RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 HEXIM2Q96MH2 286 aaKnown RBP26.77■■□□□ 1.88
PVT1-201ENST00000504719 DUSP16Q9BY84 665 aa26.77■■□□□ 1.88
PVT1-201ENST00000504719 TLR8Q9NR97 1041 aaKnown RBP26.77■■□□□ 1.88
PVT1-201ENST00000504719 SCML2Q9UQR0 700 aa26.77■■□□□ 1.88
PVT1-201ENST00000504719 KIAA1549LQ6ZVL6 1849 aa26.76■■□□□ 1.88
PVT1-201ENST00000504719 SLC9A3R1O14745 358 aaPredicted RBP26.76■■□□□ 1.87
PVT1-201ENST00000504719 CCDC183Q5T5S1 534 aa26.76■■□□□ 1.87
PVT1-201ENST00000504719 PKN3Q6P5Z2 889 aa26.76■■□□□ 1.87
PVT1-201ENST00000504719 JAKMIP2Q96AA8 810 aa26.76■■□□□ 1.87
PVT1-201ENST00000504719 EPC1Q9H2F5 836 aa26.76■■□□□ 1.87
PVT1-201ENST00000504719 ACO1P21399 889 aaKnown RBP26.75■■□□□ 1.87
PVT1-201ENST00000504719 FMO5P49326 533 aa26.75■■□□□ 1.87
PVT1-201ENST00000504719 MARSP56192 900 aaKnown RBP26.75■■□□□ 1.87
PVT1-201ENST00000504719 GAB4Q2WGN9 574 aa26.75■■□□□ 1.87
PVT1-201ENST00000504719 E2F8A0AVK6 867 aa26.74■■□□□ 1.87
PVT1-201ENST00000504719 PMM2O15305 246 aa26.74■■□□□ 1.87
PVT1-201ENST00000504719 RNF40O75150 1001 aa26.74■■□□□ 1.87
PVT1-201ENST00000504719 CYP17A1P05093 508 aa26.74■■□□□ 1.87
PVT1-201ENST00000504719 CCDC192P0DO97 292 aa26.74■■□□□ 1.87
PVT1-201ENST00000504719 ERCC5P28715 1186 aaPredicted RBP26.74■■□□□ 1.87
PVT1-201ENST00000504719 DMWDQ09019 674 aa26.74■■□□□ 1.87
PVT1-201ENST00000504719 CUL2Q13617 745 aa26.74■■□□□ 1.87
PVT1-201ENST00000504719 TPD52L1Q16890 204 aaPredicted RBP26.74■■□□□ 1.87
PVT1-201ENST00000504719 FBXO43Q4G163 708 aa26.74■■□□□ 1.87
PVT1-201ENST00000504719 ARHGAP17Q68EM7 881 aa26.74■■□□□ 1.87
PVT1-201ENST00000504719 TRIM59Q8IWR1 403 aa26.74■■□□□ 1.87
PVT1-201ENST00000504719 EZH1Q92800 747 aaPredicted RBP26.74■■□□□ 1.87
PVT1-201ENST00000504719 TBC1D14Q9P2M4 693 aa26.74■■□□□ 1.87
PVT1-201ENST00000504719 CFAP54Q96N23 3096 aa26.74■■□□□ 1.87
PVT1-201ENST00000504719 CHURC1-FNTBB4DL54 471 aa26.73■■□□□ 1.87
PVT1-201ENST00000504719 SCAMP3O14828 347 aaKnown RBP26.73■■□□□ 1.87
PVT1-201ENST00000504719 CYP26A1O43174 497 aa26.73■■□□□ 1.87
PVT1-201ENST00000504719 TLR5O60602 858 aa26.73■■□□□ 1.87
PVT1-201ENST00000504719 ATG13O75143 517 aa26.73■■□□□ 1.87
PVT1-201ENST00000504719 OPRD1P41143 372 aa26.73■■□□□ 1.87
PVT1-201ENST00000504719 FNTBP49356 437 aa26.73■■□□□ 1.87
PVT1-201ENST00000504719 KIF11P52732 1056 aa26.73■■□□□ 1.87
PVT1-201ENST00000504719 DHCR24Q15392 516 aa26.73■■□□□ 1.87
PVT1-201ENST00000504719 RUBCNQ92622 972 aa26.73■■□□□ 1.87
PVT1-201ENST00000504719 CNOT6LQ96LI5 555 aaKnown RBP26.73■■□□□ 1.87
PVT1-201ENST00000504719 OSER1Q9NX31 292 aa26.73■■□□□ 1.87
PVT1-201ENST00000504719 TMEM63CQ9P1W3 806 aa26.73■■□□□ 1.87
PVT1-201ENST00000504719 OTOGLQ3ZCN5 2332 aa26.72■■□□□ 1.87
PVT1-201ENST00000504719 HOXA6P31267 233 aa26.72■■□□□ 1.87
PVT1-201ENST00000504719 RHBDF2Q6PJF5 856 aa26.72■■□□□ 1.87
PVT1-201ENST00000504719 SASS6Q6UVJ0 657 aa26.72■■□□□ 1.87
PVT1-201ENST00000504719 LONP2Q86WA8 852 aa26.72■■□□□ 1.87
PVT1-201ENST00000504719 CREBRFQ8IUR6 639 aa26.72■■□□□ 1.87
PVT1-201ENST00000504719 UBXN6Q9BZV1 441 aa26.72■■□□□ 1.87
PVT1-201ENST00000504719 NACA2Q9H009 215 aa26.72■■□□□ 1.87
PVT1-201ENST00000504719 NMUR1Q9HB89 426 aa26.72■■□□□ 1.87
PVT1-201ENST00000504719 CYLDQ9NQC7 956 aa26.72■■□□□ 1.87
PVT1-201ENST00000504719 SMG5Q9UPR3 1016 aaKnown RBP26.72■■□□□ 1.87
PVT1-201ENST00000504719 SH3BP1Q9Y3L3 701 aa26.72■■□□□ 1.87
PVT1-201ENST00000504719 UTP18Q9Y5J1 556 aaKnown RBP eCLIP26.72■■□□□ 1.87
PVT1-201ENST00000504719 USP3Q9Y6I4 520 aa26.72■■□□□ 1.87
PVT1-201ENST00000504719 A0A1W2PQH9 124 aa26.71■■□□□ 1.87
PVT1-201ENST00000504719 TBX18O95935 607 aa26.71■■□□□ 1.87
PVT1-201ENST00000504719 HOXC13P31276 330 aa26.71■■□□□ 1.87
PVT1-201ENST00000504719 YWHAEP62258 255 aaKnown RBP26.71■■□□□ 1.87
PVT1-201ENST00000504719 KCNH2Q12809 1159 aa26.71■■□□□ 1.87
PVT1-201ENST00000504719 LRMPQ12912 555 aa26.71■■□□□ 1.87
PVT1-201ENST00000504719 CT47A1Q5JQC4 288 aaPredicted RBP26.71■■□□□ 1.87
PVT1-201ENST00000504719 IRF2BP1Q8IU81 584 aa26.71■■□□□ 1.87
PVT1-201ENST00000504719 UBR7Q8N806 425 aa26.71■■□□□ 1.87
PVT1-201ENST00000504719 WBP2Q969T9 261 aa26.71■■□□□ 1.87
PVT1-201ENST00000504719 OTUB2Q96DC9 234 aa26.71■■□□□ 1.87
PVT1-201ENST00000504719 KLF16Q9BXK1 252 aaPredicted RBP26.71■■□□□ 1.87
PVT1-201ENST00000504719 EP300Q09472 2414 aaPredicted RBP26.7■■□□□ 1.87
PVT1-201ENST00000504719 TBXAS1P24557 533 aaPredicted RBP26.7■■□□□ 1.86
PVT1-201ENST00000504719 ATP5C1P36542 298 aaKnown RBP26.7■■□□□ 1.86
PVT1-201ENST00000504719 CCDC186Q7Z3E2 898 aa26.7■■□□□ 1.86
PVT1-201ENST00000504719 DCLK2Q8N568 766 aa26.7■■□□□ 1.86
PVT1-201ENST00000504719 ANKRD52Q8NB46 1076 aa26.7■■□□□ 1.86
PVT1-201ENST00000504719 HINFPQ9BQA5 517 aa26.7■■□□□ 1.86
PVT1-201ENST00000504719 P4HA2O15460 535 aa26.69■■□□□ 1.86
PVT1-201ENST00000504719 AFPP02771 609 aaKnown RBP26.69■■□□□ 1.86
PVT1-201ENST00000504719 RARGP13631 454 aa26.69■■□□□ 1.86
PVT1-201ENST00000504719 HEATR6Q6AI08 1181 aaKnown RBP26.69■■□□□ 1.86
PVT1-201ENST00000504719 CAVIN1Q6NZI2 390 aaKnown RBP26.69■■□□□ 1.86
PVT1-201ENST00000504719 RPLP0P6Q8NHW5 317 aa26.69■■□□□ 1.86
PVT1-201ENST00000504719 LMO3Q8TAP4 145 aa26.69■■□□□ 1.86
PVT1-201ENST00000504719 THAP9Q9H5L6 903 aa26.69■■□□□ 1.86
PVT1-201ENST00000504719 MTPAPQ9NVV4 582 aaKnown RBP eCLIP26.69■■□□□ 1.86
PVT1-201ENST00000504719 SLC8A2Q9UPR5 921 aa26.69■■□□□ 1.86
PVT1-201ENST00000504719 GVINP1Q7Z2Y8 2422 aa26.69■■□□□ 1.86
PVT1-201ENST00000504719 HRO43593 1189 aa26.68■■□□□ 1.86
PVT1-201ENST00000504719 ADH1CP00326 375 aa26.68■■□□□ 1.86
PVT1-201ENST00000504719 IRF1P10914 325 aa26.68■■□□□ 1.86
PVT1-201ENST00000504719 CNR2P34972 360 aa26.68■■□□□ 1.86
PVT1-201ENST00000504719 PSEN1P49768 467 aa26.68■■□□□ 1.86
PVT1-201ENST00000504719 CETN1Q12798 172 aa26.68■■□□□ 1.86
PVT1-201ENST00000504719 RAB41Q5JT25 222 aa26.68■■□□□ 1.86
PVT1-201ENST00000504719 KLHDC10Q6PID8 442 aa26.68■■□□□ 1.86
PVT1-201ENST00000504719 SCD5Q86SK9 330 aa26.68■■□□□ 1.86
PVT1-201ENST00000504719 PIGZQ86VD9 579 aa26.68■■□□□ 1.86
PVT1-201ENST00000504719 WDR5BQ86VZ2 330 aa26.68■■□□□ 1.86
PVT1-201ENST00000504719 TTC30AQ86WT1 665 aa26.68■■□□□ 1.86
PVT1-201ENST00000504719 BBS7Q8IWZ6 715 aa26.68■■□□□ 1.86
PVT1-201ENST00000504719 ZNF276Q8N554 614 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms