RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 ARL4AP40617 200 aa11.81□□□□□ -0.52
NFKB1-205ENST00000505458 KYNUQ16719 465 aa11.81□□□□□ -0.52
NFKB1-205ENST00000505458 YTHDF3Q7Z739 585 aaKnown RBP11.81□□□□□ -0.52
NFKB1-205ENST00000505458 SCML4Q8N228 414 aa11.81□□□□□ -0.52
NFKB1-205ENST00000505458 MYCBPAPQ8TBZ2 947 aa11.81□□□□□ -0.52
NFKB1-205ENST00000505458 TMEM121Q9BTD3 319 aa11.81□□□□□ -0.52
NFKB1-205ENST00000505458 KLC2Q9H0B6 622 aa11.81□□□□□ -0.52
NFKB1-205ENST00000505458 PTGESO14684 152 aa11.81□□□□□ -0.52
NFKB1-205ENST00000505458 ADAMTS4O75173 837 aa11.81□□□□□ -0.52
NFKB1-205ENST00000505458 KIAA0754O94854 1291 aa11.81□□□□□ -0.52
NFKB1-205ENST00000505458 PECAM1P16284 738 aaPredicted RBP11.81□□□□□ -0.52
NFKB1-205ENST00000505458 ADORA2BP29275 332 aa11.81□□□□□ -0.52
NFKB1-205ENST00000505458 NOS2P35228 1153 aa11.81□□□□□ -0.52
NFKB1-205ENST00000505458 CCDC142Q17RM4 750 aa11.81□□□□□ -0.52
NFKB1-205ENST00000505458 SLC25A52Q3SY17 297 aa11.81□□□□□ -0.52
NFKB1-205ENST00000505458 ANKRD20A8PQ5CZ79 823 aa11.81□□□□□ -0.52
NFKB1-205ENST00000505458 KCNT1Q5JUK3 1230 aa11.81□□□□□ -0.52
NFKB1-205ENST00000505458 PDZD4Q76G19 769 aaPredicted RBP11.81□□□□□ -0.52
NFKB1-205ENST00000505458 SMC1BQ8NDV3 1235 aa11.81□□□□□ -0.52
NFKB1-205ENST00000505458 KLHDC9Q8NEP7 349 aa11.81□□□□□ -0.52
NFKB1-205ENST00000505458 TRPV1Q8NER1 839 aa11.81□□□□□ -0.52
NFKB1-205ENST00000505458 SLC2A14Q8TDB8 520 aa11.81□□□□□ -0.52
NFKB1-205ENST00000505458 EPS8L3Q8TE67 593 aaKnown RBP11.81□□□□□ -0.52
NFKB1-205ENST00000505458 TRIB2Q92519 343 aa11.81□□□□□ -0.52
NFKB1-205ENST00000505458 ARHGEF2Q92974 986 aaKnown RBP11.81□□□□□ -0.52
NFKB1-205ENST00000505458 LRRC39Q96DD0 335 aa11.81□□□□□ -0.52
NFKB1-205ENST00000505458 PEBP4Q96S96 227 aa11.81□□□□□ -0.52
NFKB1-205ENST00000505458 SELENOSQ9BQE4 189 aa11.81□□□□□ -0.52
NFKB1-205ENST00000505458 SNRNP25Q9BV90 132 aaKnown RBP11.81□□□□□ -0.52
NFKB1-205ENST00000505458 KLK14Q9P0G3 267 aa11.81□□□□□ -0.52
NFKB1-205ENST00000505458 C5orf60A6NFR6 353 aa11.8□□□□□ -0.52
NFKB1-205ENST00000505458 STK10O94804 968 aaKnown RBP11.8□□□□□ -0.52
NFKB1-205ENST00000505458 MAGEA6P43360 314 aa11.8□□□□□ -0.52
NFKB1-205ENST00000505458 DYNLT1P63172 113 aa11.8□□□□□ -0.52
NFKB1-205ENST00000505458 ZNF200P98182 395 aaPredicted RBP11.8□□□□□ -0.52
NFKB1-205ENST00000505458 GRIK3Q13003 919 aa11.8□□□□□ -0.52
NFKB1-205ENST00000505458 SCYL2Q6P3W7 929 aa11.8□□□□□ -0.52
NFKB1-205ENST00000505458 ARHGEF18Q6ZSZ5 1173 aa11.8□□□□□ -0.52
NFKB1-205ENST00000505458 IRGQQ8WZA9 623 aa11.8□□□□□ -0.52
NFKB1-205ENST00000505458 APBB2Q92870 758 aa11.8□□□□□ -0.52
NFKB1-205ENST00000505458 PLCD4Q9BRC7 762 aa11.8□□□□□ -0.52
NFKB1-205ENST00000505458 CFHR5Q9BXR6 569 aa11.8□□□□□ -0.52
NFKB1-205ENST00000505458 SSU72Q9NP77 194 aaKnown RBP11.8□□□□□ -0.52
NFKB1-205ENST00000505458 RSPH14Q9UHP6 348 aa11.8□□□□□ -0.52
NFKB1-205ENST00000505458 ABT1Q9ULW3 272 aaKnown RBP11.8□□□□□ -0.52
NFKB1-205ENST00000505458 EXOC1LA0A1B0GW35 172 aa11.8□□□□□ -0.52
NFKB1-205ENST00000505458 H3BRJ5 948 aa11.8□□□□□ -0.52
NFKB1-205ENST00000505458 H7C0C1 242 aa11.8□□□□□ -0.52
NFKB1-205ENST00000505458 INPPL1O15357 1258 aa11.8□□□□□ -0.52
NFKB1-205ENST00000505458 ZBED1O96006 694 aa11.8□□□□□ -0.52
NFKB1-205ENST00000505458 ATP5OP48047 213 aa11.8□□□□□ -0.52
NFKB1-205ENST00000505458 CYP4V2Q6ZWL3 525 aaPredicted RBP11.8□□□□□ -0.52
NFKB1-205ENST00000505458 RNF180Q86T96 592 aa11.8□□□□□ -0.52
NFKB1-205ENST00000505458 NAT8LQ8N9F0 302 aa11.8□□□□□ -0.52
NFKB1-205ENST00000505458 ZNF473Q8WTR7 871 aaKnown RBP11.8□□□□□ -0.52
NFKB1-205ENST00000505458 SGSM3Q96HU1 749 aa11.8□□□□□ -0.52
NFKB1-205ENST00000505458 SENP8Q96LD8 212 aa11.8□□□□□ -0.52
NFKB1-205ENST00000505458 CCT8L2Q96SF2 557 aa11.8□□□□□ -0.52
NFKB1-205ENST00000505458 CNGB3Q9NQW8 809 aa11.8□□□□□ -0.52
NFKB1-205ENST00000505458 SMG5Q9UPR3 1016 aaKnown RBP11.8□□□□□ -0.52
NFKB1-205ENST00000505458 CLUHO75153 1309 aa11.8□□□□□ -0.52
NFKB1-205ENST00000505458 SPTLC1O15269 473 aa11.8□□□□□ -0.52
NFKB1-205ENST00000505458 FGFR1P11362 822 aa11.8□□□□□ -0.52
NFKB1-205ENST00000505458 FLT3LGP49771 235 aa11.8□□□□□ -0.52
NFKB1-205ENST00000505458 SOX4Q06945 474 aaPredicted RBP11.8□□□□□ -0.52
NFKB1-205ENST00000505458 ZC3H12AQ5D1E8 599 aaKnown RBP11.8□□□□□ -0.52
NFKB1-205ENST00000505458 GDF6Q6KF10 455 aaPredicted RBP11.8□□□□□ -0.52
NFKB1-205ENST00000505458 DSTYKQ6XUX3 929 aa11.8□□□□□ -0.52
NFKB1-205ENST00000505458 CHMP6Q96FZ7 201 aa11.8□□□□□ -0.52
NFKB1-205ENST00000505458 PNPLA8Q9NP80 782 aa11.8□□□□□ -0.52
NFKB1-205ENST00000505458 NKIRAS1Q9NYS0 192 aa11.8□□□□□ -0.52
NFKB1-205ENST00000505458 AP4E1Q9UPM8 1137 aa11.8□□□□□ -0.52
NFKB1-205ENST00000505458 TMEM88BA6NKF7 163 aa11.79□□□□□ -0.52
NFKB1-205ENST00000505458 C9IYK1 514 aa11.79□□□□□ -0.52
NFKB1-205ENST00000505458 F9P00740 461 aa11.79□□□□□ -0.52
NFKB1-205ENST00000505458 CCDC130P13994 396 aa11.79□□□□□ -0.52
NFKB1-205ENST00000505458 RPL22P35268 128 aaKnown RBP11.79□□□□□ -0.52
NFKB1-205ENST00000505458 HDAC4P56524 1084 aa11.79□□□□□ -0.52
NFKB1-205ENST00000505458 MRPS5P82675 430 aaKnown RBP11.79□□□□□ -0.52
NFKB1-205ENST00000505458 ARHGEF6Q15052 776 aa11.79□□□□□ -0.52
NFKB1-205ENST00000505458 CDO1Q16878 200 aa11.79□□□□□ -0.52
NFKB1-205ENST00000505458 C15orf59Q2T9L4 293 aaPredicted RBP11.79□□□□□ -0.52
NFKB1-205ENST00000505458 GKAP1Q5VSY0 366 aaPredicted RBP11.79□□□□□ -0.52
NFKB1-205ENST00000505458 CXCL17Q6UXB2 119 aa11.79□□□□□ -0.52
NFKB1-205ENST00000505458 BEND5Q7L4P6 421 aa11.79□□□□□ -0.52
NFKB1-205ENST00000505458 KHSRPQ92945 711 aaKnown RBP eCLIP11.79□□□□□ -0.52
NFKB1-205ENST00000505458 ACSF2Q96CM8 615 aaPredicted RBP11.79□□□□□ -0.52
NFKB1-205ENST00000505458 SYT15Q9BQS2 421 aa11.79□□□□□ -0.52
NFKB1-205ENST00000505458 MED10Q9BTT4 135 aa11.79□□□□□ -0.52
NFKB1-205ENST00000505458 RNF39Q9H2S5 420 aa11.79□□□□□ -0.52
NFKB1-205ENST00000505458 DPEP3Q9H4B8 488 aa11.79□□□□□ -0.52
NFKB1-205ENST00000505458 CYP11A1P05108 521 aa11.79□□□□□ -0.52
NFKB1-205ENST00000505458 PDGFRBP09619 1106 aa11.79□□□□□ -0.52
NFKB1-205ENST00000505458 CCT5P48643 541 aa11.79□□□□□ -0.52
NFKB1-205ENST00000505458 YWHAZP63104 245 aaKnown RBP11.79□□□□□ -0.52
NFKB1-205ENST00000505458 ATP11AP98196 1134 aa11.79□□□□□ -0.52
NFKB1-205ENST00000505458 CCDC38Q502W7 563 aa11.79□□□□□ -0.52
NFKB1-205ENST00000505458 TRNP1Q6NT89 227 aa11.79□□□□□ -0.52
NFKB1-205ENST00000505458 PIGZQ86VD9 579 aa11.79□□□□□ -0.52
NFKB1-205ENST00000505458 SCUBE3Q8IX30 993 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms