RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 ACO1P21399 889 aaKnown RBP13.84□□□□□ -0.19
TCOF1-209ENST00000506630 WEE1P30291 646 aa13.84□□□□□ -0.19
TCOF1-209ENST00000506630 PPP3CCP48454 512 aa13.84□□□□□ -0.19
TCOF1-209ENST00000506630 CCR3P51677 355 aa13.84□□□□□ -0.19
TCOF1-209ENST00000506630 MYL5Q02045 173 aa13.84□□□□□ -0.19
TCOF1-209ENST00000506630 KLHL40Q2TBA0 621 aa13.84□□□□□ -0.19
TCOF1-209ENST00000506630 PPM1JQ5JR12 505 aa13.84□□□□□ -0.19
TCOF1-209ENST00000506630 MIIPQ5JXC2 388 aa13.84□□□□□ -0.19
TCOF1-209ENST00000506630 PRR23BQ6ZRT6 265 aa13.84□□□□□ -0.19
TCOF1-209ENST00000506630 GPRIN1Q7Z2K8 1008 aa13.84□□□□□ -0.19
TCOF1-209ENST00000506630 ARL14EPQ8N8R7 260 aaPredicted RBP13.84□□□□□ -0.19
TCOF1-209ENST00000506630 RBBP8NLQ8NC74 664 aaPredicted RBP13.84□□□□□ -0.19
TCOF1-209ENST00000506630 TTC16Q8NEE8 873 aa13.84□□□□□ -0.19
TCOF1-209ENST00000506630 PDZD8Q8NEN9 1154 aa13.84□□□□□ -0.19
TCOF1-209ENST00000506630 BPIFB1Q8TDL5 484 aa13.84□□□□□ -0.19
TCOF1-209ENST00000506630 USP13Q92995 863 aaPredicted RBP13.84□□□□□ -0.19
TCOF1-209ENST00000506630 KREMEN1Q96MU8 473 aa13.84□□□□□ -0.19
TCOF1-209ENST00000506630 SLC22A12Q96S37 553 aa13.84□□□□□ -0.19
TCOF1-209ENST00000506630 DUSP16Q9BY84 665 aa13.84□□□□□ -0.19
TCOF1-209ENST00000506630 NDST4Q9H3R1 872 aa13.84□□□□□ -0.19
TCOF1-209ENST00000506630 FBXO44Q9H4M3 255 aa13.84□□□□□ -0.19
TCOF1-209ENST00000506630 KIF9Q9HAQ2 790 aa13.84□□□□□ -0.19
TCOF1-209ENST00000506630 UBE2TQ9NPD8 197 aaPredicted RBP13.84□□□□□ -0.19
TCOF1-209ENST00000506630 TDP1Q9NUW8 608 aa13.84□□□□□ -0.19
TCOF1-209ENST00000506630 OBP2AQ9NY56 170 aa13.84□□□□□ -0.19
TCOF1-209ENST00000506630 TAB2Q9NYJ8 693 aa13.84□□□□□ -0.19
TCOF1-209ENST00000506630 GMIPQ9P107 970 aa13.84□□□□□ -0.19
TCOF1-209ENST00000506630 HESX1Q9UBX0 185 aa13.84□□□□□ -0.19
TCOF1-209ENST00000506630 TSPAN16Q9UKR8 245 aa13.84□□□□□ -0.19
TCOF1-209ENST00000506630 CCL26Q9Y258 94 aa13.84□□□□□ -0.19
TCOF1-209ENST00000506630 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.84□□□□□ -0.19
TCOF1-209ENST00000506630 F5P12259 2224 aa13.84□□□□□ -0.19
TCOF1-209ENST00000506630 FRYLO94915 3013 aa13.84□□□□□ -0.19
TCOF1-209ENST00000506630 ATG2BQ96BY7 2078 aa13.83□□□□□ -0.2
TCOF1-209ENST00000506630 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.83□□□□□ -0.2
TCOF1-209ENST00000506630 ZNF840PA6NDX5 716 aa13.83□□□□□ -0.2
TCOF1-209ENST00000506630 FOXD2O60548 495 aaPredicted RBP13.83□□□□□ -0.2
TCOF1-209ENST00000506630 TPM2P07951 284 aa13.83□□□□□ -0.2
TCOF1-209ENST00000506630 PAEPP09466 180 aa13.83□□□□□ -0.2
TCOF1-209ENST00000506630 VDRP11473 427 aa13.83□□□□□ -0.2
TCOF1-209ENST00000506630 KRT5P13647 590 aa13.83□□□□□ -0.2
TCOF1-209ENST00000506630 PDE6CP51160 858 aa13.83□□□□□ -0.2
TCOF1-209ENST00000506630 BCAT1P54687 386 aa13.83□□□□□ -0.2
TCOF1-209ENST00000506630 MFAP3P55082 362 aa13.83□□□□□ -0.2
TCOF1-209ENST00000506630 SLC8A3P57103 927 aa13.83□□□□□ -0.2
TCOF1-209ENST00000506630 APBA1Q02410 837 aa13.83□□□□□ -0.2
TCOF1-209ENST00000506630 ANO6Q4KMQ2 910 aa13.83□□□□□ -0.2
TCOF1-209ENST00000506630 CDKAL1Q5VV42 579 aa13.83□□□□□ -0.2
TCOF1-209ENST00000506630 GJB7Q6PEY0 223 aa13.83□□□□□ -0.2
TCOF1-209ENST00000506630 TTC30AQ86WT1 665 aa13.83□□□□□ -0.2
TCOF1-209ENST00000506630 OVCA2Q8WZ82 227 aa13.83□□□□□ -0.2
TCOF1-209ENST00000506630 FAM3CQ92520 227 aa13.83□□□□□ -0.2
TCOF1-209ENST00000506630 FAM81BQ96LP2 452 aa13.83□□□□□ -0.2
TCOF1-209ENST00000506630 CYP2S1Q96SQ9 504 aa13.83□□□□□ -0.2
TCOF1-209ENST00000506630 LMAN1LQ9HAT1 526 aa13.83□□□□□ -0.2
TCOF1-209ENST00000506630 PNPLA8Q9NP80 782 aa13.83□□□□□ -0.2
TCOF1-209ENST00000506630 FANCLQ9NW38 375 aa13.83□□□□□ -0.2
TCOF1-209ENST00000506630 COMMD8Q9NX08 183 aa13.83□□□□□ -0.2
TCOF1-209ENST00000506630 APEX2Q9UBZ4 518 aa13.83□□□□□ -0.2
TCOF1-209ENST00000506630 KMT2BQ9UMN6 2715 aaPredicted RBP13.83□□□□□ -0.2
TCOF1-209ENST00000506630 HHLA1C9JL84 531 aa13.82□□□□□ -0.2
TCOF1-209ENST00000506630 RNF225M0QZC1 329 aaPredicted RBP13.82□□□□□ -0.2
TCOF1-209ENST00000506630 CHADO15335 359 aa13.82□□□□□ -0.2
TCOF1-209ENST00000506630 CALCAP01258 141 aa13.82□□□□□ -0.2
TCOF1-209ENST00000506630 TDGF1P13385 188 aa13.82□□□□□ -0.2
TCOF1-209ENST00000506630 HDCP19113 662 aa13.82□□□□□ -0.2
TCOF1-209ENST00000506630 BRD2P25440 801 aaKnown RBP13.82□□□□□ -0.2
TCOF1-209ENST00000506630 PON1P27169 355 aa13.82□□□□□ -0.2
TCOF1-209ENST00000506630 CXCL12P48061 93 aa13.82□□□□□ -0.2
TCOF1-209ENST00000506630 FCHO2Q0JRZ9 810 aa13.82□□□□□ -0.2
TCOF1-209ENST00000506630 BST2Q10589 180 aaKnown RBP13.82□□□□□ -0.2
TCOF1-209ENST00000506630 SIM2Q14190 667 aaPredicted RBP13.82□□□□□ -0.2
TCOF1-209ENST00000506630 ZNF268Q14587 947 aaPredicted RBP13.82□□□□□ -0.2
TCOF1-209ENST00000506630 KRT31Q15323 416 aa13.82□□□□□ -0.2
TCOF1-209ENST00000506630 ARHGAP44Q17R89 818 aa13.82□□□□□ -0.2
TCOF1-209ENST00000506630 ARHGAP29Q52LW3 1261 aa13.82□□□□□ -0.2
TCOF1-209ENST00000506630 ENOSF1Q7L5Y1 443 aa13.82□□□□□ -0.2
TCOF1-209ENST00000506630 AOPEPQ8N6M6 819 aa13.82□□□□□ -0.2
TCOF1-209ENST00000506630 ANKRD52Q8NB46 1076 aa13.82□□□□□ -0.2
TCOF1-209ENST00000506630 ANKRD20A12PQ8NF67 263 aa13.82□□□□□ -0.2
TCOF1-209ENST00000506630 DDX1Q92499 740 aaKnown RBP13.82□□□□□ -0.2
TCOF1-209ENST00000506630 ZFYVE19Q96K21 471 aa13.82□□□□□ -0.2
TCOF1-209ENST00000506630 NAT10Q9H0A0 1025 aaKnown RBP13.82□□□□□ -0.2
TCOF1-209ENST00000506630 VPS16Q9H269 839 aa13.82□□□□□ -0.2
TCOF1-209ENST00000506630 TRPV5Q9NQA5 729 aa13.82□□□□□ -0.2
TCOF1-209ENST00000506630 SEMA4GQ9NTN9 838 aa13.82□□□□□ -0.2
TCOF1-209ENST00000506630 THG1LQ9NWX6 298 aaKnown RBP13.82□□□□□ -0.2
TCOF1-209ENST00000506630 IL37Q9NZH6 218 aa13.82□□□□□ -0.2
TCOF1-209ENST00000506630 CHORDC1Q9UHD1 332 aaPredicted RBP13.82□□□□□ -0.2
TCOF1-209ENST00000506630 KIAA1257Q9ULG3 409 aa13.82□□□□□ -0.2
TCOF1-209ENST00000506630 PIAS3Q9Y6X2 628 aa13.82□□□□□ -0.2
TCOF1-209ENST00000506630 SYCE3A1L190 88 aa13.81□□□□□ -0.2
TCOF1-209ENST00000506630 FAM92AA1XBS5 289 aa13.81□□□□□ -0.2
TCOF1-209ENST00000506630 M0QYV0 167 aa13.81□□□□□ -0.2
TCOF1-209ENST00000506630 O00370 1275 aa13.81□□□□□ -0.2
TCOF1-209ENST00000506630 CYP26A1O43174 497 aa13.81□□□□□ -0.2
TCOF1-209ENST00000506630 OAS1P00973 400 aaKnown RBP13.81□□□□□ -0.2
TCOF1-209ENST00000506630 MBL2P11226 248 aaPredicted RBP13.81□□□□□ -0.2
TCOF1-209ENST00000506630 PFKLP17858 780 aa13.81□□□□□ -0.2
TCOF1-209ENST00000506630 HOXC13P31276 330 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms