RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 OGFOD2Q6N063 350 aa6.01□□□□□ -1.45
HMGB1P3-201ENST00000502802 CLEC9AQ6UXN8 241 aa6.01□□□□□ -1.45
HMGB1P3-201ENST00000502802 DSTYKQ6XUX3 929 aa6.01□□□□□ -1.45
HMGB1P3-201ENST00000502802 TRABD2AQ86V40 505 aa6.01□□□□□ -1.45
HMGB1P3-201ENST00000502802 FSTL5Q8N475 847 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P3-201ENST00000502802 OSCP1Q8WVF1 389 aa6.01□□□□□ -1.45
HMGB1P3-201ENST00000502802 HMGB4Q8WW32 186 aa6.01□□□□□ -1.45
HMGB1P3-201ENST00000502802 TMEM125Q96AQ2 219 aa6.01□□□□□ -1.45
HMGB1P3-201ENST00000502802 FAM136AQ96C01 138 aa6.01□□□□□ -1.45
HMGB1P3-201ENST00000502802 C17orf80Q9BSJ5 609 aa6.01□□□□□ -1.45
HMGB1P3-201ENST00000502802 ALG13Q9NP73 1137 aaKnown RBP6.01□□□□□ -1.45
HMGB1P3-201ENST00000502802 TRPM5Q9NZQ8 1165 aa6.01□□□□□ -1.45
HMGB1P3-201ENST00000502802 PI4KBQ9UBF8 816 aa6.01□□□□□ -1.45
HMGB1P3-201ENST00000502802 SLC27A6Q9Y2P4 619 aa6.01□□□□□ -1.45
HMGB1P3-201ENST00000502802 RRP7AQ9Y3A4 280 aaKnown RBP6.01□□□□□ -1.45
HMGB1P3-201ENST00000502802 SNX14Q9Y5W7 946 aa6.01□□□□□ -1.45
HMGB1P3-201ENST00000502802 FPGT-TNNI3KV9GXZ4 949 aa6.01□□□□□ -1.45
HMGB1P3-201ENST00000502802 PRSS47A8MTI9 375 aa6□□□□□ -1.45
HMGB1P3-201ENST00000502802 TRIM24O15164 1050 aa6□□□□□ -1.45
HMGB1P3-201ENST00000502802 GPR42O15529 346 aa6□□□□□ -1.45
HMGB1P3-201ENST00000502802 RNASEH2AO75792 299 aaKnown RBP6□□□□□ -1.45
HMGB1P3-201ENST00000502802 RECQL4O94761 1208 aa6□□□□□ -1.45
HMGB1P3-201ENST00000502802 LARGE1O95461 756 aa6□□□□□ -1.45
HMGB1P3-201ENST00000502802 CER1O95813 267 aa6□□□□□ -1.45
HMGB1P3-201ENST00000502802 PLATP00750 562 aa6□□□□□ -1.45
HMGB1P3-201ENST00000502802 TFRCP02786 760 aaKnown RBP6□□□□□ -1.45
HMGB1P3-201ENST00000502802 CNPP09543 421 aaKnown RBP6□□□□□ -1.45
HMGB1P3-201ENST00000502802 COMTP21964 271 aa6□□□□□ -1.45
HMGB1P3-201ENST00000502802 YY1P25490 414 aa6□□□□□ -1.45
HMGB1P3-201ENST00000502802 HTR7P34969 479 aa6□□□□□ -1.45
HMGB1P3-201ENST00000502802 MTHFSP49914 203 aa6□□□□□ -1.45
HMGB1P3-201ENST00000502802 SCNN1GP51170 649 aa6□□□□□ -1.45
HMGB1P3-201ENST00000502802 TIRAPP58753 221 aa6□□□□□ -1.45
HMGB1P3-201ENST00000502802 CXADRP78310 365 aa6□□□□□ -1.45
HMGB1P3-201ENST00000502802 ACOX1Q15067 660 aa6□□□□□ -1.45
HMGB1P3-201ENST00000502802 ANKRD1Q15327 319 aa6□□□□□ -1.45
HMGB1P3-201ENST00000502802 CYP2A13Q16696 494 aa6□□□□□ -1.45
HMGB1P3-201ENST00000502802 GALNTL6Q49A17 601 aa6□□□□□ -1.45
HMGB1P3-201ENST00000502802 TBC1D10BQ4KMP7 808 aaPredicted RBP6□□□□□ -1.45
HMGB1P3-201ENST00000502802 MSANTD2Q6P1R3 559 aa6□□□□□ -1.45
HMGB1P3-201ENST00000502802 MAMDC4Q6UXC1 1216 aa6□□□□□ -1.45
HMGB1P3-201ENST00000502802 SYT13Q7L8C5 426 aa6□□□□□ -1.45
HMGB1P3-201ENST00000502802 CIR1Q86X95 450 aaPredicted RBP6□□□□□ -1.45
HMGB1P3-201ENST00000502802 IZUMO1Q8IYV9 350 aa6□□□□□ -1.45
HMGB1P3-201ENST00000502802 ZNF808Q8N4W9 903 aaPredicted RBP6□□□□□ -1.45
HMGB1P3-201ENST00000502802 POU5F2Q8N7G0 328 aa6□□□□□ -1.45
HMGB1P3-201ENST00000502802 ATG4AQ8WYN0 398 aa6□□□□□ -1.45
HMGB1P3-201ENST00000502802 RRP36Q96EU6 259 aaKnown RBP6□□□□□ -1.45
HMGB1P3-201ENST00000502802 FAM89AQ96GI7 184 aa6□□□□□ -1.45
HMGB1P3-201ENST00000502802 HAPLN3Q96S86 360 aa6□□□□□ -1.45
HMGB1P3-201ENST00000502802 VN1R3Q9BXE9 311 aa6□□□□□ -1.45
HMGB1P3-201ENST00000502802 TEX101Q9BY14 249 aa6□□□□□ -1.45
HMGB1P3-201ENST00000502802 AMBRA1Q9C0C7 1298 aa6□□□□□ -1.45
HMGB1P3-201ENST00000502802 OSBPL5Q9H0X9 879 aaPredicted RBP6□□□□□ -1.45
HMGB1P3-201ENST00000502802 PREBQ9HCU5 417 aa6□□□□□ -1.45
HMGB1P3-201ENST00000502802 IRAK4Q9NWZ3 460 aa6□□□□□ -1.45
HMGB1P3-201ENST00000502802 KCND3Q9UK17 655 aa6□□□□□ -1.45
HMGB1P3-201ENST00000502802 RIMKLBQ9ULI2 386 aa6□□□□□ -1.45
HMGB1P3-201ENST00000502802 SORCS3Q9UPU3 1222 aa6□□□□□ -1.45
HMGB1P3-201ENST00000502802 SETD1BQ9UPS6 1966 aaKnown RBP5.99□□□□□ -1.45
HMGB1P3-201ENST00000502802 ZAR1LA6NP61 321 aa5.99□□□□□ -1.45
HMGB1P3-201ENST00000502802 KIF28PB7ZC32 967 aa5.99□□□□□ -1.45
HMGB1P3-201ENST00000502802 CBFA2T3O75081 653 aa5.99□□□□□ -1.45
HMGB1P3-201ENST00000502802 TBX18O95935 607 aa5.99□□□□□ -1.45
HMGB1P3-201ENST00000502802 CD19P15391 556 aa5.99□□□□□ -1.45
HMGB1P3-201ENST00000502802 GATA3P23771 443 aa5.99□□□□□ -1.45
HMGB1P3-201ENST00000502802 HIBADHP31937 336 aaKnown RBP5.99□□□□□ -1.45
HMGB1P3-201ENST00000502802 MAGEA10P43363 369 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P3-201ENST00000502802 RBM5P52756 815 aaKnown RBP eCLIP5.99□□□□□ -1.45
HMGB1P3-201ENST00000502802 SF3A3Q12874 501 aaKnown RBP eCLIP5.99□□□□□ -1.45
HMGB1P3-201ENST00000502802 GEN1Q17RS7 908 aa5.99□□□□□ -1.45
HMGB1P3-201ENST00000502802 P3H1Q32P28 736 aa5.99□□□□□ -1.45
HMGB1P3-201ENST00000502802 SPDYE7PQ495Y7 208 aa5.99□□□□□ -1.45
HMGB1P3-201ENST00000502802 CFAP161Q6P656 301 aa5.99□□□□□ -1.45
HMGB1P3-201ENST00000502802 C4orf50Q6ZRC1 276 aa5.99□□□□□ -1.45
HMGB1P3-201ENST00000502802 Q6ZSN1 163 aa5.99□□□□□ -1.45
HMGB1P3-201ENST00000502802 SYNE4Q8N205 404 aa5.99□□□□□ -1.45
HMGB1P3-201ENST00000502802 TCP11L2Q8N4U5 519 aa5.99□□□□□ -1.45
HMGB1P3-201ENST00000502802 C11orf44Q8N8P7 122 aa5.99□□□□□ -1.45
HMGB1P3-201ENST00000502802 USP38Q8NB14 1042 aa5.99□□□□□ -1.45
HMGB1P3-201ENST00000502802 NACC2Q96BF6 587 aa5.99□□□□□ -1.45
HMGB1P3-201ENST00000502802 ZBTB10Q96DT7 871 aa5.99□□□□□ -1.45
HMGB1P3-201ENST00000502802 RNF31Q96EP0 1072 aa5.99□□□□□ -1.45
HMGB1P3-201ENST00000502802 BOD1Q96IK1 185 aa5.99□□□□□ -1.45
HMGB1P3-201ENST00000502802 NEUROD6Q96NK8 337 aa5.99□□□□□ -1.45
HMGB1P3-201ENST00000502802 REEP2Q9BRK0 252 aa5.99□□□□□ -1.45
HMGB1P3-201ENST00000502802 GPR63Q9BZJ6 419 aa5.99□□□□□ -1.45
HMGB1P3-201ENST00000502802 BLOC1S4Q9NUP1 217 aa5.99□□□□□ -1.45
HMGB1P3-201ENST00000502802 LIN7CQ9NUP9 197 aaKnown RBP5.99□□□□□ -1.45
HMGB1P3-201ENST00000502802 TMEM74BQ9NUR3 256 aa5.99□□□□□ -1.45
HMGB1P3-201ENST00000502802 STEAP1Q9UHE8 339 aa5.99□□□□□ -1.45
HMGB1P3-201ENST00000502802 RNF114Q9Y508 228 aa5.99□□□□□ -1.45
HMGB1P3-201ENST00000502802 NOX1Q9Y5S8 564 aa5.99□□□□□ -1.45
HMGB1P3-201ENST00000502802 DYTNA2CJ06 578 aa5.98□□□□□ -1.45
HMGB1P3-201ENST00000502802 FAM90A20PA6NIJ5 464 aa5.98□□□□□ -1.45
HMGB1P3-201ENST00000502802 GRXCR1A8MXD5 290 aa5.98□□□□□ -1.45
HMGB1P3-201ENST00000502802 AHRRA9YTQ3 701 aa5.98□□□□□ -1.45
HMGB1P3-201ENST00000502802 WDR47O94967 919 aa5.98□□□□□ -1.45
HMGB1P3-201ENST00000502802 SCAF4O95104 1147 aaKnown RBP5.98□□□□□ -1.45
HMGB1P3-201ENST00000502802 DDX58O95786 925 aaKnown RBP5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms