RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 TFDP3Q5H9I0 405 aa8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 TEX35Q5T0J7 233 aa8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 DCAF12L1Q5VU92 463 aa8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 SND1Q7KZF4 910 aaKnown RBP eCLIP8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 MAATS1Q7Z4T9 603 aa8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 MON1AQ86VX9 555 aa8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 TMEM173Q86WV6 379 aaPredicted RBP8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 SLC13A5Q86YT5 568 aaPredicted RBP8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 SCN4BQ8IWT1 228 aa8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 NUP93Q8N1F7 819 aa8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 CCDC26Q8TAB7 109 aa8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 ZNF461Q8TAF7 563 aa8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 FAM172AQ8WUF8 416 aa8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 BCL7CQ8WUZ0 217 aaPredicted RBP8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 KHSRPQ92945 711 aaKnown RBP eCLIP8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 NT5C3BQ969T7 300 aa8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 PGAP3Q96FM1 320 aaPredicted RBP8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 CFAP57Q96MR6 1250 aa8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 SAMD11Q96NU1 681 aa8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 CDK5RAP1Q96SZ6 601 aaKnown RBP8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 FRMD8P1Q9BZ68 369 aaPredicted RBP8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 SLITRK6Q9H5Y7 841 aa8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 ABCC13Q9NSE7 274 aa8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 HCSTQ9UBK5 93 aa8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 FEZ2Q9UHY8 353 aaPredicted RBP8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 SCML2Q9UQR0 700 aa8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 CDY1Q9Y6F8 540 aa8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 CEP350Q5VT06 3117 aa8.49□□□□□ -1.05
TOPBP1-202ENST00000503338 FAM92AA1XBS5 289 aa8.49□□□□□ -1.05
TOPBP1-202ENST00000503338 PDE2AO00408 941 aaPredicted RBP8.49□□□□□ -1.05
TOPBP1-202ENST00000503338 TNFRSF10BO14763 440 aa8.49□□□□□ -1.05
TOPBP1-202ENST00000503338 GRAP2O75791 330 aa8.49□□□□□ -1.05
TOPBP1-202ENST00000503338 FGF18O76093 207 aa8.49□□□□□ -1.05
TOPBP1-202ENST00000503338 ENDOD1O94919 500 aa8.49□□□□□ -1.05
TOPBP1-202ENST00000503338 C1RP00736 705 aa8.49□□□□□ -1.05
TOPBP1-202ENST00000503338 KRT1P04264 644 aa8.49□□□□□ -1.05
TOPBP1-202ENST00000503338 RB1P06400 928 aa8.49□□□□□ -1.05
TOPBP1-202ENST00000503338 OR4Q2P0C623 313 aa8.49□□□□□ -1.05
TOPBP1-202ENST00000503338 USP17L7P0C7H9 530 aa8.49□□□□□ -1.05
TOPBP1-202ENST00000503338 CTSAP10619 480 aa8.49□□□□□ -1.05
TOPBP1-202ENST00000503338 NCAM1P13591 858 aa8.49□□□□□ -1.05
TOPBP1-202ENST00000503338 ATF2P15336 505 aa8.49□□□□□ -1.05
TOPBP1-202ENST00000503338 CHRNA3P32297 505 aa8.49□□□□□ -1.05
TOPBP1-202ENST00000503338 ELF1P32519 619 aa8.49□□□□□ -1.05
TOPBP1-202ENST00000503338 FNTAP49354 379 aa8.49□□□□□ -1.05
TOPBP1-202ENST00000503338 ARPP19P56211 112 aa8.49□□□□□ -1.05
TOPBP1-202ENST00000503338 TAS2R40P59535 323 aa8.49□□□□□ -1.05
TOPBP1-202ENST00000503338 ROR1Q01973 937 aa8.49□□□□□ -1.05
TOPBP1-202ENST00000503338 PLD1Q13393 1074 aa8.49□□□□□ -1.05
TOPBP1-202ENST00000503338 RAB33AQ14088 237 aa8.49□□□□□ -1.05
TOPBP1-202ENST00000503338 CCDC142Q17RM4 750 aa8.49□□□□□ -1.05
TOPBP1-202ENST00000503338 ARL13BQ3SXY8 428 aa8.49□□□□□ -1.05
TOPBP1-202ENST00000503338 MGAT5BQ3V5L5 792 aa8.49□□□□□ -1.05
TOPBP1-202ENST00000503338 DCAF6Q58WW2 860 aa8.49□□□□□ -1.05
TOPBP1-202ENST00000503338 ACBD5Q5T8D3 534 aaPredicted RBP8.49□□□□□ -1.05
TOPBP1-202ENST00000503338 RASIP1Q5U651 963 aa8.49□□□□□ -1.05
TOPBP1-202ENST00000503338 DENND5BQ6ZUT9 1274 aa8.49□□□□□ -1.05
TOPBP1-202ENST00000503338 RTL10Q7L3V2 364 aa8.49□□□□□ -1.05
TOPBP1-202ENST00000503338 TAS1R1Q7RTX1 841 aa8.49□□□□□ -1.05
TOPBP1-202ENST00000503338 TADA2BQ86TJ2 420 aa8.49□□□□□ -1.05
TOPBP1-202ENST00000503338 CCDC50Q8IVM0 306 aa8.49□□□□□ -1.05
TOPBP1-202ENST00000503338 DEFB106AQ8N104 65 aa8.49□□□□□ -1.05
TOPBP1-202ENST00000503338 VPS52Q8N1B4 723 aa8.49□□□□□ -1.05
TOPBP1-202ENST00000503338 TTC13Q8NBP0 860 aa8.49□□□□□ -1.05
TOPBP1-202ENST00000503338 ATAD1Q8NBU5 361 aa8.49□□□□□ -1.05
TOPBP1-202ENST00000503338 KCTD6Q8NC69 237 aa8.49□□□□□ -1.05
TOPBP1-202ENST00000503338 PDZD8Q8NEN9 1154 aa8.49□□□□□ -1.05
TOPBP1-202ENST00000503338 CMASQ8NFW8 434 aaPredicted RBP8.49□□□□□ -1.05
TOPBP1-202ENST00000503338 CLEC4CQ8WTT0 213 aa8.49□□□□□ -1.05
TOPBP1-202ENST00000503338 OVCA2Q8WZ82 227 aa8.49□□□□□ -1.05
TOPBP1-202ENST00000503338 PIWIL1Q96J94 861 aaKnown RBP8.49□□□□□ -1.05
TOPBP1-202ENST00000503338 MS4A14Q96JA4 679 aa8.49□□□□□ -1.05
TOPBP1-202ENST00000503338 NPY6RQ99463 290 aa8.49□□□□□ -1.05
TOPBP1-202ENST00000503338 C11orf84Q9BUA3 381 aaPredicted RBP8.49□□□□□ -1.05
TOPBP1-202ENST00000503338 OSBPL8Q9BZF1 889 aa8.49□□□□□ -1.05
TOPBP1-202ENST00000503338 RXFP1Q9HBX9 757 aa8.49□□□□□ -1.05
TOPBP1-202ENST00000503338 NGRNQ9NPE2 291 aaKnown RBP8.49□□□□□ -1.05
TOPBP1-202ENST00000503338 OLA1Q9NTK5 396 aaKnown RBP8.49□□□□□ -1.05
TOPBP1-202ENST00000503338 ARGLU1Q9NWB6 273 aaPredicted RBP8.49□□□□□ -1.05
TOPBP1-202ENST00000503338 IL37Q9NZH6 218 aa8.49□□□□□ -1.05
TOPBP1-202ENST00000503338 BRCA2P51587 3418 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 WDR27A2RRH5 827 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 LRRD1A4D1F6 860 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 YJEFN3A6XGL0 299 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 E7ENQ6 273 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 C5orf67F2Z3F1 127 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 LPXNO60711 386 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 ZNF189O75820 626 aaPredicted RBP8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 ABLIM3O94929 683 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 CSH1P0DML2 217 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 CSH2P0DML3 217 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 RALAP11233 206 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 ZFXP17010 805 aaPredicted RBP8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 SYN1P17600 705 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 KDELR1P24390 212 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 YWHAQP27348 245 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 OR1D2P34982 312 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 GJC1P36383 396 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 BMPR1AP36894 532 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms