RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 RAB20Q9NX57 234 aa17.7■□□□□ 0.42
PDLIM7-215ENST00000506161 NUDT5Q9UKK9 219 aa17.7■□□□□ 0.42
PDLIM7-215ENST00000506161 DCDC2BA2VCK2 349 aa17.69■□□□□ 0.42
PDLIM7-215ENST00000506161 CALCAP01258 141 aa17.69■□□□□ 0.42
PDLIM7-215ENST00000506161 ADRB1P08588 477 aa17.69■□□□□ 0.42
PDLIM7-215ENST00000506161 PFKLP17858 780 aa17.69■□□□□ 0.42
PDLIM7-215ENST00000506161 PPP3CCP48454 512 aa17.69■□□□□ 0.42
PDLIM7-215ENST00000506161 MORC3Q14149 939 aa17.69■□□□□ 0.42
PDLIM7-215ENST00000506161 TCERG1LQ5VWI1 586 aa17.69■□□□□ 0.42
PDLIM7-215ENST00000506161 KLHL10Q6JEL2 608 aa17.69■□□□□ 0.42
PDLIM7-215ENST00000506161 RHBDF2Q6PJF5 856 aa17.69■□□□□ 0.42
PDLIM7-215ENST00000506161 SCD5Q86SK9 330 aa17.69■□□□□ 0.42
PDLIM7-215ENST00000506161 ADGRG2Q8IZP9 1017 aa17.69■□□□□ 0.42
PDLIM7-215ENST00000506161 CD101Q93033 1021 aa17.69■□□□□ 0.42
PDLIM7-215ENST00000506161 ATP2A3Q93084 1043 aa17.69■□□□□ 0.42
PDLIM7-215ENST00000506161 CISHQ9NSE2 258 aa17.69■□□□□ 0.42
PDLIM7-215ENST00000506161 COQ4Q9Y3A0 265 aa17.69■□□□□ 0.42
PDLIM7-215ENST00000506161 CACNA1GO43497 2377 aa17.69■□□□□ 0.42
PDLIM7-215ENST00000506161 K7EQS6 105 aa17.68■□□□□ 0.42
PDLIM7-215ENST00000506161 TULP2O00295 520 aa17.68■□□□□ 0.42
PDLIM7-215ENST00000506161 SLC16A3O15427 465 aaKnown RBP17.68■□□□□ 0.42
PDLIM7-215ENST00000506161 SMC2O95347 1197 aa17.68■□□□□ 0.42
PDLIM7-215ENST00000506161 FAM200BP0CF97 657 aa17.68■□□□□ 0.42
PDLIM7-215ENST00000506161 IRF1P10914 325 aa17.68■□□□□ 0.42
PDLIM7-215ENST00000506161 STX17P56962 302 aa17.68■□□□□ 0.42
PDLIM7-215ENST00000506161 FKBP3Q00688 224 aaKnown RBP17.68■□□□□ 0.42
PDLIM7-215ENST00000506161 GRSF1Q12849 480 aaKnown RBP eCLIP17.68■□□□□ 0.42
PDLIM7-215ENST00000506161 LRMPQ12912 555 aa17.68■□□□□ 0.42
PDLIM7-215ENST00000506161 DHCR24Q15392 516 aa17.68■□□□□ 0.42
PDLIM7-215ENST00000506161 TTC30AQ86WT1 665 aa17.68■□□□□ 0.42
PDLIM7-215ENST00000506161 BBS7Q8IWZ6 715 aa17.68■□□□□ 0.42
PDLIM7-215ENST00000506161 ELOA2Q8IYF1 753 aaPredicted RBP17.68■□□□□ 0.42
PDLIM7-215ENST00000506161 OVCA2Q8WZ82 227 aa17.68■□□□□ 0.42
PDLIM7-215ENST00000506161 KAT5Q92993 513 aa17.68■□□□□ 0.42
PDLIM7-215ENST00000506161 MED15Q96RN5 788 aa17.68■□□□□ 0.42
PDLIM7-215ENST00000506161 IMPG2Q9BZV3 1241 aa17.68■□□□□ 0.42
PDLIM7-215ENST00000506161 ZDHHC4Q9NPG8 344 aa17.68■□□□□ 0.42
PDLIM7-215ENST00000506161 SPTBN2O15020 2390 aa17.67■□□□□ 0.42
PDLIM7-215ENST00000506161 A0A1W2PQH9 124 aa17.67■□□□□ 0.42
PDLIM7-215ENST00000506161 HNRNPLP14866 589 aaKnown RBP eCLIP17.67■□□□□ 0.42
PDLIM7-215ENST00000506161 ACO1P21399 889 aaKnown RBP17.67■□□□□ 0.42
PDLIM7-215ENST00000506161 HECTD3Q5T447 861 aa17.67■□□□□ 0.42
PDLIM7-215ENST00000506161 PHTF2Q8N3S3 785 aa17.67■□□□□ 0.42
PDLIM7-215ENST00000506161 SYNPOQ8N3V7 929 aa17.67■□□□□ 0.42
PDLIM7-215ENST00000506161 PDZD8Q8NEN9 1154 aa17.67■□□□□ 0.42
PDLIM7-215ENST00000506161 RPLP0P6Q8NHW5 317 aa17.67■□□□□ 0.42
PDLIM7-215ENST00000506161 LMO3Q8TAP4 145 aa17.67■□□□□ 0.42
PDLIM7-215ENST00000506161 NDRG1Q92597 394 aaKnown RBP17.67■□□□□ 0.42
PDLIM7-215ENST00000506161 HHIPQ96QV1 700 aa17.67■□□□□ 0.42
PDLIM7-215ENST00000506161 TSG101Q99816 390 aa17.67■□□□□ 0.42
PDLIM7-215ENST00000506161 KLF16Q9BXK1 252 aaPredicted RBP17.67■□□□□ 0.42
PDLIM7-215ENST00000506161 EHD2Q9NZN4 543 aa17.67■□□□□ 0.42
PDLIM7-215ENST00000506161 USP18Q9UMW8 372 aa17.67■□□□□ 0.42
PDLIM7-215ENST00000506161 CTNND2Q9UQB3 1225 aa17.67■□□□□ 0.42
PDLIM7-215ENST00000506161 SDK1Q7Z5N4 2213 aa17.67■□□□□ 0.42
PDLIM7-215ENST00000506161 TRIM24O15164 1050 aa17.66■□□□□ 0.42
PDLIM7-215ENST00000506161 TLR5O60602 858 aa17.66■□□□□ 0.42
PDLIM7-215ENST00000506161 NFATC1O95644 943 aa17.66■□□□□ 0.42
PDLIM7-215ENST00000506161 KIF11P52732 1056 aa17.66■□□□□ 0.42
PDLIM7-215ENST00000506161 LRRC63Q05C16 580 aa17.66■□□□□ 0.42
PDLIM7-215ENST00000506161 LY6G5CQ5SRR4 150 aa17.66■□□□□ 0.42
PDLIM7-215ENST00000506161 NELFBQ8WX92 580 aa17.66■□□□□ 0.42
PDLIM7-215ENST00000506161 ZSWIM1Q9BR11 485 aa17.66■□□□□ 0.42
PDLIM7-215ENST00000506161 DUSP16Q9BY84 665 aa17.66■□□□□ 0.42
PDLIM7-215ENST00000506161 FAM126AQ9BYI3 521 aaPredicted RBP17.66■□□□□ 0.42
PDLIM7-215ENST00000506161 COMMD8Q9NX08 183 aa17.66■□□□□ 0.42
PDLIM7-215ENST00000506161 HCN2Q9UL51 889 aa17.66■□□□□ 0.42
PDLIM7-215ENST00000506161 SCML2Q9UQR0 700 aa17.66■□□□□ 0.42
PDLIM7-215ENST00000506161 RNF225M0QZC1 329 aaPredicted RBP17.65■□□□□ 0.42
PDLIM7-215ENST00000506161 GABBR2O75899 941 aa17.65■□□□□ 0.42
PDLIM7-215ENST00000506161 DRD1P21728 446 aa17.65■□□□□ 0.42
PDLIM7-215ENST00000506161 FMO5P49326 533 aa17.65■□□□□ 0.42
PDLIM7-215ENST00000506161 TUBP50607 506 aa17.65■□□□□ 0.42
PDLIM7-215ENST00000506161 PDE6CP51160 858 aa17.65■□□□□ 0.42
PDLIM7-215ENST00000506161 SEC13P55735 322 aa17.65■□□□□ 0.42
PDLIM7-215ENST00000506161 CUL2Q13617 745 aa17.65■□□□□ 0.42
PDLIM7-215ENST00000506161 EMC10Q5UCC4 262 aa17.65■□□□□ 0.42
PDLIM7-215ENST00000506161 BHLHA9Q7RTU4 235 aa17.65■□□□□ 0.42
PDLIM7-215ENST00000506161 LONP2Q86WA8 852 aa17.65■□□□□ 0.42
PDLIM7-215ENST00000506161 CCDC34Q96HJ3 373 aa17.65■□□□□ 0.42
PDLIM7-215ENST00000506161 TMEM176AQ96HP8 235 aa17.65■□□□□ 0.42
PDLIM7-215ENST00000506161 DHTKD1Q96HY7 919 aaPredicted RBP17.65■□□□□ 0.42
PDLIM7-215ENST00000506161 HEXIM2Q96MH2 286 aaKnown RBP17.65■□□□□ 0.42
PDLIM7-215ENST00000506161 CYLDQ9NQC7 956 aa17.65■□□□□ 0.42
PDLIM7-215ENST00000506161 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.65■□□□□ 0.42
PDLIM7-215ENST00000506161 ARMCX3Q9UH62 379 aaPredicted RBP17.65■□□□□ 0.42
PDLIM7-215ENST00000506161 USP3Q9Y6I4 520 aa17.65■□□□□ 0.42
PDLIM7-215ENST00000506161 TNRC6BQ9UPQ9 1833 aaKnown RBP17.65■□□□□ 0.42
PDLIM7-215ENST00000506161 ABCA7Q8IZY2 2146 aa17.65■□□□□ 0.42
PDLIM7-215ENST00000506161 MAP1BP46821 2468 aaKnown RBP17.64■□□□□ 0.42
PDLIM7-215ENST00000506161 NUP205Q92621 2012 aa17.64■□□□□ 0.41
PDLIM7-215ENST00000506161 E2F8A0AVK6 867 aa17.64■□□□□ 0.41
PDLIM7-215ENST00000506161 KDSRQ06136 332 aa17.64■□□□□ 0.41
PDLIM7-215ENST00000506161 ARHGAP17Q68EM7 881 aa17.64■□□□□ 0.41
PDLIM7-215ENST00000506161 PRR23BQ6ZRT6 265 aa17.64■□□□□ 0.41
PDLIM7-215ENST00000506161 PIGZQ86VD9 579 aa17.64■□□□□ 0.41
PDLIM7-215ENST00000506161 WDR5BQ86VZ2 330 aa17.64■□□□□ 0.41
PDLIM7-215ENST00000506161 TMEM25Q86YD3 366 aa17.64■□□□□ 0.41
PDLIM7-215ENST00000506161 ARHGEF19Q8IW93 802 aa17.64■□□□□ 0.41
PDLIM7-215ENST00000506161 NAT16Q8N8M0 369 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms