RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 GJB3O75712 270 aa12.41□□□□□ -0.42
CDK9-205ENST00000498339 CLSTN1O94985 981 aa12.41□□□□□ -0.42
CDK9-205ENST00000498339 GCNT3O95395 438 aa12.41□□□□□ -0.42
CDK9-205ENST00000498339 APC2O95996 2303 aa12.41□□□□□ -0.42
CDK9-205ENST00000498339 LDHAP00338 332 aaKnown RBP12.41□□□□□ -0.42
CDK9-205ENST00000498339 TNNC2P02585 160 aa12.41□□□□□ -0.42
CDK9-205ENST00000498339 SLCO6A1Q86UG4 719 aa12.41□□□□□ -0.42
CDK9-205ENST00000498339 ETFBKMTQ8IXQ9 262 aa12.41□□□□□ -0.42
CDK9-205ENST00000498339 ZCCHC9Q8N567 271 aaKnown RBP12.41□□□□□ -0.42
CDK9-205ENST00000498339 GLIS3Q8NEA6 775 aa12.41□□□□□ -0.42
CDK9-205ENST00000498339 KBTBD7Q8WVZ9 684 aa12.41□□□□□ -0.42
CDK9-205ENST00000498339 FBXO32Q969P5 355 aa12.41□□□□□ -0.42
CDK9-205ENST00000498339 OTUB2Q96DC9 234 aa12.41□□□□□ -0.42
CDK9-205ENST00000498339 DCBLD2Q96PD2 775 aa12.41□□□□□ -0.42
CDK9-205ENST00000498339 ZDHHC5Q9C0B5 715 aa12.41□□□□□ -0.42
CDK9-205ENST00000498339 SNX25Q9H3E2 840 aa12.41□□□□□ -0.42
CDK9-205ENST00000498339 ST6GALNAC4Q9H4F1 302 aa12.41□□□□□ -0.42
CDK9-205ENST00000498339 PCIF1Q9H4Z3 704 aa12.41□□□□□ -0.42
CDK9-205ENST00000498339 PRDM16Q9HAZ2 1276 aa12.41□□□□□ -0.42
CDK9-205ENST00000498339 PDE11AQ9HCR9 933 aa12.41□□□□□ -0.42
CDK9-205ENST00000498339 SPHK2Q9NRA0 654 aa12.41□□□□□ -0.42
CDK9-205ENST00000498339 SIX4Q9UIU6 781 aa12.41□□□□□ -0.42
CDK9-205ENST00000498339 PCOLCE2Q9UKZ9 415 aa12.41□□□□□ -0.42
CDK9-205ENST00000498339 SETXQ7Z333 2677 aaKnown RBP12.41□□□□□ -0.42
CDK9-205ENST00000498339 GOLGA4Q13439 2230 aaKnown RBP12.41□□□□□ -0.42
CDK9-205ENST00000498339 A0A1B0GTW7 788 aa12.4□□□□□ -0.42
CDK9-205ENST00000498339 A0A1W2PQF6 199 aa12.4□□□□□ -0.42
CDK9-205ENST00000498339 NEDD8-MDP1E9PL57 170 aa12.4□□□□□ -0.42
CDK9-205ENST00000498339 H3BQV1 296 aa12.4□□□□□ -0.42
CDK9-205ENST00000498339 TRIM24O15164 1050 aa12.4□□□□□ -0.42
CDK9-205ENST00000498339 CER1O95813 267 aa12.4□□□□□ -0.42
CDK9-205ENST00000498339 KCNA1Q09470 495 aa12.4□□□□□ -0.42
CDK9-205ENST00000498339 C19orf57Q0VDD7 668 aa12.4□□□□□ -0.42
CDK9-205ENST00000498339 CCDC157Q569K6 752 aa12.4□□□□□ -0.42
CDK9-205ENST00000498339 L1TD1Q5T7N2 865 aaKnown RBP12.4□□□□□ -0.42
CDK9-205ENST00000498339 DPH6Q7L8W6 267 aa12.4□□□□□ -0.42
CDK9-205ENST00000498339 ZNF720Q7Z2F6 126 aa12.4□□□□□ -0.42
CDK9-205ENST00000498339 MIB1Q86YT6 1006 aa12.4□□□□□ -0.42
CDK9-205ENST00000498339 BBS7Q8IWZ6 715 aa12.4□□□□□ -0.42
CDK9-205ENST00000498339 PDZD8Q8NEN9 1154 aa12.4□□□□□ -0.42
CDK9-205ENST00000498339 OR6B3Q8NGW1 331 aa12.4□□□□□ -0.42
CDK9-205ENST00000498339 MYCBPAPQ8TBZ2 947 aa12.4□□□□□ -0.42
CDK9-205ENST00000498339 ADAM32Q8TC27 787 aa12.4□□□□□ -0.42
CDK9-205ENST00000498339 C8orf48Q96LL4 319 aa12.4□□□□□ -0.42
CDK9-205ENST00000498339 ACOX2Q99424 681 aa12.4□□□□□ -0.42
CDK9-205ENST00000498339 ELOVL4Q9GZR5 314 aa12.4□□□□□ -0.42
CDK9-205ENST00000498339 GAREM1Q9H706 876 aa12.4□□□□□ -0.42
CDK9-205ENST00000498339 URB1O60287 2271 aaKnown RBP12.4□□□□□ -0.42
CDK9-205ENST00000498339 COCHO43405 550 aa12.39□□□□□ -0.43
CDK9-205ENST00000498339 EIF5BO60841 1220 aaKnown RBP12.39□□□□□ -0.43
CDK9-205ENST00000498339 PRPF6O94906 941 aaKnown RBP12.39□□□□□ -0.43
CDK9-205ENST00000498339 GARTP22102 1010 aa12.39□□□□□ -0.43
CDK9-205ENST00000498339 WARSP23381 471 aaKnown RBP12.39□□□□□ -0.43
CDK9-205ENST00000498339 YWHAQP27348 245 aa12.39□□□□□ -0.43
CDK9-205ENST00000498339 CD6P30203 668 aa12.39□□□□□ -0.43
CDK9-205ENST00000498339 MATKP42679 507 aa12.39□□□□□ -0.43
CDK9-205ENST00000498339 CYP4F3Q08477 520 aa12.39□□□□□ -0.43
CDK9-205ENST00000498339 HECTD3Q5T447 861 aa12.39□□□□□ -0.43
CDK9-205ENST00000498339 TMPRSS7Q7RTY8 843 aa12.39□□□□□ -0.43
CDK9-205ENST00000498339 GLRX5Q86SX6 157 aa12.39□□□□□ -0.43
CDK9-205ENST00000498339 TMEM25Q86YD3 366 aa12.39□□□□□ -0.43
CDK9-205ENST00000498339 MARCH9Q86YJ5 346 aa12.39□□□□□ -0.43
CDK9-205ENST00000498339 CXorf38Q8TB03 319 aa12.39□□□□□ -0.43
CDK9-205ENST00000498339 CRELD1Q96HD1 420 aa12.39□□□□□ -0.43
CDK9-205ENST00000498339 ZNF419Q96HQ0 510 aaPredicted RBP12.39□□□□□ -0.43
CDK9-205ENST00000498339 XPO6Q96QU8 1125 aaKnown RBP12.39□□□□□ -0.43
CDK9-205ENST00000498339 CBWD1Q9BRT8 395 aa12.39□□□□□ -0.43
CDK9-205ENST00000498339 BBS2Q9BXC9 721 aa12.39□□□□□ -0.43
CDK9-205ENST00000498339 IL21RQ9HBE5 538 aa12.39□□□□□ -0.43
CDK9-205ENST00000498339 TM7SF3Q9NS93 570 aa12.39□□□□□ -0.43
CDK9-205ENST00000498339 CACNA2D2Q9NY47 1150 aa12.39□□□□□ -0.43
CDK9-205ENST00000498339 SEL1LQ9UBV2 794 aa12.39□□□□□ -0.43
CDK9-205ENST00000498339 CLDN5O00501 218 aa12.38□□□□□ -0.43
CDK9-205ENST00000498339 CBFA2T3O75081 653 aa12.38□□□□□ -0.43
CDK9-205ENST00000498339 CILPO75339 1184 aa12.38□□□□□ -0.43
CDK9-205ENST00000498339 PPP1R37O75864 691 aa12.38□□□□□ -0.43
CDK9-205ENST00000498339 RTN3O95197 1032 aaPredicted RBP12.38□□□□□ -0.43
CDK9-205ENST00000498339 PRB1P04280 392 aa12.38□□□□□ -0.43
CDK9-205ENST00000498339 NCAM1P13591 858 aa12.38□□□□□ -0.43
CDK9-205ENST00000498339 GNL1P36915 607 aaPredicted RBP12.38□□□□□ -0.43
CDK9-205ENST00000498339 ABCG1P45844 678 aa12.38□□□□□ -0.43
CDK9-205ENST00000498339 CACNA2D1P54289 1103 aa12.38□□□□□ -0.43
CDK9-205ENST00000498339 TNNC1P63316 161 aa12.38□□□□□ -0.43
CDK9-205ENST00000498339 STARD3Q14849 445 aa12.38□□□□□ -0.43
CDK9-205ENST00000498339 TPGS1Q6ZTW0 290 aa12.38□□□□□ -0.43
CDK9-205ENST00000498339 NUP93Q8N1F7 819 aa12.38□□□□□ -0.43
CDK9-205ENST00000498339 GALNT15Q8N3T1 639 aa12.38□□□□□ -0.43
CDK9-205ENST00000498339 OR5B17Q8NGF7 314 aa12.38□□□□□ -0.43
CDK9-205ENST00000498339 PIP4K2CQ8TBX8 421 aa12.38□□□□□ -0.43
CDK9-205ENST00000498339 RHBDD1Q8TEB9 315 aa12.38□□□□□ -0.43
CDK9-205ENST00000498339 SNX19Q92543 992 aa12.38□□□□□ -0.43
CDK9-205ENST00000498339 TOE1Q96GM8 510 aaKnown RBP12.38□□□□□ -0.43
CDK9-205ENST00000498339 ZFRQ96KR1 1074 aaKnown RBP12.38□□□□□ -0.43
CDK9-205ENST00000498339 MRGPRX1Q96LB2 322 aa12.38□□□□□ -0.43
CDK9-205ENST00000498339 UBL7Q96S82 380 aaPredicted RBP12.38□□□□□ -0.43
CDK9-205ENST00000498339 CDC6Q99741 560 aa12.38□□□□□ -0.43
CDK9-205ENST00000498339 MED10Q9BTT4 135 aa12.38□□□□□ -0.43
CDK9-205ENST00000498339 GPR174Q9BXC1 333 aa12.38□□□□□ -0.43
CDK9-205ENST00000498339 ZNF518BQ9C0D4 1074 aa12.38□□□□□ -0.43
CDK9-205ENST00000498339 DPEP3Q9H4B8 488 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms