RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 CCINQ13939 588 aa16.37■□□□□ 0.21
MED28-204ENST00000506409 CCDC186Q7Z3E2 898 aa16.37■□□□□ 0.21
MED28-204ENST00000506409 FAM114A1Q8IWE2 563 aa16.37■□□□□ 0.21
MED28-204ENST00000506409 EXOC4Q96A65 974 aa16.37■□□□□ 0.21
MED28-204ENST00000506409 ZFRQ96KR1 1074 aaKnown RBP16.37■□□□□ 0.21
MED28-204ENST00000506409 CRACR2AQ9BSW2 395 aa16.37■□□□□ 0.21
MED28-204ENST00000506409 NMUR1Q9HB89 426 aa16.37■□□□□ 0.21
MED28-204ENST00000506409 CYLDQ9NQC7 956 aa16.37■□□□□ 0.21
MED28-204ENST00000506409 OSER1Q9NX31 292 aa16.37■□□□□ 0.21
MED28-204ENST00000506409 NAGPAQ9UK23 515 aa16.37■□□□□ 0.21
MED28-204ENST00000506409 SH3BP1Q9Y3L3 701 aa16.37■□□□□ 0.21
MED28-204ENST00000506409 USP3Q9Y6I4 520 aa16.37■□□□□ 0.21
MED28-204ENST00000506409 E2F8A0AVK6 867 aa16.36■□□□□ 0.21
MED28-204ENST00000506409 TRDMT1O14717 391 aaKnown RBP16.36■□□□□ 0.21
MED28-204ENST00000506409 XPO1O14980 1071 aaKnown RBP16.36■□□□□ 0.21
MED28-204ENST00000506409 TBX18O95935 607 aa16.36■□□□□ 0.21
MED28-204ENST00000506409 ATP5C1P36542 298 aaKnown RBP16.36■□□□□ 0.21
MED28-204ENST00000506409 PSEN1P49768 467 aa16.36■□□□□ 0.21
MED28-204ENST00000506409 CSTF1Q05048 431 aaKnown RBP16.36■□□□□ 0.21
MED28-204ENST00000506409 PDE4CQ08493 712 aa16.36■□□□□ 0.21
MED28-204ENST00000506409 BST2Q10589 180 aaKnown RBP16.36■□□□□ 0.21
MED28-204ENST00000506409 TMEM196Q5HYL7 178 aa16.36■□□□□ 0.21
MED28-204ENST00000506409 MAMSTRQ6ZN01 415 aa16.36■□□□□ 0.21
MED28-204ENST00000506409 Q6ZS52 159 aa16.36■□□□□ 0.21
MED28-204ENST00000506409 RBBP8NLQ8NC74 664 aaPredicted RBP16.36■□□□□ 0.21
MED28-204ENST00000506409 KREMEN1Q96MU8 473 aa16.36■□□□□ 0.21
MED28-204ENST00000506409 P2RY13Q9BPV8 354 aa16.36■□□□□ 0.21
MED28-204ENST00000506409 PRMT8Q9NR22 394 aaPredicted RBP16.36■□□□□ 0.21
MED28-204ENST00000506409 TBC1D14Q9P2M4 693 aa16.36■□□□□ 0.21
MED28-204ENST00000506409 PROB1E7EW31 1015 aa16.35■□□□□ 0.21
MED28-204ENST00000506409 RNF225M0QZC1 329 aaPredicted RBP16.35■□□□□ 0.21
MED28-204ENST00000506409 TULP2O00295 520 aa16.35■□□□□ 0.21
MED28-204ENST00000506409 CYP17A1P05093 508 aa16.35■□□□□ 0.21
MED28-204ENST00000506409 SETSIPP0DME0 302 aa16.35■□□□□ 0.21
MED28-204ENST00000506409 IRF1P10914 325 aa16.35■□□□□ 0.21
MED28-204ENST00000506409 RARGP13631 454 aa16.35■□□□□ 0.21
MED28-204ENST00000506409 KRT5P13647 590 aa16.35■□□□□ 0.21
MED28-204ENST00000506409 GALK1P51570 392 aa16.35■□□□□ 0.21
MED28-204ENST00000506409 CCR3P51677 355 aa16.35■□□□□ 0.21
MED28-204ENST00000506409 TKTL1P51854 596 aa16.35■□□□□ 0.21
MED28-204ENST00000506409 GAS6Q14393 721 aa16.35■□□□□ 0.21
MED28-204ENST00000506409 PPP2R5DQ14738 602 aa16.35■□□□□ 0.21
MED28-204ENST00000506409 ZNF528Q3MIS6 628 aa16.35■□□□□ 0.21
MED28-204ENST00000506409 CT47A1Q5JQC4 288 aaPredicted RBP16.35■□□□□ 0.21
MED28-204ENST00000506409 RAB41Q5JT25 222 aa16.35■□□□□ 0.21
MED28-204ENST00000506409 C10orf120Q5SQS8 335 aa16.35■□□□□ 0.21
MED28-204ENST00000506409 FSTL4Q6MZW2 842 aa16.35■□□□□ 0.21
MED28-204ENST00000506409 KLHDC10Q6PID8 442 aa16.35■□□□□ 0.21
MED28-204ENST00000506409 TRIM65Q6PJ69 517 aa16.35■□□□□ 0.21
MED28-204ENST00000506409 ZC3H14Q6PJT7 736 aaKnown RBP16.35■□□□□ 0.21
MED28-204ENST00000506409 LCLAT1Q6UWP7 414 aa16.35■□□□□ 0.21
MED28-204ENST00000506409 GBP6Q6ZN66 633 aa16.35■□□□□ 0.21
MED28-204ENST00000506409 SCD5Q86SK9 330 aa16.35■□□□□ 0.21
MED28-204ENST00000506409 TADA2BQ86TJ2 420 aa16.35■□□□□ 0.21
MED28-204ENST00000506409 ADGRG2Q8IZP9 1017 aa16.35■□□□□ 0.21
MED28-204ENST00000506409 SYNPOQ8N3V7 929 aa16.35■□□□□ 0.21
MED28-204ENST00000506409 SPEM1Q8N4L4 309 aa16.35■□□□□ 0.21
MED28-204ENST00000506409 UBA3Q8TBC4 463 aa16.35■□□□□ 0.21
MED28-204ENST00000506409 TFAP2BQ92481 460 aa16.35■□□□□ 0.21
MED28-204ENST00000506409 LRRC4Q9HBW1 653 aa16.35■□□□□ 0.21
MED28-204ENST00000506409 UBE2TQ9NPD8 197 aaPredicted RBP16.35■□□□□ 0.21
MED28-204ENST00000506409 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.35■□□□□ 0.21
MED28-204ENST00000506409 CLIC5Q9NZA1 410 aa16.35■□□□□ 0.21
MED28-204ENST00000506409 R4GN57 208 aa16.35■□□□□ 0.21
MED28-204ENST00000506409 RALAP11233 206 aa16.34■□□□□ 0.21
MED28-204ENST00000506409 DRD1P21728 446 aa16.34■□□□□ 0.21
MED28-204ENST00000506409 BRD2P25440 801 aaKnown RBP16.34■□□□□ 0.21
MED28-204ENST00000506409 PLA2G4AP47712 749 aa16.34■□□□□ 0.21
MED28-204ENST00000506409 ZNF132P52740 706 aa16.34■□□□□ 0.21
MED28-204ENST00000506409 GOLGA8FQ08AF8 430 aa16.34■□□□□ 0.21
MED28-204ENST00000506409 GOLGA8DPQ0D2H9 430 aa16.34■□□□□ 0.21
MED28-204ENST00000506409 DHCR24Q15392 516 aa16.34■□□□□ 0.21
MED28-204ENST00000506409 STILQ15468 1287 aa16.34■□□□□ 0.21
MED28-204ENST00000506409 MAN2A1Q16706 1144 aa16.34■□□□□ 0.21
MED28-204ENST00000506409 EXOC3L4Q17RC7 722 aa16.34■□□□□ 0.21
MED28-204ENST00000506409 HSP90AA4PQ58FG1 418 aa16.34■□□□□ 0.21
MED28-204ENST00000506409 NAIF1Q69YI7 327 aaPredicted RBP16.34■□□□□ 0.21
MED28-204ENST00000506409 TSSK4Q6SA08 328 aa16.34■□□□□ 0.21
MED28-204ENST00000506409 RBM43Q6ZSC3 357 aaKnown RBP16.34■□□□□ 0.21
MED28-204ENST00000506409 ENOSF1Q7L5Y1 443 aa16.34■□□□□ 0.21
MED28-204ENST00000506409 ARHGAP18Q8N392 663 aa16.34■□□□□ 0.21
MED28-204ENST00000506409 CD101Q93033 1021 aa16.34■□□□□ 0.21
MED28-204ENST00000506409 NKD2Q969F2 451 aaPredicted RBP16.34■□□□□ 0.21
MED28-204ENST00000506409 OTUB2Q96DC9 234 aa16.34■□□□□ 0.21
MED28-204ENST00000506409 CDK5RAP1Q96SZ6 601 aaKnown RBP16.34■□□□□ 0.21
MED28-204ENST00000506409 FBRSL1Q9HCM7 1045 aaKnown RBP16.34■□□□□ 0.21
MED28-204ENST00000506409 DNMT3LQ9UJW3 386 aa16.34■□□□□ 0.21
MED28-204ENST00000506409 NUDT5Q9UKK9 219 aa16.34■□□□□ 0.21
MED28-204ENST00000506409 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.34■□□□□ 0.21
MED28-204ENST00000506409 GTPBP10A4D1E9 387 aaKnown RBP16.33■□□□□ 0.2
MED28-204ENST00000506409 M0QYV0 167 aa16.33■□□□□ 0.2
MED28-204ENST00000506409 MDM4O15151 490 aa16.33■□□□□ 0.2
MED28-204ENST00000506409 MBD3O95983 291 aa16.33■□□□□ 0.2
MED28-204ENST00000506409 ZBED1O96006 694 aa16.33■□□□□ 0.2
MED28-204ENST00000506409 ADH1CP00326 375 aa16.33■□□□□ 0.2
MED28-204ENST00000506409 EGFP01133 1207 aa16.33■□□□□ 0.2
MED28-204ENST00000506409 CALCAP01258 141 aa16.33■□□□□ 0.2
MED28-204ENST00000506409 PRKCSHP14314 528 aaPredicted RBP16.33■□□□□ 0.2
MED28-204ENST00000506409 SLC9A1P19634 815 aa16.33■□□□□ 0.2
MED28-204ENST00000506409 CXCL12P48061 93 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms