506880 GJD3Q8N144 294 aa8.87□□□□□ -0.99
PDGFC-205ENST00000506880 C12orf76Q8N812 135 aaPredicted RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms