RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 NUDT22Q9BRQ3 303 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 TTPALQ9BTX7 342 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 AGXT2Q9BYV1 514 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 TTYH3Q9C0H2 523 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 REXO4Q9GZR2 422 aaKnown RBP4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 CHODLQ9H9P2 273 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 A0A087X1B8 175 aa4.37□□□□□ -1.71
TRAPPC13-208ENST00000505553 A0A1W2PPH5 198 aa4.37□□□□□ -1.71
TRAPPC13-208ENST00000505553 A0A1W2PRX2 142 aa4.37□□□□□ -1.71
TRAPPC13-208ENST00000505553 PGPEP1LA6NFU8 196 aa4.37□□□□□ -1.71
TRAPPC13-208ENST00000505553 J3KTA2 159 aa4.37□□□□□ -1.71
TRAPPC13-208ENST00000505553 ZSCAN9O15535 394 aaPredicted RBP4.37□□□□□ -1.71
TRAPPC13-208ENST00000505553 VPS4BO75351 444 aa4.37□□□□□ -1.71
TRAPPC13-208ENST00000505553 KRT38O76015 456 aa4.37□□□□□ -1.71
TRAPPC13-208ENST00000505553 TFRCP02786 760 aaKnown RBP4.37□□□□□ -1.71
TRAPPC13-208ENST00000505553 CHMP24386 653 aa4.37□□□□□ -1.71
TRAPPC13-208ENST00000505553 AKT1P31749 480 aa4.37□□□□□ -1.71
TRAPPC13-208ENST00000505553 ZEB1P37275 1124 aaPredicted RBP4.37□□□□□ -1.71
TRAPPC13-208ENST00000505553 PXNP49023 591 aaPredicted RBP4.37□□□□□ -1.71
TRAPPC13-208ENST00000505553 ZNF844Q08AG5 666 aa4.37□□□□□ -1.71
TRAPPC13-208ENST00000505553 RIN1Q13671 783 aa4.37□□□□□ -1.71
TRAPPC13-208ENST00000505553 KRT32Q14532 448 aa4.37□□□□□ -1.71
TRAPPC13-208ENST00000505553 SMAD1Q15797 465 aaKnown RBP4.37□□□□□ -1.71
TRAPPC13-208ENST00000505553 CSRP2Q16527 193 aa4.37□□□□□ -1.71
TRAPPC13-208ENST00000505553 CTXN3Q4LDR2 81 aa4.37□□□□□ -1.71
TRAPPC13-208ENST00000505553 WDR45BQ5MNZ6 344 aa4.37□□□□□ -1.71
TRAPPC13-208ENST00000505553 TTC22Q5TAA0 569 aa4.37□□□□□ -1.71
TRAPPC13-208ENST00000505553 ATG16L1Q676U5 607 aa4.37□□□□□ -1.71
TRAPPC13-208ENST00000505553 DPY19L2P1Q6NXN4 242 aa4.37□□□□□ -1.71
TRAPPC13-208ENST00000505553 KRT77Q7Z794 578 aa4.37□□□□□ -1.71
TRAPPC13-208ENST00000505553 SPARTQ8N0X7 666 aa4.37□□□□□ -1.71
TRAPPC13-208ENST00000505553 ZMIZ2Q8NF64 920 aa4.37□□□□□ -1.71
TRAPPC13-208ENST00000505553 TDRD7Q8NHU6 1098 aaKnown RBP4.37□□□□□ -1.71
TRAPPC13-208ENST00000505553 BPIFB1Q8TDL5 484 aa4.37□□□□□ -1.71
TRAPPC13-208ENST00000505553 PPP2R3CQ969Q6 453 aa4.37□□□□□ -1.71
TRAPPC13-208ENST00000505553 ZDHHC12Q96GR4 267 aa4.37□□□□□ -1.71
TRAPPC13-208ENST00000505553 RSRC1Q96IZ7 334 aaKnown RBP4.37□□□□□ -1.71
TRAPPC13-208ENST00000505553 MED15Q96RN5 788 aa4.37□□□□□ -1.71
TRAPPC13-208ENST00000505553 REEP2Q9BRK0 252 aa4.37□□□□□ -1.71
TRAPPC13-208ENST00000505553 SDF4Q9BRK5 362 aa4.37□□□□□ -1.71
TRAPPC13-208ENST00000505553 VPS16Q9H269 839 aa4.37□□□□□ -1.71
TRAPPC13-208ENST00000505553 NELFAQ9H3P2 528 aa4.37□□□□□ -1.71
TRAPPC13-208ENST00000505553 UNKLQ9H9P5 680 aaKnown RBP4.37□□□□□ -1.71
TRAPPC13-208ENST00000505553 SEC61A2Q9H9S3 476 aa4.37□□□□□ -1.71
TRAPPC13-208ENST00000505553 TMLHEQ9NVH6 421 aa4.37□□□□□ -1.71
TRAPPC13-208ENST00000505553 ETAA1Q9NY74 926 aa4.37□□□□□ -1.71
TRAPPC13-208ENST00000505553 ORC3Q9UBD5 711 aaPredicted RBP4.37□□□□□ -1.71
TRAPPC13-208ENST00000505553 DNAJB11Q9UBS4 358 aa4.37□□□□□ -1.71
TRAPPC13-208ENST00000505553 ZFR2Q9UPR6 939 aaKnown RBP4.37□□□□□ -1.71
TRAPPC13-208ENST00000505553 RAD54BQ9Y620 910 aa4.37□□□□□ -1.71
TRAPPC13-208ENST00000505553 LMTK3Q96Q04 1460 aa4.36□□□□□ -1.71
TRAPPC13-208ENST00000505553 SAC3D1A6NKF1 404 aa4.36□□□□□ -1.71
TRAPPC13-208ENST00000505553 DCLK1O15075 740 aa4.36□□□□□ -1.71
TRAPPC13-208ENST00000505553 USO1O60763 962 aaKnown RBP4.36□□□□□ -1.71
TRAPPC13-208ENST00000505553 ITGB1P05556 798 aa4.36□□□□□ -1.71
TRAPPC13-208ENST00000505553 HNRNPA1P09651 372 aaKnown RBP eCLIP4.36□□□□□ -1.71
TRAPPC13-208ENST00000505553 ARP10275 920 aa4.36□□□□□ -1.71
TRAPPC13-208ENST00000505553 GNAT2P19087 354 aa4.36□□□□□ -1.71
TRAPPC13-208ENST00000505553 SLC6A2P23975 617 aa4.36□□□□□ -1.71
TRAPPC13-208ENST00000505553 KLRK1P26718 216 aa4.36□□□□□ -1.71
TRAPPC13-208ENST00000505553 SERPINA4P29622 427 aa4.36□□□□□ -1.71
TRAPPC13-208ENST00000505553 COPB2P35606 906 aa4.36□□□□□ -1.71
TRAPPC13-208ENST00000505553 RAD52P43351 418 aa4.36□□□□□ -1.71
TRAPPC13-208ENST00000505553 MAN2A2P49641 1150 aa4.36□□□□□ -1.71
TRAPPC13-208ENST00000505553 DGKEP52429 567 aa4.36□□□□□ -1.71
TRAPPC13-208ENST00000505553 RBM5P52756 815 aaKnown RBP eCLIP4.36□□□□□ -1.71
TRAPPC13-208ENST00000505553 PRKAG1P54619 331 aa4.36□□□□□ -1.71
TRAPPC13-208ENST00000505553 CSHL1Q14406 222 aa4.36□□□□□ -1.71
TRAPPC13-208ENST00000505553 GRM4Q14833 912 aa4.36□□□□□ -1.71
TRAPPC13-208ENST00000505553 BTBD16Q32M84 506 aa4.36□□□□□ -1.71
TRAPPC13-208ENST00000505553 LRCH2Q5VUJ6 765 aa4.36□□□□□ -1.71
TRAPPC13-208ENST00000505553 TSHZ3Q63HK5 1081 aa4.36□□□□□ -1.71
TRAPPC13-208ENST00000505553 HAUS3Q68CZ6 603 aa4.36□□□□□ -1.71
TRAPPC13-208ENST00000505553 ABLIM2Q6H8Q1 611 aa4.36□□□□□ -1.71
TRAPPC13-208ENST00000505553 DRICH1Q6PGQ1 229 aaPredicted RBP4.36□□□□□ -1.71
TRAPPC13-208ENST00000505553 FAM111BQ6SJ93 734 aa4.36□□□□□ -1.71
TRAPPC13-208ENST00000505553 MED25Q71SY5 747 aa4.36□□□□□ -1.71
TRAPPC13-208ENST00000505553 GPRIN1Q7Z2K8 1008 aa4.36□□□□□ -1.71
TRAPPC13-208ENST00000505553 KCTD20Q7Z5Y7 419 aa4.36□□□□□ -1.71
TRAPPC13-208ENST00000505553 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.36□□□□□ -1.71
TRAPPC13-208ENST00000505553 CFAP52Q8N1V2 620 aa4.36□□□□□ -1.71
TRAPPC13-208ENST00000505553 ANKRD52Q8NB46 1076 aa4.36□□□□□ -1.71
TRAPPC13-208ENST00000505553 SHCBP1Q8NEM2 672 aa4.36□□□□□ -1.71
TRAPPC13-208ENST00000505553 VOPP1Q96AW1 172 aa4.36□□□□□ -1.71
TRAPPC13-208ENST00000505553 ZNF512Q96ME7 567 aaPredicted RBP4.36□□□□□ -1.71
TRAPPC13-208ENST00000505553 WWC2-AS2Q96NR7 200 aa4.36□□□□□ -1.71
TRAPPC13-208ENST00000505553 TRIB1Q96RU8 372 aa4.36□□□□□ -1.71
TRAPPC13-208ENST00000505553 TRIM5Q9C035 493 aa4.36□□□□□ -1.71
TRAPPC13-208ENST00000505553 LMAN2LQ9H0V9 348 aa4.36□□□□□ -1.71
TRAPPC13-208ENST00000505553 CCDC68Q9H2F9 335 aa4.36□□□□□ -1.71
TRAPPC13-208ENST00000505553 PDCL3Q9H2J4 239 aa4.36□□□□□ -1.71
TRAPPC13-208ENST00000505553 RNPEPQ9H4A4 650 aa4.36□□□□□ -1.71
TRAPPC13-208ENST00000505553 SPON1Q9HCB6 807 aa4.36□□□□□ -1.71
TRAPPC13-208ENST00000505553 POGKQ9P215 609 aa4.36□□□□□ -1.71
TRAPPC13-208ENST00000505553 TDRD9Q8NDG6 1382 aaKnown RBP4.36□□□□□ -1.71
TRAPPC13-208ENST00000505553 FAM90A18PA6NE21 464 aa4.35□□□□□ -1.71
TRAPPC13-208ENST00000505553 FAM90A16PA6NEW6 464 aa4.35□□□□□ -1.71
TRAPPC13-208ENST00000505553 FAM90A9PA6NNJ1 464 aa4.35□□□□□ -1.71
TRAPPC13-208ENST00000505553 FAM90A5PA8MXJ8 464 aa4.35□□□□□ -1.71
TRAPPC13-208ENST00000505553 SRGAP2O75044 1071 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms