RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 TRAF3IP3Q9Y228 551 aa26.13■■□□□ 1.77
HERC4-212ENST00000505760 THADAQ6YHU6 1953 aa26.13■■□□□ 1.77
HERC4-212ENST00000505760 FAM92AA1XBS5 289 aa26.12■■□□□ 1.77
HERC4-212ENST00000505760 BEST1O76090 585 aa26.12■■□□□ 1.77
HERC4-212ENST00000505760 ZDHHC11BP0C7U3 371 aa26.12■■□□□ 1.77
HERC4-212ENST00000505760 NR2F2P24468 414 aa26.12■■□□□ 1.77
HERC4-212ENST00000505760 TIE1P35590 1138 aa26.12■■□□□ 1.77
HERC4-212ENST00000505760 GRIA2P42262 883 aa26.12■■□□□ 1.77
HERC4-212ENST00000505760 ASPAP45381 313 aa26.12■■□□□ 1.77
HERC4-212ENST00000505760 NDUFA8P51970 172 aa26.12■■□□□ 1.77
HERC4-212ENST00000505760 MAP3K7CLP57077 242 aa26.12■■□□□ 1.77
HERC4-212ENST00000505760 GAD2Q05329 585 aa26.12■■□□□ 1.77
HERC4-212ENST00000505760 CRY1Q16526 586 aa26.12■■□□□ 1.77
HERC4-212ENST00000505760 SFTPA1Q8IWL2 248 aa26.12■■□□□ 1.77
HERC4-212ENST00000505760 ALLCQ8N6M5 410 aa26.12■■□□□ 1.77
HERC4-212ENST00000505760 C12orf29Q8N999 325 aa26.12■■□□□ 1.77
HERC4-212ENST00000505760 ZMIZ2Q8NF64 920 aa26.12■■□□□ 1.77
HERC4-212ENST00000505760 CHAMP1Q96JM3 812 aa26.12■■□□□ 1.77
HERC4-212ENST00000505760 CNOT6LQ96LI5 555 aaKnown RBP26.12■■□□□ 1.77
HERC4-212ENST00000505760 CSNK1G1Q9HCP0 422 aa26.12■■□□□ 1.77
HERC4-212ENST00000505760 UTP3Q9NQZ2 479 aaKnown RBP eCLIP26.12■■□□□ 1.773e-11■■■■□ 20.8
HERC4-212ENST00000505760 ACACBO00763 2458 aa26.12■■□□□ 1.77
HERC4-212ENST00000505760 NUP205Q92621 2012 aa26.12■■□□□ 1.77
HERC4-212ENST00000505760 MAPK13O15264 365 aa26.11■■□□□ 1.77
HERC4-212ENST00000505760 ALDH1A2O94788 518 aa26.11■■□□□ 1.77
HERC4-212ENST00000505760 KLF8O95600 359 aaPredicted RBP26.11■■□□□ 1.77
HERC4-212ENST00000505760 PRR29P0C7W0 189 aa26.11■■□□□ 1.77
HERC4-212ENST00000505760 IRF1P10914 325 aa26.11■■□□□ 1.77
HERC4-212ENST00000505760 ADORA2BP29275 332 aa26.11■■□□□ 1.77
HERC4-212ENST00000505760 MESP2Q0VG99 397 aa26.11■■□□□ 1.77
HERC4-212ENST00000505760 C1orf220Q5T0J3 134 aa26.11■■□□□ 1.77
HERC4-212ENST00000505760 STPG1Q5TH74 334 aa26.11■■□□□ 1.77
HERC4-212ENST00000505760 BTBD8Q5XKL5 378 aa26.11■■□□□ 1.77
HERC4-212ENST00000505760 RASSF3Q86WH2 238 aa26.11■■□□□ 1.77
HERC4-212ENST00000505760 TXNDC5Q8NBS9 432 aaKnown RBP26.11■■□□□ 1.77
HERC4-212ENST00000505760 CNTNAP3BQ96NU0 1288 aa26.11■■□□□ 1.77
HERC4-212ENST00000505760 CNTNAP3Q9BZ76 1288 aa26.11■■□□□ 1.77
HERC4-212ENST00000505760 TLR8Q9NR97 1041 aaKnown RBP26.11■■□□□ 1.77
HERC4-212ENST00000505760 MAPK8IP1Q9UQF2 711 aa26.11■■□□□ 1.77
HERC4-212ENST00000505760 MYO18AQ92614 2054 aaKnown RBP26.1■■□□□ 1.77
HERC4-212ENST00000505760 TLR5O60602 858 aa26.1■■□□□ 1.77
HERC4-212ENST00000505760 RHOBTB3O94955 611 aa26.1■■□□□ 1.77
HERC4-212ENST00000505760 FAM200BP0CF97 657 aa26.1■■□□□ 1.77
HERC4-212ENST00000505760 KRT13P13646 458 aa26.1■■□□□ 1.77
HERC4-212ENST00000505760 HSF5Q4G112 596 aaPredicted RBP26.1■■□□□ 1.77
HERC4-212ENST00000505760 INTS8Q75QN2 995 aaKnown RBP26.1■■□□□ 1.77
HERC4-212ENST00000505760 BBS7Q8IWZ6 715 aa26.1■■□□□ 1.77
HERC4-212ENST00000505760 IL17RCQ8NAC3 791 aa26.1■■□□□ 1.77
HERC4-212ENST00000505760 MDGA1Q8NFP4 955 aa26.1■■□□□ 1.77
HERC4-212ENST00000505760 A0A0A0MRY4 1105 aa26.09■■□□□ 1.77
HERC4-212ENST00000505760 BCLAF3A2AJT9 711 aaKnown RBP26.09■■□□□ 1.77
HERC4-212ENST00000505760 CAVIN2O95810 425 aa26.09■■□□□ 1.77
HERC4-212ENST00000505760 TRIM49P0CI25 452 aa26.09■■□□□ 1.77
HERC4-212ENST00000505760 TRIM49CP0CI26 452 aa26.09■■□□□ 1.77
HERC4-212ENST00000505760 TNFRSF4P43489 277 aa26.09■■□□□ 1.77
HERC4-212ENST00000505760 GCLMP48507 274 aa26.09■■□□□ 1.77
HERC4-212ENST00000505760 ANO4Q32M45 955 aa26.09■■□□□ 1.77
HERC4-212ENST00000505760 TCEAL6Q6IPX3 200 aa26.09■■□□□ 1.77
HERC4-212ENST00000505760 TMEM92Q6UXU6 159 aa26.09■■□□□ 1.77
HERC4-212ENST00000505760 NAT16Q8N8M0 369 aa26.09■■□□□ 1.77
HERC4-212ENST00000505760 TCEAL3Q969E4 200 aa26.09■■□□□ 1.77
HERC4-212ENST00000505760 JAKMIP2Q96AA8 810 aa26.09■■□□□ 1.77
HERC4-212ENST00000505760 POLMQ9NP87 494 aaPredicted RBP26.09■■□□□ 1.77
HERC4-212ENST00000505760 ZDHHC9Q9Y397 364 aa26.09■■□□□ 1.77
HERC4-212ENST00000505760 EPG5Q9HCE0 2579 aa26.08■■□□□ 1.77
HERC4-212ENST00000505760 FAM237AA0A1B0GTK4 181 aa26.08■■□□□ 1.77
HERC4-212ENST00000505760 TBC1D3BA6NDS4 549 aa26.08■■□□□ 1.77
HERC4-212ENST00000505760 SGK1O00141 431 aa26.08■■□□□ 1.77
HERC4-212ENST00000505760 RPL13P26373 211 aaKnown RBP26.08■■□□□ 1.77
HERC4-212ENST00000505760 PGFP49763 221 aa26.08■■□□□ 1.77
HERC4-212ENST00000505760 INCA1Q0VD86 236 aa26.08■■□□□ 1.77
HERC4-212ENST00000505760 DPYDQ12882 1025 aa26.08■■□□□ 1.77
HERC4-212ENST00000505760 NFIL3Q16649 462 aa26.08■■□□□ 1.77
HERC4-212ENST00000505760 PREPLQ4J6C6 727 aaPredicted RBP26.08■■□□□ 1.77
HERC4-212ENST00000505760 EOGTQ5NDL2 527 aa26.08■■□□□ 1.77
HERC4-212ENST00000505760 EMC10Q5UCC4 262 aa26.08■■□□□ 1.77
HERC4-212ENST00000505760 PMS2CLQ68D20 193 aa26.08■■□□□ 1.77
HERC4-212ENST00000505760 FAM186BQ8IYM0 893 aa26.08■■□□□ 1.77
HERC4-212ENST00000505760 CCDC150Q8NCX0 1101 aa26.08■■□□□ 1.77
HERC4-212ENST00000505760 HNRNPABQ99729 332 aaKnown RBP26.08■■□□□ 1.77
HERC4-212ENST00000505760 DUSP9Q99956 384 aaKnown RBP26.08■■□□□ 1.77
HERC4-212ENST00000505760 NT5C1AQ9BXI3 368 aa26.08■■□□□ 1.77
HERC4-212ENST00000505760 DNAI2Q9GZS0 605 aa26.08■■□□□ 1.77
HERC4-212ENST00000505760 SCAND2PQ9GZW5 306 aaPredicted RBP26.08■■□□□ 1.77
HERC4-212ENST00000505760 MMRN2Q9H8L6 949 aa26.08■■□□□ 1.77
HERC4-212ENST00000505760 SPHK2Q9NRA0 654 aa26.08■■□□□ 1.77
HERC4-212ENST00000505760 DEC1Q9P2X7 70 aa26.08■■□□□ 1.77
HERC4-212ENST00000505760 CIZ1Q9ULV3 898 aaPredicted RBP26.08■■□□□ 1.77
HERC4-212ENST00000505760 ATP6V1DQ9Y5K8 247 aa26.08■■□□□ 1.77
HERC4-212ENST00000505760 HOXC11O43248 304 aaPredicted RBP26.07■■□□□ 1.76
HERC4-212ENST00000505760 KIR2DL1P43626 348 aaPredicted RBP26.07■■□□□ 1.76
HERC4-212ENST00000505760 RNF43Q68DV7 783 aa26.07■■□□□ 1.76
HERC4-212ENST00000505760 KRBA2Q6ZNG9 492 aa26.07■■□□□ 1.76
HERC4-212ENST00000505760 CLEC20AQ6ZU45 233 aa26.07■■□□□ 1.76
HERC4-212ENST00000505760 NUDT18Q6ZVK8 323 aa26.07■■□□□ 1.76
HERC4-212ENST00000505760 TAS1R2Q8TE23 839 aa26.07■■□□□ 1.76
HERC4-212ENST00000505760 CYFIP2Q96F07 1278 aa26.07■■□□□ 1.76
HERC4-212ENST00000505760 TWNKQ96RR1 684 aa26.07■■□□□ 1.76
HERC4-212ENST00000505760 CYP3A43Q9HB55 503 aa26.07■■□□□ 1.76
HERC4-212ENST00000505760 BCCIPQ9P287 314 aaKnown RBP eCLIP26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms