RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 WASP42768 502 aa6.22□□□□□ -1.41
GYPB-205ENST00000505583 MAPK8P45983 427 aa6.22□□□□□ -1.41
GYPB-205ENST00000505583 NASPP49321 788 aaPredicted RBP6.22□□□□□ -1.41
GYPB-205ENST00000505583 EMP3P54852 163 aa6.22□□□□□ -1.41
GYPB-205ENST00000505583 CYP24A1Q07973 514 aa6.22□□□□□ -1.41
GYPB-205ENST00000505583 ORC1Q13415 861 aa6.22□□□□□ -1.41
GYPB-205ENST00000505583 PSMD6Q15008 389 aa6.22□□□□□ -1.41
GYPB-205ENST00000505583 MAPRE1Q15691 268 aaKnown RBP6.22□□□□□ -1.41
GYPB-205ENST00000505583 UAP1L1Q3KQV9 507 aa6.22□□□□□ -1.41
GYPB-205ENST00000505583 TRIM61Q5EBN2 209 aa6.22□□□□□ -1.41
GYPB-205ENST00000505583 LY6G5CQ5SRR4 150 aa6.22□□□□□ -1.41
GYPB-205ENST00000505583 KIAA1211LQ6NV74 962 aa6.22□□□□□ -1.41
GYPB-205ENST00000505583 SHC4Q6S5L8 630 aa6.22□□□□□ -1.41
GYPB-205ENST00000505583 UNQ6494/PRO21346Q6UXR6 183 aa6.22□□□□□ -1.41
GYPB-205ENST00000505583 CYP2U1Q7Z449 544 aa6.22□□□□□ -1.41
GYPB-205ENST00000505583 TMEM25Q86YD3 366 aa6.22□□□□□ -1.41
GYPB-205ENST00000505583 BBS7Q8IWZ6 715 aa6.22□□□□□ -1.41
GYPB-205ENST00000505583 ETFBKMTQ8IXQ9 262 aa6.22□□□□□ -1.41
GYPB-205ENST00000505583 CCDC65Q8IXS2 484 aa6.22□□□□□ -1.41
GYPB-205ENST00000505583 FUKQ8N0W3 1084 aa6.22□□□□□ -1.41
GYPB-205ENST00000505583 LINC00301Q8NCQ3 95 aa6.22□□□□□ -1.41
GYPB-205ENST00000505583 B3GALNT2Q8NCR0 500 aa6.22□□□□□ -1.41
GYPB-205ENST00000505583 ZMIZ2Q8NF64 920 aa6.22□□□□□ -1.41
GYPB-205ENST00000505583 OR2I1PQ8NGU4 316 aa6.22□□□□□ -1.41
GYPB-205ENST00000505583 HMGB4Q8WW32 186 aa6.22□□□□□ -1.41
GYPB-205ENST00000505583 GATA6Q92908 595 aa6.22□□□□□ -1.41
GYPB-205ENST00000505583 DHX58Q96C10 678 aa6.22□□□□□ -1.41
GYPB-205ENST00000505583 P2RY11Q96G91 374 aa6.22□□□□□ -1.41
GYPB-205ENST00000505583 CEP295NLQ96MC4 621 aa6.22□□□□□ -1.41
GYPB-205ENST00000505583 KCNK17Q96T54 332 aa6.22□□□□□ -1.41
GYPB-205ENST00000505583 ACOX2Q99424 681 aa6.22□□□□□ -1.41
GYPB-205ENST00000505583 CGRRF1Q99675 332 aa6.22□□□□□ -1.41
GYPB-205ENST00000505583 SCNM1Q9BWG6 230 aa6.22□□□□□ -1.41
GYPB-205ENST00000505583 ELOVL4Q9GZR5 314 aa6.22□□□□□ -1.41
GYPB-205ENST00000505583 BLZF1Q9H2G9 400 aa6.22□□□□□ -1.41
GYPB-205ENST00000505583 TNMDQ9H2S6 317 aa6.22□□□□□ -1.41
GYPB-205ENST00000505583 SNX25Q9H3E2 840 aa6.22□□□□□ -1.41
GYPB-205ENST00000505583 SMYD3Q9H7B4 428 aa6.22□□□□□ -1.41
GYPB-205ENST00000505583 CCSER2Q9H7U1 834 aa6.22□□□□□ -1.41
GYPB-205ENST00000505583 CD93Q9NPY3 652 aa6.22□□□□□ -1.41
GYPB-205ENST00000505583 TMEM9BQ9NQ34 198 aa6.22□□□□□ -1.41
GYPB-205ENST00000505583 ARHGEF4Q9NR80 690 aa6.22□□□□□ -1.41
GYPB-205ENST00000505583 IL37Q9NZH6 218 aa6.22□□□□□ -1.41
GYPB-205ENST00000505583 ZMIZ1Q9ULJ6 1067 aa6.22□□□□□ -1.41
GYPB-205ENST00000505583 MORC2Q9Y6X9 1032 aaPredicted RBP6.22□□□□□ -1.41
GYPB-205ENST00000505583 AKAP13Q12802 2813 aa6.22□□□□□ -1.41
GYPB-205ENST00000505583 CHD6Q8TD26 2715 aa6.21□□□□□ -1.41
GYPB-205ENST00000505583 SPAARA0A1B0GVQ0 90 aa6.21□□□□□ -1.42
GYPB-205ENST00000505583 A0A1W2PQF6 199 aa6.21□□□□□ -1.42
GYPB-205ENST00000505583 TCRBV21S2A2A0A5A6 115 aa6.21□□□□□ -1.42
GYPB-205ENST00000505583 RCCD1A6NED2 376 aa6.21□□□□□ -1.42
GYPB-205ENST00000505583 A8MXQ7 604 aa6.21□□□□□ -1.42
GYPB-205ENST00000505583 KIAA0391O15091 583 aaKnown RBP6.21□□□□□ -1.42
GYPB-205ENST00000505583 EIF3DO15371 548 aaKnown RBP eCLIP6.21□□□□□ -1.42
GYPB-205ENST00000505583 GREM1O60565 184 aa6.21□□□□□ -1.42
GYPB-205ENST00000505583 TULP3O75386 442 aa6.21□□□□□ -1.42
GYPB-205ENST00000505583 VNN1O95497 513 aa6.21□□□□□ -1.42
GYPB-205ENST00000505583 TBX18O95935 607 aa6.21□□□□□ -1.42
GYPB-205ENST00000505583 APODP05090 189 aa6.21□□□□□ -1.42
GYPB-205ENST00000505583 ZDHHC11BP0C7U3 371 aa6.21□□□□□ -1.42
GYPB-205ENST00000505583 IRF1P10914 325 aa6.21□□□□□ -1.42
GYPB-205ENST00000505583 ADH5P11766 374 aa6.21□□□□□ -1.42
GYPB-205ENST00000505583 CEACAM1P13688 526 aa6.21□□□□□ -1.42
GYPB-205ENST00000505583 CCDC130P13994 396 aa6.21□□□□□ -1.42
GYPB-205ENST00000505583 ENGP17813 658 aa6.21□□□□□ -1.42
GYPB-205ENST00000505583 GABRG2P18507 467 aa6.21□□□□□ -1.42
GYPB-205ENST00000505583 PDCP20941 246 aa6.21□□□□□ -1.42
GYPB-205ENST00000505583 CSRP1P21291 193 aaKnown RBP6.21□□□□□ -1.42
GYPB-205ENST00000505583 ITPKAP23677 461 aa6.21□□□□□ -1.42
GYPB-205ENST00000505583 YWHAQP27348 245 aa6.21□□□□□ -1.42
GYPB-205ENST00000505583 EIF2DP41214 584 aaKnown RBP6.21□□□□□ -1.42
GYPB-205ENST00000505583 GRIA2P42262 883 aa6.21□□□□□ -1.42
GYPB-205ENST00000505583 PDE6CP51160 858 aa6.21□□□□□ -1.42
GYPB-205ENST00000505583 TNNC1P63316 161 aa6.21□□□□□ -1.42
GYPB-205ENST00000505583 FAM193AP78312 1265 aa6.21□□□□□ -1.42
GYPB-205ENST00000505583 ASIC1P78348 528 aa6.21□□□□□ -1.42
GYPB-205ENST00000505583 DLG4P78352 724 aa6.21□□□□□ -1.42
GYPB-205ENST00000505583 STK38Q15208 465 aa6.21□□□□□ -1.42
GYPB-205ENST00000505583 SURF1Q15526 300 aa6.21□□□□□ -1.42
GYPB-205ENST00000505583 PROX2Q3B8N5 592 aa6.21□□□□□ -1.42
GYPB-205ENST00000505583 FAM26FQ5R3K3 315 aa6.21□□□□□ -1.42
GYPB-205ENST00000505583 DAB2IPQ5VWQ8 1189 aa6.21□□□□□ -1.42
GYPB-205ENST00000505583 TDRD10Q5VZ19 366 aaKnown RBP6.21□□□□□ -1.42
GYPB-205ENST00000505583 EGFLAMQ63HQ2 1017 aa6.21□□□□□ -1.42
GYPB-205ENST00000505583 TOGARAM2Q6ZUX3 1019 aa6.21□□□□□ -1.42
GYPB-205ENST00000505583 NUDT18Q6ZVK8 323 aa6.21□□□□□ -1.42
GYPB-205ENST00000505583 FAM35AQ86V20 835 aa6.21□□□□□ -1.42
GYPB-205ENST00000505583 NUP93Q8N1F7 819 aa6.21□□□□□ -1.42
GYPB-205ENST00000505583 KDF1Q8NAX2 398 aaPredicted RBP6.21□□□□□ -1.42
GYPB-205ENST00000505583 XXYLT1Q8NBI6 393 aa6.21□□□□□ -1.42
GYPB-205ENST00000505583 WHAMMQ8TF30 809 aa6.21□□□□□ -1.42
GYPB-205ENST00000505583 FBXO32Q969P5 355 aa6.21□□□□□ -1.42
GYPB-205ENST00000505583 EXOC4Q96A65 974 aa6.21□□□□□ -1.42
GYPB-205ENST00000505583 SLITRK1Q96PX8 696 aa6.21□□□□□ -1.42
GYPB-205ENST00000505583 HS3ST6Q96QI5 342 aa6.21□□□□□ -1.42
GYPB-205ENST00000505583 SMOQ99835 787 aa6.21□□□□□ -1.42
GYPB-205ENST00000505583 C7orf25Q9BPX7 421 aa6.21□□□□□ -1.42
GYPB-205ENST00000505583 KRTAP3-3Q9BYR6 98 aa6.21□□□□□ -1.42
GYPB-205ENST00000505583 KRTAP3-2Q9BYR7 98 aa6.21□□□□□ -1.42
GYPB-205ENST00000505583 SLC6A17Q9H1V8 727 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms