RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 CCNB1P14635 433 aa17.25■□□□□ 0.35
VCAN-204ENST00000502527 ZNF200P98182 395 aaPredicted RBP17.25■□□□□ 0.35
VCAN-204ENST00000502527 MTM1Q13496 603 aa17.25■□□□□ 0.35
VCAN-204ENST00000502527 ASRGL1Q7L266 308 aa17.25■□□□□ 0.35
VCAN-204ENST00000502527 IGDCC3Q8IVU1 814 aa17.25■□□□□ 0.35
VCAN-204ENST00000502527 BANPQ8N9N5 519 aa17.25■□□□□ 0.35
VCAN-204ENST00000502527 SLC35F5Q8WV83 523 aa17.25■□□□□ 0.35
VCAN-204ENST00000502527 SLC10A4Q96EP9 437 aa17.25■□□□□ 0.35
VCAN-204ENST00000502527 ARHGEF3Q9NR81 526 aa17.25■□□□□ 0.35
VCAN-204ENST00000502527 RAB6BQ9NRW1 208 aa17.25■□□□□ 0.35
VCAN-204ENST00000502527 TXLNGQ9NUQ3 528 aa17.25■□□□□ 0.35
VCAN-204ENST00000502527 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.25■□□□□ 0.35
VCAN-204ENST00000502527 TCRBV9S1A1TA0A576 114 aa17.25■□□□□ 0.35
VCAN-204ENST00000502527 MDM4O15151 490 aa17.25■□□□□ 0.35
VCAN-204ENST00000502527 DCTN3O75935 186 aa17.25■□□□□ 0.35
VCAN-204ENST00000502527 SNAI1O95863 264 aaPredicted RBP17.25■□□□□ 0.35
VCAN-204ENST00000502527 SLC9A4Q6AI14 798 aa17.25■□□□□ 0.35
VCAN-204ENST00000502527 SLC27A1Q6PCB7 646 aa17.25■□□□□ 0.35
VCAN-204ENST00000502527 UNC93AQ86WB7 457 aa17.25■□□□□ 0.35
VCAN-204ENST00000502527 PQLC3Q8N755 202 aa17.25■□□□□ 0.35
VCAN-204ENST00000502527 LRRC52Q8N7C0 313 aa17.25■□□□□ 0.35
VCAN-204ENST00000502527 BEST2Q8NFU1 509 aa17.25■□□□□ 0.35
VCAN-204ENST00000502527 SNX27Q96L92 541 aa17.25■□□□□ 0.35
VCAN-204ENST00000502527 ZNF670Q9BS34 389 aa17.25■□□□□ 0.35
VCAN-204ENST00000502527 FAM49BQ9NUQ9 324 aa17.25■□□□□ 0.35
VCAN-204ENST00000502527 GPATCH2LQ9NWQ4 482 aa17.25■□□□□ 0.35
VCAN-204ENST00000502527 HEY1Q9Y5J3 304 aa17.25■□□□□ 0.35
VCAN-204ENST00000502527 BCLAF3A2AJT9 711 aaKnown RBP17.24■□□□□ 0.35
VCAN-204ENST00000502527 ZNF487B1APH4 448 aa17.24■□□□□ 0.35
VCAN-204ENST00000502527 KBTBD13C9JR72 458 aa17.24■□□□□ 0.35
VCAN-204ENST00000502527 HGSO14964 777 aaPredicted RBP17.24■□□□□ 0.35
VCAN-204ENST00000502527 PIAS1O75925 651 aa17.24■□□□□ 0.35
VCAN-204ENST00000502527 UNC5CO95185 931 aa17.24■□□□□ 0.35
VCAN-204ENST00000502527 ZBED1O96006 694 aa17.24■□□□□ 0.35
VCAN-204ENST00000502527 HOXD8P13378 290 aaPredicted RBP17.24■□□□□ 0.35
VCAN-204ENST00000502527 ALADP13716 330 aa17.24■□□□□ 0.35
VCAN-204ENST00000502527 YWHAGP61981 247 aaKnown RBP eCLIP17.24■□□□□ 0.35
VCAN-204ENST00000502527 CDC42EP1Q00587 391 aa17.24■□□□□ 0.35
VCAN-204ENST00000502527 KIZQ2M2Z5 673 aa17.24■□□□□ 0.35
VCAN-204ENST00000502527 C4orf22Q6V702 233 aa17.24■□□□□ 0.35
VCAN-204ENST00000502527 SCUBE3Q8IX30 993 aa17.24■□□□□ 0.35
VCAN-204ENST00000502527 TCP10LQ8TDR4 215 aa17.24■□□□□ 0.35
VCAN-204ENST00000502527 SLC44A1Q8WWI5 657 aa17.24■□□□□ 0.35
VCAN-204ENST00000502527 KHSRPQ92945 711 aaKnown RBP eCLIP17.24■□□□□ 0.35
VCAN-204ENST00000502527 LRRC37BQ96QE4 947 aa17.24■□□□□ 0.35
VCAN-204ENST00000502527 SNRNP25Q9BV90 132 aaKnown RBP17.24■□□□□ 0.35
VCAN-204ENST00000502527 GCOM2Q9BZD3 368 aaPredicted RBP17.24■□□□□ 0.35
VCAN-204ENST00000502527 KLC2Q9H0B6 622 aa17.24■□□□□ 0.35
VCAN-204ENST00000502527 VPS11Q9H270 941 aa17.24■□□□□ 0.35
VCAN-204ENST00000502527 SNTG2Q9NY99 539 aa17.24■□□□□ 0.35
VCAN-204ENST00000502527 PDHXO00330 501 aa17.24■□□□□ 0.35
VCAN-204ENST00000502527 PAPSS1O43252 624 aaPredicted RBP17.24■□□□□ 0.35
VCAN-204ENST00000502527 MMP3P08254 477 aa17.24■□□□□ 0.35
VCAN-204ENST00000502527 INHBAP08476 426 aa17.24■□□□□ 0.35
VCAN-204ENST00000502527 ADRA1DP25100 572 aa17.24■□□□□ 0.35
VCAN-204ENST00000502527 HOXA11P31270 313 aaPredicted RBP17.24■□□□□ 0.35
VCAN-204ENST00000502527 EPHX2P34913 555 aa17.24■□□□□ 0.35
VCAN-204ENST00000502527 PTK7Q13308 1070 aa17.24■□□□□ 0.35
VCAN-204ENST00000502527 ZBTB6Q15916 424 aa17.24■□□□□ 0.35
VCAN-204ENST00000502527 DGKDQ16760 1214 aa17.24■□□□□ 0.35
VCAN-204ENST00000502527 KBTBD12Q3ZCT8 623 aa17.24■□□□□ 0.35
VCAN-204ENST00000502527 DUSP28Q4G0W2 176 aa17.24■□□□□ 0.35
VCAN-204ENST00000502527 PREPLQ4J6C6 727 aaPredicted RBP17.24■□□□□ 0.35
VCAN-204ENST00000502527 FYB2Q5VWT5 728 aa17.24■□□□□ 0.35
VCAN-204ENST00000502527 CATSPER4Q7RTX7 472 aa17.24■□□□□ 0.35
VCAN-204ENST00000502527 CEP57Q86XR8 500 aa17.24■□□□□ 0.35
VCAN-204ENST00000502527 ANKLE1Q8NAG6 615 aa17.24■□□□□ 0.35
VCAN-204ENST00000502527 PCDH19Q8TAB3 1148 aa17.24■□□□□ 0.35
VCAN-204ENST00000502527 THOC1Q96FV9 657 aaKnown RBP17.24■□□□□ 0.35
VCAN-204ENST00000502527 ZMAT2Q96NC0 199 aaKnown RBP17.24■□□□□ 0.35
VCAN-204ENST00000502527 MYLK2Q9H1R3 596 aa17.24■□□□□ 0.35
VCAN-204ENST00000502527 ADAMTS10Q9H324 1103 aa17.24■□□□□ 0.35
VCAN-204ENST00000502527 PNPLA8Q9NP80 782 aa17.24■□□□□ 0.35
VCAN-204ENST00000502527 RRN3P2A6NIE6 340 aa17.23■□□□□ 0.35
VCAN-204ENST00000502527 SMPD1P17405 629 aa17.23■□□□□ 0.35
VCAN-204ENST00000502527 RBL1P28749 1068 aa17.23■□□□□ 0.35
VCAN-204ENST00000502527 WLSQ5T9L3 541 aa17.23■□□□□ 0.35
VCAN-204ENST00000502527 ARHGAP17Q68EM7 881 aa17.23■□□□□ 0.35
VCAN-204ENST00000502527 OTOAQ7RTW8 1153 aa17.23■□□□□ 0.35
VCAN-204ENST00000502527 OR6J1Q8NGC5 347 aa17.23■□□□□ 0.35
VCAN-204ENST00000502527 OR6B3Q8NGW1 331 aa17.23■□□□□ 0.35
VCAN-204ENST00000502527 GOLGA8RI6L899 631 aa17.22■□□□□ 0.35
VCAN-204ENST00000502527 PPEF2O14830 753 aa17.22■□□□□ 0.35
VCAN-204ENST00000502527 MAGEA6P43360 314 aa17.22■□□□□ 0.35
VCAN-204ENST00000502527 PTPN9P43378 593 aa17.22■□□□□ 0.35
VCAN-204ENST00000502527 CA9Q16790 459 aa17.22■□□□□ 0.35
VCAN-204ENST00000502527 DPY19L2Q6NUT2 758 aa17.22■□□□□ 0.35
VCAN-204ENST00000502527 CCDC91Q7Z6B0 441 aa17.22■□□□□ 0.35
VCAN-204ENST00000502527 DPP9Q86TI2 863 aa17.22■□□□□ 0.35
VCAN-204ENST00000502527 CDKL3Q8IVW4 592 aaPredicted RBP17.22■□□□□ 0.35
VCAN-204ENST00000502527 KIF2BQ8N4N8 673 aa17.22■□□□□ 0.35
VCAN-204ENST00000502527 ZNF398Q8TD17 642 aa17.22■□□□□ 0.35
VCAN-204ENST00000502527 ERP27Q96DN0 273 aa17.22■□□□□ 0.35
VCAN-204ENST00000502527 L3MBTL3Q96JM7 780 aaPredicted RBP17.22■□□□□ 0.35
VCAN-204ENST00000502527 CXCL16Q9H2A7 254 aa17.22■□□□□ 0.35
VCAN-204ENST00000502527 CYLDQ9NQC7 956 aa17.22■□□□□ 0.35
VCAN-204ENST00000502527 ETNK2Q9NVF9 386 aa17.22■□□□□ 0.35
VCAN-204ENST00000502527 TUBGCP4Q9UGJ1 667 aa17.22■□□□□ 0.35
VCAN-204ENST00000502527 GINS2Q9Y248 185 aa17.22■□□□□ 0.35
VCAN-204ENST00000502527 CHKBQ9Y259 395 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms