RNA–Protein interactions for RNA: ENST00000504677.5

POLR2J3-210, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-210ENST00000504677 SSX2IPQ9Y2D8 614 aa12.49□□□□□ -0.41
POLR2J3-210ENST00000504677 INSL6Q9Y581 213 aa12.49□□□□□ -0.41
POLR2J3-210ENST00000504677 PCDHB12Q9Y5F1 795 aa12.49□□□□□ -0.41
POLR2J3-210ENST00000504677 PLXNA3P51805 1871 aa12.48□□□□□ -0.41
POLR2J3-210ENST00000504677 LRRD1A4D1F6 860 aa12.48□□□□□ -0.41
POLR2J3-210ENST00000504677 MTMR11A4FU01 709 aa12.48□□□□□ -0.41
POLR2J3-210ENST00000504677 ZNF487B1APH4 448 aa12.48□□□□□ -0.41
POLR2J3-210ENST00000504677 CAPN9O14815 690 aa12.48□□□□□ -0.41
POLR2J3-210ENST00000504677 MDM4O15151 490 aa12.48□□□□□ -0.41
POLR2J3-210ENST00000504677 PHF2O75151 1096 aa12.48□□□□□ -0.41
POLR2J3-210ENST00000504677 TJP3O95049 919 aa12.48□□□□□ -0.41
POLR2J3-210ENST00000504677 RTN3O95197 1032 aaPredicted RBP12.48□□□□□ -0.41
POLR2J3-210ENST00000504677 CYP2F1P24903 491 aa12.48□□□□□ -0.41
POLR2J3-210ENST00000504677 CHRNA3P32297 505 aa12.48□□□□□ -0.41
POLR2J3-210ENST00000504677 RDXP35241 583 aaKnown RBP12.48□□□□□ -0.41
POLR2J3-210ENST00000504677 SULT1E1P49888 294 aa12.48□□□□□ -0.41
POLR2J3-210ENST00000504677 SLC5A3P53794 718 aa12.48□□□□□ -0.41
POLR2J3-210ENST00000504677 AIF1P55008 147 aa12.48□□□□□ -0.41
POLR2J3-210ENST00000504677 RPL10AP62906 217 aaKnown RBP12.48□□□□□ -0.41
POLR2J3-210ENST00000504677 ATP11AP98196 1134 aa12.48□□□□□ -0.41
POLR2J3-210ENST00000504677 DHX34Q14147 1143 aaKnown RBP12.48□□□□□ -0.41
POLR2J3-210ENST00000504677 TAF5Q15542 800 aa12.48□□□□□ -0.41
POLR2J3-210ENST00000504677 CYP1B1Q16678 543 aa12.48□□□□□ -0.41
POLR2J3-210ENST00000504677 CDO1Q16878 200 aa12.48□□□□□ -0.41
POLR2J3-210ENST00000504677 C15orf59Q2T9L4 293 aaPredicted RBP12.48□□□□□ -0.41
POLR2J3-210ENST00000504677 TFDP3Q5H9I0 405 aa12.48□□□□□ -0.41
POLR2J3-210ENST00000504677 TMEM240Q5SV17 173 aa12.48□□□□□ -0.41
POLR2J3-210ENST00000504677 DAB2IPQ5VWQ8 1189 aa12.48□□□□□ -0.41
POLR2J3-210ENST00000504677 TPGS2Q68CL5 300 aa12.48□□□□□ -0.41
POLR2J3-210ENST00000504677 SPOCD1Q6ZMY3 1216 aa12.48□□□□□ -0.41
POLR2J3-210ENST00000504677 C16orf59Q7L2K0 433 aa12.48□□□□□ -0.41
POLR2J3-210ENST00000504677 GPRIN1Q7Z2K8 1008 aa12.48□□□□□ -0.41
POLR2J3-210ENST00000504677 MAATS1Q7Z4T9 603 aa12.48□□□□□ -0.41
POLR2J3-210ENST00000504677 PSTKQ8IV42 348 aaKnown RBP12.48□□□□□ -0.41
POLR2J3-210ENST00000504677 MAP7D3Q8IWC1 876 aa12.48□□□□□ -0.41
POLR2J3-210ENST00000504677 SCN4BQ8IWT1 228 aa12.48□□□□□ -0.41
POLR2J3-210ENST00000504677 DEFB106AQ8N104 65 aa12.48□□□□□ -0.41
POLR2J3-210ENST00000504677 NUP93Q8N1F7 819 aa12.48□□□□□ -0.41
POLR2J3-210ENST00000504677 ARFGAP1Q8N6T3 406 aa12.48□□□□□ -0.41
POLR2J3-210ENST00000504677 C12orf50Q8NA57 414 aaPredicted RBP12.48□□□□□ -0.41
POLR2J3-210ENST00000504677 FBXO22Q8NEZ5 403 aa12.48□□□□□ -0.41
POLR2J3-210ENST00000504677 NT5C3BQ969T7 300 aa12.48□□□□□ -0.41
POLR2J3-210ENST00000504677 SPATA17Q96L03 361 aa12.48□□□□□ -0.41
POLR2J3-210ENST00000504677 LBHD1Q9BQE6 289 aaPredicted RBP12.48□□□□□ -0.41
POLR2J3-210ENST00000504677 ZBED2Q9BTP6 218 aa12.48□□□□□ -0.41
POLR2J3-210ENST00000504677 AP1M1Q9BXS5 423 aa12.48□□□□□ -0.41
POLR2J3-210ENST00000504677 OSBPL8Q9BZF1 889 aa12.48□□□□□ -0.41
POLR2J3-210ENST00000504677 ZWILCHQ9H900 591 aa12.48□□□□□ -0.41
POLR2J3-210ENST00000504677 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.48□□□□□ -0.41
POLR2J3-210ENST00000504677 MAFFQ9ULX9 164 aa12.48□□□□□ -0.41
POLR2J3-210ENST00000504677 RWDD3Q9Y3V2 267 aa12.48□□□□□ -0.41
POLR2J3-210ENST00000504677 SLC4A7Q9Y6M7 1214 aa12.48□□□□□ -0.41
POLR2J3-210ENST00000504677 MYO16Q9Y6X6 1858 aa12.48□□□□□ -0.41
POLR2J3-210ENST00000504677 TNFRSF10BO14763 440 aa12.47□□□□□ -0.41
POLR2J3-210ENST00000504677 ENDOD1O94919 500 aa12.47□□□□□ -0.41
POLR2J3-210ENST00000504677 USP17L7P0C7H9 530 aa12.47□□□□□ -0.41
POLR2J3-210ENST00000504677 RHOXF2BP0C7M4 288 aa12.47□□□□□ -0.41
POLR2J3-210ENST00000504677 HAPLN1P10915 354 aaPredicted RBP12.47□□□□□ -0.41
POLR2J3-210ENST00000504677 TCF4P15884 667 aa12.47□□□□□ -0.41
POLR2J3-210ENST00000504677 IL1R2P27930 398 aa12.47□□□□□ -0.41
POLR2J3-210ENST00000504677 FNTAP49354 379 aa12.47□□□□□ -0.41
POLR2J3-210ENST00000504677 NDUFV1P49821 464 aa12.47□□□□□ -0.41
POLR2J3-210ENST00000504677 HDAC4P56524 1084 aa12.47□□□□□ -0.41
POLR2J3-210ENST00000504677 ROR1Q01973 937 aa12.47□□□□□ -0.41
POLR2J3-210ENST00000504677 KRT17Q04695 432 aa12.47□□□□□ -0.41
POLR2J3-210ENST00000504677 PDK2Q15119 407 aa12.47□□□□□ -0.41
POLR2J3-210ENST00000504677 DCAF6Q58WW2 860 aa12.47□□□□□ -0.41
POLR2J3-210ENST00000504677 WDR93Q6P2C0 686 aa12.47□□□□□ -0.41
POLR2J3-210ENST00000504677 PRSS55Q6UWB4 352 aaPredicted RBP12.47□□□□□ -0.41
POLR2J3-210ENST00000504677 BNIPLQ7Z465 357 aa12.47□□□□□ -0.41
POLR2J3-210ENST00000504677 CMASQ8NFW8 434 aaPredicted RBP12.47□□□□□ -0.41
POLR2J3-210ENST00000504677 SP7Q8TDD2 431 aaPredicted RBP12.47□□□□□ -0.41
POLR2J3-210ENST00000504677 ANKRD7Q92527 254 aa12.47□□□□□ -0.41
POLR2J3-210ENST00000504677 CLP1Q92989 425 aaKnown RBP12.47□□□□□ -0.41
POLR2J3-210ENST00000504677 PGAP3Q96FM1 320 aaPredicted RBP12.47□□□□□ -0.41
POLR2J3-210ENST00000504677 B3GALT6Q96L58 329 aa12.47□□□□□ -0.41
POLR2J3-210ENST00000504677 KRT12Q99456 494 aa12.47□□□□□ -0.41
POLR2J3-210ENST00000504677 NPY6RQ99463 290 aa12.47□□□□□ -0.41
POLR2J3-210ENST00000504677 RHOXF2Q9BQY4 288 aa12.47□□□□□ -0.41
POLR2J3-210ENST00000504677 VN1R3Q9BXE9 311 aa12.47□□□□□ -0.41
POLR2J3-210ENST00000504677 FRMD8P1Q9BZ68 369 aaPredicted RBP12.47□□□□□ -0.41
POLR2J3-210ENST00000504677 ANKZF1Q9H8Y5 726 aa12.47□□□□□ -0.41
POLR2J3-210ENST00000504677 RAB21Q9UL25 225 aa12.47□□□□□ -0.41
POLR2J3-210ENST00000504677 CDY1Q9Y6F8 540 aa12.47□□□□□ -0.41
POLR2J3-210ENST00000504677 hCG_1818297A0A087WSY0 165 aa12.46□□□□□ -0.41
POLR2J3-210ENST00000504677 YJEFN3A6XGL0 299 aa12.46□□□□□ -0.41
POLR2J3-210ENST00000504677 E7ENQ6 273 aa12.46□□□□□ -0.41
POLR2J3-210ENST00000504677 ERLIN1O75477 346 aa12.46□□□□□ -0.41
POLR2J3-210ENST00000504677 F9P00740 461 aa12.46□□□□□ -0.41
POLR2J3-210ENST00000504677 RARAP10276 462 aa12.46□□□□□ -0.41
POLR2J3-210ENST00000504677 RALAP11233 206 aa12.46□□□□□ -0.41
POLR2J3-210ENST00000504677 KDELR1P24390 212 aa12.46□□□□□ -0.41
POLR2J3-210ENST00000504677 CDKN2BP42772 138 aa12.46□□□□□ -0.41
POLR2J3-210ENST00000504677 TUFMP49411 452 aaKnown RBP12.46□□□□□ -0.41
POLR2J3-210ENST00000504677 ARPP19P56211 112 aa12.46□□□□□ -0.41
POLR2J3-210ENST00000504677 KLF1Q13351 362 aaPredicted RBP12.46□□□□□ -0.41
POLR2J3-210ENST00000504677 NAA30Q147X3 362 aaPredicted RBP12.46□□□□□ -0.41
POLR2J3-210ENST00000504677 BRD3Q15059 726 aa12.46□□□□□ -0.41
POLR2J3-210ENST00000504677 TAZQ16635 292 aa12.46□□□□□ -0.41
POLR2J3-210ENST00000504677 SMTNL2Q2TAL5 461 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms