RNA–Protein interactions for RNA: ENST00000505555.5

SDHA-206, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,230 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-206ENST00000505555 SNRNP25Q9BV90 132 aaKnown RBP20.34■□□□□ 0.85
SDHA-206ENST00000505555 FAM124BQ9H5Z6 455 aaPredicted RBP20.34■□□□□ 0.85
SDHA-206ENST00000505555 USP29Q9HBJ7 922 aa20.34■□□□□ 0.85
SDHA-206ENST00000505555 GOLGA2P5Q9HBQ8 144 aa20.34■□□□□ 0.85
SDHA-206ENST00000505555 PCDH18Q9HCL0 1135 aa20.34■□□□□ 0.85
SDHA-206ENST00000505555 SLC24A2Q9UI40 661 aa20.34■□□□□ 0.85
SDHA-206ENST00000505555 CPA4Q9UI42 421 aa20.34■□□□□ 0.85
SDHA-206ENST00000505555 CHMP2BQ9UQN3 213 aa20.34■□□□□ 0.85
SDHA-206ENST00000505555 PIN4Q9Y237 131 aaKnown RBP20.34■□□□□ 0.85
SDHA-206ENST00000505555 A6NJR5 290 aa20.34■□□□□ 0.85
SDHA-206ENST00000505555 E7ESA3 106 aa20.34■□□□□ 0.85
SDHA-206ENST00000505555 KCNN4O15554 427 aa20.34■□□□□ 0.85
SDHA-206ENST00000505555 STIP1P31948 543 aaKnown RBP20.34■□□□□ 0.85
SDHA-206ENST00000505555 RDXP35241 583 aaKnown RBP20.34■□□□□ 0.85
SDHA-206ENST00000505555 HDAC4P56524 1084 aa20.34■□□□□ 0.85
SDHA-206ENST00000505555 MAP7D3Q8IWC1 876 aa20.34■□□□□ 0.85
SDHA-206ENST00000505555 SGSM3Q96HU1 749 aa20.34■□□□□ 0.85
SDHA-206ENST00000505555 PARK7Q99497 189 aaKnown RBP20.34■□□□□ 0.85
SDHA-206ENST00000505555 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.34■□□□□ 0.85
SDHA-206ENST00000505555 NRCAMQ92823 1304 aa20.34■□□□□ 0.85
SDHA-206ENST00000505555 DPYSL4O14531 572 aa20.33■□□□□ 0.85
SDHA-206ENST00000505555 F2P00734 622 aa20.33■□□□□ 0.85
SDHA-206ENST00000505555 LCP1P13796 627 aa20.33■□□□□ 0.85
SDHA-206ENST00000505555 PHBP35232 272 aa20.33■□□□□ 0.85
SDHA-206ENST00000505555 RNASELQ05823 741 aaKnown RBP20.33■□□□□ 0.85
SDHA-206ENST00000505555 SLC1A5Q15758 541 aa20.33■□□□□ 0.85
SDHA-206ENST00000505555 FAM110CQ1W6H9 321 aa20.33■□□□□ 0.85
SDHA-206ENST00000505555 OLFML2BQ68BL8 750 aa20.33■□□□□ 0.85
SDHA-206ENST00000505555 LRRC52Q8N7C0 313 aa20.33■□□□□ 0.85
SDHA-206ENST00000505555 KBTBD7Q8WVZ9 684 aa20.33■□□□□ 0.85
SDHA-206ENST00000505555 SLC5A4Q9NY91 659 aa20.33■□□□□ 0.85
SDHA-206ENST00000505555 FLRT1Q9NZU1 646 aa20.33■□□□□ 0.85
SDHA-206ENST00000505555 CNTN3Q9P232 1028 aa20.33■□□□□ 0.85
SDHA-206ENST00000505555 SMIM28A0A1B0GU29 152 aa20.33■□□□□ 0.84
SDHA-206ENST00000505555 HGSO14964 777 aaPredicted RBP20.33■□□□□ 0.84
SDHA-206ENST00000505555 PRPF4O43172 522 aaKnown RBP eCLIP20.33■□□□□ 0.84
SDHA-206ENST00000505555 TREHO43280 583 aa20.33■□□□□ 0.84
SDHA-206ENST00000505555 SUN1O94901 812 aa20.33■□□□□ 0.84
SDHA-206ENST00000505555 KRT4P19013 534 aa20.33■□□□□ 0.84
SDHA-206ENST00000505555 CA4P22748 312 aa20.33■□□□□ 0.84
SDHA-206ENST00000505555 RBL1P28749 1068 aa20.33■□□□□ 0.84
SDHA-206ENST00000505555 ELK3P41970 407 aa20.33■□□□□ 0.84
SDHA-206ENST00000505555 BCAR1P56945 870 aa20.33■□□□□ 0.84
SDHA-206ENST00000505555 PDK2Q15119 407 aa20.33■□□□□ 0.84
SDHA-206ENST00000505555 SWT1Q5T5J6 900 aaKnown RBP20.33■□□□□ 0.84
SDHA-206ENST00000505555 FAXCQ5TGI0 409 aa20.33■□□□□ 0.84
SDHA-206ENST00000505555 SPRYD7Q5W111 196 aa20.33■□□□□ 0.84
SDHA-206ENST00000505555 APBB1IPQ7Z5R6 666 aaPredicted RBP20.33■□□□□ 0.84
SDHA-206ENST00000505555 CCDC33Q8N5R6 958 aa20.33■□□□□ 0.84
SDHA-206ENST00000505555 FAF2Q96CS3 445 aa20.33■□□□□ 0.84
SDHA-206ENST00000505555 THOC1Q96FV9 657 aaKnown RBP20.33■□□□□ 0.84
SDHA-206ENST00000505555 PAFAH2Q99487 392 aa20.33■□□□□ 0.84
SDHA-206ENST00000505555 GNEQ9Y223 722 aaKnown RBP20.33■□□□□ 0.84
SDHA-206ENST00000505555 SMIM35A0A1B0GVV1 85 aa20.32■□□□□ 0.84
SDHA-206ENST00000505555 APOL1O14791 398 aa20.32■□□□□ 0.84
SDHA-206ENST00000505555 GNL1P36915 607 aaPredicted RBP20.32■□□□□ 0.84
SDHA-206ENST00000505555 DNAJC3Q13217 504 aa20.32■□□□□ 0.84
SDHA-206ENST00000505555 MFSD10Q14728 455 aa20.32■□□□□ 0.84
SDHA-206ENST00000505555 FBXO47Q5MNV8 452 aa20.32■□□□□ 0.84
SDHA-206ENST00000505555 PITPNM3Q9BZ71 974 aa20.32■□□□□ 0.84
SDHA-206ENST00000505555 ACSS3Q9H6R3 686 aa20.32■□□□□ 0.84
SDHA-206ENST00000505555 RAB6BQ9NRW1 208 aa20.32■□□□□ 0.84
SDHA-206ENST00000505555 MBLAC1A4D2B0 266 aaPredicted RBP20.31■□□□□ 0.84
SDHA-206ENST00000505555 UBOX5O94941 541 aa20.31■□□□□ 0.84
SDHA-206ENST00000505555 KCNJ11Q14654 390 aa20.31■□□□□ 0.84
SDHA-206ENST00000505555 TLK2Q86UE8 772 aa20.31■□□□□ 0.84
SDHA-206ENST00000505555 KLF6Q99612 283 aaPredicted RBP20.31■□□□□ 0.84
SDHA-206ENST00000505555 SLC12A4Q9UP95 1085 aa20.31■□□□□ 0.84
SDHA-206ENST00000505555 KPNA7A9QM74 516 aa20.31■□□□□ 0.84
SDHA-206ENST00000505555 GOLGA8RI6L899 631 aa20.31■□□□□ 0.84
SDHA-206ENST00000505555 PIRO00625 290 aa20.31■□□□□ 0.84
SDHA-206ENST00000505555 TYROBPO43914 113 aa20.31■□□□□ 0.84
SDHA-206ENST00000505555 SETSIPP0DME0 302 aa20.31■□□□□ 0.84
SDHA-206ENST00000505555 BEX3Q00994 111 aa20.31■□□□□ 0.84
SDHA-206ENST00000505555 SOX4Q06945 474 aaPredicted RBP20.31■□□□□ 0.84
SDHA-206ENST00000505555 SNX17Q15036 470 aa20.31■□□□□ 0.84
SDHA-206ENST00000505555 UNC93AQ86WB7 457 aa20.31■□□□□ 0.84
SDHA-206ENST00000505555 AGGF1Q8N302 714 aaeCLIP20.31■□□□□ 0.84
SDHA-206ENST00000505555 C12orf65Q9H3J6 166 aaKnown RBP20.31■□□□□ 0.84
SDHA-206ENST00000505555 KLC4Q9NSK0 619 aa20.31■□□□□ 0.84
SDHA-206ENST00000505555 PRKAG3Q9UGI9 489 aa20.31■□□□□ 0.84
SDHA-206ENST00000505555 UBQLN1Q9UMX0 589 aaKnown RBP20.31■□□□□ 0.84
SDHA-206ENST00000505555 ARL2BPQ9Y2Y0 163 aa20.31■□□□□ 0.84
SDHA-206ENST00000505555 SLC15A5A6NIM6 579 aa20.3■□□□□ 0.84
SDHA-206ENST00000505555 UNCXA6NJT0 531 aa20.3■□□□□ 0.84
SDHA-206ENST00000505555 SPARCL1Q14515 664 aa20.3■□□□□ 0.84
SDHA-206ENST00000505555 MTFR1Q15390 333 aa20.3■□□□□ 0.84
SDHA-206ENST00000505555 ARHGAP17Q68EM7 881 aa20.3■□□□□ 0.84
SDHA-206ENST00000505555 ADGRD1Q6QNK2 874 aa20.3■□□□□ 0.84
SDHA-206ENST00000505555 TEKT4Q8WW24 435 aa20.3■□□□□ 0.84
SDHA-206ENST00000505555 NDRG1Q92597 394 aaKnown RBP20.3■□□□□ 0.84
SDHA-206ENST00000505555 RMDN2Q96LZ7 410 aa20.3■□□□□ 0.84
SDHA-206ENST00000505555 PHACTR1Q9C0D0 580 aa20.3■□□□□ 0.84
SDHA-206ENST00000505555 SLCO1B3Q9NPD5 702 aa20.3■□□□□ 0.84
SDHA-206ENST00000505555 SENP1Q9P0U3 644 aa20.3■□□□□ 0.84
SDHA-206ENST00000505555 SMG5Q9UPR3 1016 aaKnown RBP20.3■□□□□ 0.84
SDHA-206ENST00000505555 MSH2P43246 934 aa20.3■□□□□ 0.84
SDHA-206ENST00000505555 CDC42EP1Q00587 391 aa20.3■□□□□ 0.84
SDHA-206ENST00000505555 MGAT5Q09328 741 aa20.3■□□□□ 0.84
SDHA-206ENST00000505555 CCL14Q16627 93 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms