RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 SPATA20Q8TB22 786 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 CFHR4Q92496 578 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 RAX2Q96IS3 184 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 GBP5Q96PP8 586 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 TEX13AQ9BXU3 409 aaPredicted RBP5.55□□□□□ -1.52
NIPBL-204ENST00000504430 OSBPL6Q9BZF3 934 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 TMEM206Q9H813 350 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 SMURF2Q9HAU4 748 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 ERVK-5Q9HDB9 667 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 LTB4R2Q9NPC1 389 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 ZBTB40Q9NUA8 1239 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 TCP11L1Q9NUJ3 509 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 USP36Q9P275 1121 aaKnown RBP5.55□□□□□ -1.52
NIPBL-204ENST00000504430 TBX20Q9UMR3 447 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 AURKCQ9UQB9 309 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 KCNK7Q9Y2U2 307 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 SIT1Q9Y3P8 196 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 PRAMEF22A3QJZ6 481 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 RAB27BO00194 218 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 MAGEB3O15480 346 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 CA12O43570 354 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 NMT2O60551 498 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 TPBGLP0DKB5 382 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 CD68P34810 354 aaPredicted RBP5.55□□□□□ -1.52
NIPBL-204ENST00000504430 SOX6P35712 828 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 HSD17B2P37059 387 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 PCSK7Q16549 785 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 FIGNQ5HY92 759 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 EXOSC6Q5RKV6 272 aaKnown RBP5.55□□□□□ -1.52
NIPBL-204ENST00000504430 PRAMEF18Q5VWM3 479 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 PACS1Q6VY07 963 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 CENPQQ7L2Z9 268 aaPredicted RBP5.55□□□□□ -1.52
NIPBL-204ENST00000504430 KCTD20Q7Z5Y7 419 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 CDH26Q8IXH8 852 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 OR56B2PQ8NGI1 322 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 TUBGCP3Q96CW5 907 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 CMTM3Q96MX0 182 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 PHF7Q9BWX1 381 aaPredicted RBP5.55□□□□□ -1.52
NIPBL-204ENST00000504430 MOV10L1Q9BXT6 1211 aaKnown RBP5.55□□□□□ -1.52
NIPBL-204ENST00000504430 NACA2Q9H009 215 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 RBPJLQ9UBG7 517 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 MID2Q9UJV3 735 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 ZMYND8Q9ULU4 1186 aaPredicted RBP5.55□□□□□ -1.52
NIPBL-204ENST00000504430 SLC4A4Q9Y6R1 1079 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 IFNL4K9M1U5 179 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 BIN1O00499 593 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 FOXP2O15409 715 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 PDE8BO95263 885 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 MATN4O95460 622 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 SYPP08247 313 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 EPHA8P29322 1005 aaPredicted RBP5.54□□□□□ -1.52
NIPBL-204ENST00000504430 IL12RB1P42701 662 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 MTIF2P46199 727 aaKnown RBP5.54□□□□□ -1.52
NIPBL-204ENST00000504430 VAMP2P63027 116 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 SCAPQ12770 1279 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 GRM4Q14833 912 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 TESK1Q15569 626 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 FAM187BQ17R55 369 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 BBS12Q6ZW61 710 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 ARMCX2Q7L311 632 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 FBXW8Q8N3Y1 598 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 SLC15A4Q8N697 577 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 WHAMMQ8TF30 809 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 MCRS1Q96EZ8 462 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 WDFY2Q96P53 400 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 ADI1Q9BV57 179 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 CAPS2Q9BXY5 557 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 TRIM54Q9BYV2 358 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 ERVMER34-1Q9H9K5 563 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 SELENONQ9NZV5 590 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 CALCOCO1Q9P1Z2 691 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 NOSIPQ9Y314 301 aaKnown RBP5.54□□□□□ -1.52
NIPBL-204ENST00000504430 BTBD18B2RXH4 712 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 ZC3H11AO75152 810 aaKnown RBP eCLIP5.54□□□□□ -1.52
NIPBL-204ENST00000504430 DDHD2O94830 711 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 SBK3P0C264 359 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 TNNT1P13805 278 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 MALP21145 153 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 KCNJ5P48544 419 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 LUMP51884 338 aaPredicted RBP5.54□□□□□ -1.52
NIPBL-204ENST00000504430 RPL11P62913 178 aaKnown RBP5.54□□□□□ -1.52
NIPBL-204ENST00000504430 RPP30P78346 268 aaKnown RBP5.54□□□□□ -1.52
NIPBL-204ENST00000504430 TRA2AQ13595 282 aaKnown RBP eCLIP5.54□□□□□ -1.52
NIPBL-204ENST00000504430 NEDD9Q14511 834 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 MXD4Q14582 209 aaPredicted RBP5.54□□□□□ -1.52
NIPBL-204ENST00000504430 DUOXA2Q1HG44 320 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 ATXN7L2Q5T6C5 722 aaPredicted RBP5.54□□□□□ -1.52
NIPBL-204ENST00000504430 DCAF12L1Q5VU92 463 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 TMEM57Q8N5G2 664 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 NLGN2Q8NFZ4 835 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 CLEC4DQ8WXI8 215 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 SGCDQ92629 289 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 ATP6V0A1Q93050 837 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 RMDN1Q96DB5 314 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 GCNAQ96QF7 691 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 ATXN3LQ9H3M9 355 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 NMRK1Q9NWW6 199 aa5.54□□□□□ -1.52
NIPBL-204ENST00000504430 PTRH2Q9Y3E5 179 aaKnown RBP5.54□□□□□ -1.52
NIPBL-204ENST00000504430 TERTO14746 1132 aaKnown RBP5.54□□□□□ -1.52
NIPBL-204ENST00000504430 NEMFO60524 1076 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms