RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 PXKQ7Z7A4 578 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 GALNT7Q86SF2 657 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 PRPF39Q86UA1 669 aaKnown RBP4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 MICU3Q86XE3 530 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 GATAD2AQ86YP4 633 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 ARMC8Q8IUR7 673 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 GLB1L2Q8IW92 636 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 SLC44A2Q8IWA5 706 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 ZFPM1Q8IX07 1006 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 SP8Q8IXZ3 490 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 DIS3L2Q8IYB7 885 aaKnown RBP4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 TAGAPQ8N103 731 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 VGLL2Q8N8G2 317 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 CDYL2Q8N8U2 506 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 TRIML1Q8N9V2 468 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 GLB1L3Q8NCI6 653 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 CCDC150Q8NCX0 1101 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 OR6Y1Q8NGX8 325 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 PPP1R14CQ8TAE6 165 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 IGDCC4Q8TDY8 1250 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 FAM120BQ96EK7 910 aaKnown RBP4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 FAM167AQ96KS9 214 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 MRGPRX4Q96LA9 322 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 TSGA13Q96PP4 275 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 WRNIP1Q96S55 665 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 FDXACB1Q9BRP7 624 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 NOL10Q9BSC4 688 aaKnown RBP4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 PI4K2AQ9BTU6 479 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 CDK19Q9BWU1 502 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 MAGEB5Q9BZ81 275 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 CHST8Q9H2A9 424 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 NDST4Q9H3R1 872 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 MTG2Q9H4K7 406 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 SLC39A2Q9NP94 309 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 PRDM8Q9NQV8 689 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 MBNL3Q9NUK0 354 aaKnown RBP4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 TDP1Q9NUW8 608 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 SMG5Q9UPR3 1016 aaKnown RBP4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 MTO1Q9Y2Z2 717 aaKnown RBP4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 PCDHB6Q9Y5E3 794 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 UTRNP46939 3433 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 CENPJQ9HC77 1338 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 MARF1Q9Y4F3 1742 aaKnown RBP4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 EIF3AQ14152 1382 aaKnown RBP4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 SLIT3O75094 1523 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 USP54Q70EL1 1684 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 KIAA1324LA8MWY0 1029 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 TMEM233B4DJY2 109 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 BIN1O00499 593 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 VILLO15195 856 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 SRGAP2O75044 1071 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 PLATP00750 562 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 CYP2C8P10632 490 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 KRT10P13645 584 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 MALP21145 153 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 ARL3P36405 182 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 PEX19P40855 299 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 MSH2P43246 934 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 RGS3P49796 1198 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 EVCP57679 992 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 PSMC6P62333 389 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 UBXN2AP68543 259 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 IL1RL1Q01638 556 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 SEMA3AQ14563 771 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 KCNB1Q14721 858 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 COG2Q14746 738 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 PARP10Q53GL7 1025 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 KRTCAP3Q53RY4 240 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 METTL24Q5JXM2 366 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 TMC5Q6UXY8 1006 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 DPP8Q6V1X1 898 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 ATF7IPQ6VMQ6 1270 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 KANSL1Q7Z3B3 1105 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 KRT28Q7Z3Y7 464 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 ANKRD13BQ86YJ7 626 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 RPAP2Q8IXW5 612 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 ZNF619Q8N2I2 560 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 C17orf53Q8N3J3 647 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 GALNT4Q8N4A0 578 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 TMEM57Q8N5G2 664 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 DCBLD1Q8N8Z6 715 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 LSM14AQ8ND56 463 aaKnown RBP4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 OR6B3Q8NGW1 331 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 CPT1CQ8TCG5 803 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 GAB3Q8WWW8 586 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 CFHR4Q92496 578 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 FEM1CQ96JP0 617 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 SNX27Q96L92 541 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 NOX5Q96PH1 765 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 TMEM209Q96SK2 561 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 C1orf43Q9BWL3 253 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 CARD11Q9BXL7 1154 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 EDEM3Q9BZQ6 932 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 TWSG1Q9GZX9 223 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 PDCL3Q9H2J4 239 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 DEF6Q9H4E7 631 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 BRF2Q9HAW0 419 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 CYP4F11Q9HBI6 524 aa4.68□□□□□ -1.66
HMGB1P21-201ENST00000502313 PCDH18Q9HCL0 1135 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms