RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 PGLYRP2Q96PD5 576 aa9.82□□□□□ -0.84
TPM3-218ENST00000505010 PSMB7Q99436 277 aa9.82□□□□□ -0.84
TPM3-218ENST00000505010 SMOQ99835 787 aa9.82□□□□□ -0.84
TPM3-218ENST00000505010 TLR10Q9BXR5 811 aa9.82□□□□□ -0.84
TPM3-218ENST00000505010 LRRC4Q9HBW1 653 aa9.82□□□□□ -0.84
TPM3-218ENST00000505010 DMAP1Q9NPF5 467 aaPredicted RBP9.82□□□□□ -0.84
TPM3-218ENST00000505010 IP6K2Q9UHH9 426 aa9.82□□□□□ -0.84
TPM3-218ENST00000505010 SNX12Q9UMY4 172 aa9.82□□□□□ -0.84
TPM3-218ENST00000505010 USTQ9Y2C2 406 aa9.82□□□□□ -0.84
TPM3-218ENST00000505010 PCDHB12Q9Y5F1 795 aa9.82□□□□□ -0.84
TPM3-218ENST00000505010 SAR1BQ9Y6B6 198 aa9.82□□□□□ -0.84
TPM3-218ENST00000505010 GREB1Q4ZG55 1949 aa9.82□□□□□ -0.84
TPM3-218ENST00000505010 ZNF638Q14966 1978 aaKnown RBP9.81□□□□□ -0.84
TPM3-218ENST00000505010 TMEM191CA6NGB0 347 aa9.81□□□□□ -0.84
TPM3-218ENST00000505010 SIGLEC16A6NMB1 481 aa9.81□□□□□ -0.84
TPM3-218ENST00000505010 PAPSS1O43252 624 aaPredicted RBP9.81□□□□□ -0.84
TPM3-218ENST00000505010 SRGAP2O75044 1071 aa9.81□□□□□ -0.84
TPM3-218ENST00000505010 GRAP2O75791 330 aa9.81□□□□□ -0.84
TPM3-218ENST00000505010 GABBR2O75899 941 aa9.81□□□□□ -0.84
TPM3-218ENST00000505010 PROSCO94903 275 aa9.81□□□□□ -0.84
TPM3-218ENST00000505010 CSPG5O95196 566 aa9.81□□□□□ -0.84
TPM3-218ENST00000505010 EFEMP2O95967 443 aa9.81□□□□□ -0.84
TPM3-218ENST00000505010 SOD2P04179 222 aa9.81□□□□□ -0.84
TPM3-218ENST00000505010 URODP06132 367 aa9.81□□□□□ -0.84
TPM3-218ENST00000505010 GPD1P21695 349 aa9.81□□□□□ -0.84
TPM3-218ENST00000505010 PSMA2P25787 234 aa9.81□□□□□ -0.84
TPM3-218ENST00000505010 MAN1A1P33908 653 aa9.81□□□□□ -0.84
TPM3-218ENST00000505010 RFC1P35251 1148 aaPredicted RBP9.81□□□□□ -0.84
TPM3-218ENST00000505010 GJC1P36383 396 aa9.81□□□□□ -0.84
TPM3-218ENST00000505010 GRIK1P39086 918 aa9.81□□□□□ -0.84
TPM3-218ENST00000505010 SSR1P43307 286 aaKnown RBP9.81□□□□□ -0.84
TPM3-218ENST00000505010 RPL34P49207 117 aaKnown RBP9.81□□□□□ -0.84
TPM3-218ENST00000505010 TKTL1P51854 596 aa9.81□□□□□ -0.84
TPM3-218ENST00000505010 RNASE9P60153 205 aaKnown RBP9.81□□□□□ -0.84
TPM3-218ENST00000505010 SLC6A3Q01959 620 aa9.81□□□□□ -0.84
TPM3-218ENST00000505010 OGDHQ02218 1023 aa9.81□□□□□ -0.84
TPM3-218ENST00000505010 ZNF252P-AS1Q0IIN9 211 aa9.81□□□□□ -0.84
TPM3-218ENST00000505010 MRPL58Q14197 206 aaKnown RBP9.81□□□□□ -0.84
TPM3-218ENST00000505010 CBX2Q14781 532 aaPredicted RBP9.81□□□□□ -0.84
TPM3-218ENST00000505010 PAPD7Q5XG87 772 aaKnown RBP9.81□□□□□ -0.84
TPM3-218ENST00000505010 OLFML1Q6UWY5 402 aa9.81□□□□□ -0.84
TPM3-218ENST00000505010 GPRIN1Q7Z2K8 1008 aa9.81□□□□□ -0.84
TPM3-218ENST00000505010 TMEM110Q86TL2 294 aa9.81□□□□□ -0.84
TPM3-218ENST00000505010 ZDHHC17Q8IUH5 632 aa9.81□□□□□ -0.84
TPM3-218ENST00000505010 SCN4BQ8IWT1 228 aa9.81□□□□□ -0.84
TPM3-218ENST00000505010 SCUBE3Q8IX30 993 aa9.81□□□□□ -0.84
TPM3-218ENST00000505010 RNF168Q8IYW5 571 aaPredicted RBP9.81□□□□□ -0.84
TPM3-218ENST00000505010 EMC1Q8N766 993 aa9.81□□□□□ -0.84
TPM3-218ENST00000505010 ZMIZ2Q8NF64 920 aa9.81□□□□□ -0.84
TPM3-218ENST00000505010 CLEC4CQ8WTT0 213 aa9.81□□□□□ -0.84
TPM3-218ENST00000505010 KCTD13Q8WZ19 329 aa9.81□□□□□ -0.84
TPM3-218ENST00000505010 ASIC4Q96FT7 647 aa9.81□□□□□ -0.84
TPM3-218ENST00000505010 PIWIL1Q96J94 861 aaKnown RBP9.81□□□□□ -0.84
TPM3-218ENST00000505010 MSLNLQ96KJ4 702 aa9.81□□□□□ -0.84
TPM3-218ENST00000505010 RPGRIP1Q96KN7 1286 aa9.81□□□□□ -0.84
TPM3-218ENST00000505010 OSBPL9Q96SU4 736 aa9.81□□□□□ -0.84
TPM3-218ENST00000505010 KCNK16Q96T55 309 aa9.81□□□□□ -0.84
TPM3-218ENST00000505010 OXCT2Q9BYC2 517 aaPredicted RBP9.81□□□□□ -0.84
TPM3-218ENST00000505010 ABCB6Q9NP58 842 aa9.81□□□□□ -0.84
TPM3-218ENST00000505010 TMEM30AQ9NV96 361 aa9.81□□□□□ -0.84
TPM3-218ENST00000505010 MTRRQ9UBK8 725 aa9.81□□□□□ -0.84
TPM3-218ENST00000505010 LCMT1Q9UIC8 334 aa9.81□□□□□ -0.84
TPM3-218ENST00000505010 CDC23Q9UJX2 597 aa9.81□□□□□ -0.84
TPM3-218ENST00000505010 PCDHB5Q9Y5E4 795 aa9.81□□□□□ -0.84
TPM3-218ENST00000505010 MRFAP1Q9Y605 127 aa9.81□□□□□ -0.84
TPM3-218ENST00000505010 ALG6Q9Y672 507 aa9.81□□□□□ -0.84
TPM3-218ENST00000505010 CDY1Q9Y6F8 540 aa9.81□□□□□ -0.84
TPM3-218ENST00000505010 FAM186AA6NE01 2351 aa9.81□□□□□ -0.84
TPM3-218ENST00000505010 PRR23AA6NEV1 266 aa9.8□□□□□ -0.84
TPM3-218ENST00000505010 MIF4GDA9UHW6 222 aaKnown RBP9.8□□□□□ -0.84
TPM3-218ENST00000505010 F8VP50 259 aa9.8□□□□□ -0.84
TPM3-218ENST00000505010 KCNK3O14649 394 aa9.8□□□□□ -0.84
TPM3-218ENST00000505010 RIOK3O14730 519 aaKnown RBP9.8□□□□□ -0.84
TPM3-218ENST00000505010 TCP1P17987 556 aaKnown RBP9.8□□□□□ -0.84
TPM3-218ENST00000505010 RPL17P18621 184 aaKnown RBP9.8□□□□□ -0.84
TPM3-218ENST00000505010 CYP2F1P24903 491 aa9.8□□□□□ -0.84
TPM3-218ENST00000505010 CXCR5P32302 372 aa9.8□□□□□ -0.84
TPM3-218ENST00000505010 CA8P35219 290 aa9.8□□□□□ -0.84
TPM3-218ENST00000505010 SLC1A1P43005 524 aa9.8□□□□□ -0.84
TPM3-218ENST00000505010 MARCKSL1P49006 195 aa9.8□□□□□ -0.84
TPM3-218ENST00000505010 ADCY1Q08828 1119 aa9.8□□□□□ -0.84
TPM3-218ENST00000505010 IFRD2Q12894 506 aaPredicted RBP9.8□□□□□ -0.84
TPM3-218ENST00000505010 WHAMMP3Q1A5X7 153 aa9.8□□□□□ -0.84
TPM3-218ENST00000505010 DAB2IPQ5VWQ8 1189 aa9.8□□□□□ -0.84
TPM3-218ENST00000505010 RSPO2Q6UXX9 243 aaPredicted RBP9.8□□□□□ -0.84
TPM3-218ENST00000505010 DDX53Q86TM3 631 aaKnown RBP9.8□□□□□ -0.84
TPM3-218ENST00000505010 UBL4BQ8N7F7 174 aa9.8□□□□□ -0.84
TPM3-218ENST00000505010 SMRP1Q8NCR6 262 aa9.8□□□□□ -0.84
TPM3-218ENST00000505010 PIK3R5Q8WYR1 880 aa9.8□□□□□ -0.84
TPM3-218ENST00000505010 HES6Q96HZ4 224 aa9.8□□□□□ -0.84
TPM3-218ENST00000505010 FUBP3Q96I24 572 aaKnown RBP eCLIP9.8□□□□□ -0.84
TPM3-218ENST00000505010 PHF7Q9BWX1 381 aaPredicted RBP9.8□□□□□ -0.84
TPM3-218ENST00000505010 ULBP1Q9BZM6 244 aa9.8□□□□□ -0.84
TPM3-218ENST00000505010 L2HGDHQ9H9P8 463 aa9.8□□□□□ -0.84
TPM3-218ENST00000505010 CSNK1G1Q9HCP0 422 aa9.8□□□□□ -0.84
TPM3-218ENST00000505010 BACE2Q9Y5Z0 518 aa9.8□□□□□ -0.84
TPM3-218ENST00000505010 MTMR11A4FU01 709 aa9.79□□□□□ -0.84
TPM3-218ENST00000505010 HHLA1C9JL84 531 aa9.79□□□□□ -0.84
TPM3-218ENST00000505010 TRIM66O15016 1216 aa9.79□□□□□ -0.84
TPM3-218ENST00000505010 ZNF185O15231 689 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms