RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 TKTL1P51854 596 aa10.36□□□□□ -0.75
NR1I3-220ENST00000505005 ZNF132P52740 706 aa10.36□□□□□ -0.75
NR1I3-220ENST00000505005 COPB1P53618 953 aaKnown RBP10.36□□□□□ -0.75
NR1I3-220ENST00000505005 CYP4F8P98187 520 aa10.36□□□□□ -0.75
NR1I3-220ENST00000505005 IFRD2Q12894 506 aaPredicted RBP10.36□□□□□ -0.75
NR1I3-220ENST00000505005 MTF1Q14872 753 aa10.36□□□□□ -0.75
NR1I3-220ENST00000505005 ARHGAP44Q17R89 818 aa10.36□□□□□ -0.75
NR1I3-220ENST00000505005 GOLGA7BQ2TAP0 167 aa10.36□□□□□ -0.75
NR1I3-220ENST00000505005 FBXO43Q4G163 708 aa10.36□□□□□ -0.75
NR1I3-220ENST00000505005 MIIPQ5JXC2 388 aa10.36□□□□□ -0.75
NR1I3-220ENST00000505005 SCARA3Q6AZY7 606 aa10.36□□□□□ -0.75
NR1I3-220ENST00000505005 VITQ6UXI7 678 aa10.36□□□□□ -0.75
NR1I3-220ENST00000505005 TRIM72Q6ZMU5 477 aa10.36□□□□□ -0.75
NR1I3-220ENST00000505005 RSRC2Q7L4I2 434 aaKnown RBP10.36□□□□□ -0.75
NR1I3-220ENST00000505005 CACNA2D4Q7Z3S7 1137 aa10.36□□□□□ -0.75
NR1I3-220ENST00000505005 TMEM150AQ86TG1 271 aa10.36□□□□□ -0.75
NR1I3-220ENST00000505005 PIGZQ86VD9 579 aa10.36□□□□□ -0.75
NR1I3-220ENST00000505005 TMEM35BQ8NCS4 154 aa10.36□□□□□ -0.75
NR1I3-220ENST00000505005 GPR152Q8TDT2 470 aa10.36□□□□□ -0.75
NR1I3-220ENST00000505005 IPO4Q8TEX9 1081 aaKnown RBP10.36□□□□□ -0.75
NR1I3-220ENST00000505005 SLC35F5Q8WV83 523 aa10.36□□□□□ -0.75
NR1I3-220ENST00000505005 OSCP1Q8WVF1 389 aa10.36□□□□□ -0.75
NR1I3-220ENST00000505005 ASIC4Q96FT7 647 aa10.36□□□□□ -0.75
NR1I3-220ENST00000505005 TWNKQ96RR1 684 aa10.36□□□□□ -0.75
NR1I3-220ENST00000505005 ARID3AQ99856 593 aa10.36□□□□□ -0.75
NR1I3-220ENST00000505005 DDX50Q9BQ39 737 aaKnown RBP10.36□□□□□ -0.75
NR1I3-220ENST00000505005 KXD1Q9BQD3 176 aa10.36□□□□□ -0.75
NR1I3-220ENST00000505005 DUS2Q9NX74 493 aaKnown RBP10.36□□□□□ -0.75
NR1I3-220ENST00000505005 RRN3Q9NYV6 651 aa10.36□□□□□ -0.75
NR1I3-220ENST00000505005 CHORDC1Q9UHD1 332 aaPredicted RBP10.36□□□□□ -0.75
NR1I3-220ENST00000505005 SIT1Q9Y3P8 196 aa10.36□□□□□ -0.75
NR1I3-220ENST00000505005 FARP1Q9Y4F1 1045 aaPredicted RBP10.36□□□□□ -0.75
NR1I3-220ENST00000505005 PAXBP1Q9Y5B6 917 aa10.36□□□□□ -0.75
NR1I3-220ENST00000505005 NME7Q9Y5B8 376 aa10.36□□□□□ -0.75
NR1I3-220ENST00000505005 SYCE3A1L190 88 aa10.35□□□□□ -0.75
NR1I3-220ENST00000505005 M0QYV0 167 aa10.35□□□□□ -0.75
NR1I3-220ENST00000505005 HCRTO43612 131 aa10.35□□□□□ -0.75
NR1I3-220ENST00000505005 ATG13O75143 517 aa10.35□□□□□ -0.75
NR1I3-220ENST00000505005 LSM8O95777 96 aaKnown RBP10.35□□□□□ -0.75
NR1I3-220ENST00000505005 LATS1O95835 1130 aa10.35□□□□□ -0.75
NR1I3-220ENST00000505005 ADH1CP00326 375 aa10.35□□□□□ -0.75
NR1I3-220ENST00000505005 CFHP08603 1231 aa10.35□□□□□ -0.75
NR1I3-220ENST00000505005 RARGP13631 454 aa10.35□□□□□ -0.75
NR1I3-220ENST00000505005 GJA1P17302 382 aa10.35□□□□□ -0.75
NR1I3-220ENST00000505005 AOC1P19801 751 aa10.35□□□□□ -0.75
NR1I3-220ENST00000505005 FCARP24071 287 aa10.35□□□□□ -0.75
NR1I3-220ENST00000505005 RPS9P46781 194 aaKnown RBP10.35□□□□□ -0.75
NR1I3-220ENST00000505005 PDE4CQ08493 712 aa10.35□□□□□ -0.75
NR1I3-220ENST00000505005 RUNX3Q13761 415 aa10.35□□□□□ -0.75
NR1I3-220ENST00000505005 RAPGEF1Q13905 1077 aa10.35□□□□□ -0.75
NR1I3-220ENST00000505005 EFHC1Q5JVL4 640 aa10.35□□□□□ -0.75
NR1I3-220ENST00000505005 SDHAF4Q5VUM1 108 aa10.35□□□□□ -0.75
NR1I3-220ENST00000505005 MAMSTRQ6ZN01 415 aa10.35□□□□□ -0.75
NR1I3-220ENST00000505005 TOGARAM2Q6ZUX3 1019 aa10.35□□□□□ -0.75
NR1I3-220ENST00000505005 UNC45BQ8IWX7 931 aa10.35□□□□□ -0.75
NR1I3-220ENST00000505005 FAM71AQ8IYT1 594 aa10.35□□□□□ -0.75
NR1I3-220ENST00000505005 SIX5Q8N196 739 aa10.35□□□□□ -0.75
NR1I3-220ENST00000505005 AOPEPQ8N6M6 819 aa10.35□□□□□ -0.75
NR1I3-220ENST00000505005 ARL14EPQ8N8R7 260 aaPredicted RBP10.35□□□□□ -0.75
NR1I3-220ENST00000505005 C1orf131Q8NDD1 294 aaKnown RBP10.35□□□□□ -0.75
NR1I3-220ENST00000505005 ZMIZ2Q8NF64 920 aa10.35□□□□□ -0.75
NR1I3-220ENST00000505005 USP13Q92995 863 aaPredicted RBP10.35□□□□□ -0.75
NR1I3-220ENST00000505005 ZSWIM3Q96MP5 696 aa10.35□□□□□ -0.75
NR1I3-220ENST00000505005 LRFN3Q9BTN0 628 aa10.35□□□□□ -0.75
NR1I3-220ENST00000505005 GKN1Q9NS71 199 aa10.35□□□□□ -0.75
NR1I3-220ENST00000505005 ASNSD1Q9NWL6 643 aa10.35□□□□□ -0.75
NR1I3-220ENST00000505005 HMGXB4Q9UGU5 601 aa10.35□□□□□ -0.75
NR1I3-220ENST00000505005 SLC12A6Q9UHW9 1150 aa10.35□□□□□ -0.75
NR1I3-220ENST00000505005 NAGPAQ9UK23 515 aa10.35□□□□□ -0.75
NR1I3-220ENST00000505005 HBS1LQ9Y450 684 aaKnown RBP10.35□□□□□ -0.75
NR1I3-220ENST00000505005 HHLA1C9JL84 531 aa10.34□□□□□ -0.75
NR1I3-220ENST00000505005 CAPN9O14815 690 aa10.34□□□□□ -0.75
NR1I3-220ENST00000505005 CYBBP04839 570 aa10.34□□□□□ -0.75
NR1I3-220ENST00000505005 TPM1P09493 284 aa10.34□□□□□ -0.75
NR1I3-220ENST00000505005 SLC2A3P11169 496 aa10.34□□□□□ -0.75
NR1I3-220ENST00000505005 DRD1P21728 446 aa10.34□□□□□ -0.75
NR1I3-220ENST00000505005 AVPR2P30518 371 aa10.34□□□□□ -0.75
NR1I3-220ENST00000505005 GBP1P32455 592 aa10.34□□□□□ -0.75
NR1I3-220ENST00000505005 SCNN1AP37088 669 aa10.34□□□□□ -0.75
NR1I3-220ENST00000505005 VIPR2P41587 438 aa10.34□□□□□ -0.75
NR1I3-220ENST00000505005 RPL34P49207 117 aaKnown RBP10.34□□□□□ -0.75
NR1I3-220ENST00000505005 HARS2P49590 506 aaKnown RBP10.34□□□□□ -0.75
NR1I3-220ENST00000505005 YWHAGP61981 247 aaKnown RBP eCLIP10.34□□□□□ -0.75
NR1I3-220ENST00000505005 GRSF1Q12849 480 aaKnown RBP eCLIP10.34□□□□□ -0.75
NR1I3-220ENST00000505005 USP4Q13107 963 aa10.34□□□□□ -0.75
NR1I3-220ENST00000505005 NNTQ13423 1086 aa10.34□□□□□ -0.75
NR1I3-220ENST00000505005 DRAP1Q14919 205 aaPredicted RBP10.34□□□□□ -0.75
NR1I3-220ENST00000505005 ZNF77Q15935 545 aa10.34□□□□□ -0.75
NR1I3-220ENST00000505005 ZSCAN23Q3MJ62 389 aa10.34□□□□□ -0.75
NR1I3-220ENST00000505005 PKDCCQ504Y2 493 aa10.34□□□□□ -0.75
NR1I3-220ENST00000505005 C10orf120Q5SQS8 335 aa10.34□□□□□ -0.75
NR1I3-220ENST00000505005 C11orf57Q6ZUT1 292 aaPredicted RBP10.34□□□□□ -0.75
NR1I3-220ENST00000505005 HTR3DQ70Z44 454 aa10.34□□□□□ -0.75
NR1I3-220ENST00000505005 TMEM110Q86TL2 294 aa10.34□□□□□ -0.75
NR1I3-220ENST00000505005 ARHGEF19Q8IW93 802 aa10.34□□□□□ -0.75
NR1I3-220ENST00000505005 SCAMP5Q8TAC9 235 aa10.34□□□□□ -0.75
NR1I3-220ENST00000505005 KCNV2Q8TDN2 545 aa10.34□□□□□ -0.75
NR1I3-220ENST00000505005 SH3RF2Q8TEC5 729 aa10.34□□□□□ -0.75
NR1I3-220ENST00000505005 RSAD2Q8WXG1 361 aa10.34□□□□□ -0.75
NR1I3-220ENST00000505005 FAM3CQ92520 227 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms