RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 TNFRSF21O75509 655 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 THRBP10828 461 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 RLBP1P12271 317 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 OSMP13725 252 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 CD1DP15813 335 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 DRD5P21918 477 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 LHCGRP22888 699 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 GCKP35557 465 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 SERPINF1P36955 418 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 DEFA1P59665 94 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 ATP2C1P98194 919 aaPredicted RBP1.53□□□□□ -2.17
XRN1-214ENST00000498077 PTH1RQ03431 593 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 TGM3Q08188 693 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 CAMK2GQ13555 558 aaPredicted RBP1.53□□□□□ -2.17
XRN1-214ENST00000498077 KEAP1Q14145 624 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 MYBPC3Q14896 1274 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 BRD3Q15059 726 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 KRT71Q3SY84 523 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 FSCBQ5H9T9 825 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 CRB2Q5IJ48 1285 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 RPS26P11Q5JNZ5 115 aaPredicted RBP1.53□□□□□ -2.17
XRN1-214ENST00000498077 C16orf46Q6P387 395 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 SHC4Q6S5L8 630 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 HSDL2Q6YN16 418 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 DTHD1Q6ZMT9 781 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 TMTC3Q6ZXV5 915 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 ASCL5Q7RTU5 278 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 FAM122BQ7Z309 247 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 CCDC186Q7Z3E2 898 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 UBE2Q1Q7Z7E8 422 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 MORC1Q86VD1 984 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 ALDH16A1Q8IZ83 802 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 FAM9BQ8IZU0 186 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 DPP10Q8N608 796 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 ACOT4Q8N9L9 421 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 SNX31Q8N9S9 440 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 NFAM1Q8NET5 270 aaPredicted RBP1.53□□□□□ -2.17
XRN1-214ENST00000498077 FDCSPQ8NFU4 85 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 RXFP2Q8WXD0 754 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 MYLIPQ8WY64 445 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 DDX17Q92841 729 aaKnown RBP1.53□□□□□ -2.17
XRN1-214ENST00000498077 HDAC10Q969S8 669 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 CLUAP1Q96AJ1 413 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 C18orf25Q96B23 403 aaPredicted RBP1.53□□□□□ -2.17
XRN1-214ENST00000498077 TCTN2Q96GX1 697 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 SLC39A13Q96H72 371 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 POM121Q96HA1 1249 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 FAM83CQ9BQN1 747 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 HEPHQ9BQS7 1158 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 UBXN6Q9BZV1 441 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 WDR12Q9GZL7 423 aaKnown RBP1.53□□□□□ -2.17
XRN1-214ENST00000498077 PDGFDQ9GZP0 370 aaPredicted RBP1.53□□□□□ -2.17
XRN1-214ENST00000498077 MS4A5Q9H3V2 200 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 MKNK2Q9HBH9 465 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 ATP8A2Q9NTI2 1148 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 WWOXQ9NZC7 414 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 ZNF229Q9UJW7 825 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 SSX2IPQ9Y2D8 614 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 ACOT9Q9Y305 439 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 NSG2Q9Y328 171 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 PRR36Q9H6K5 1346 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 KIF24Q5T7B8 1368 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 VWA3AA6NCI4 1184 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 IFITM10A6NMD0 228 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 TNPO2O14787 897 aaKnown RBP1.52□□□□□ -2.17
XRN1-214ENST00000498077 CASKO14936 926 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 PYGLP06737 847 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 FCGR1AP12314 374 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 EN2P19622 333 aaPredicted RBP1.52□□□□□ -2.17
XRN1-214ENST00000498077 TCEA1P23193 301 aaKnown RBP1.52□□□□□ -2.17
XRN1-214ENST00000498077 KLRC2P26717 231 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 CD68P34810 354 aaPredicted RBP1.52□□□□□ -2.17
XRN1-214ENST00000498077 IDH3AP50213 366 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 FCGRTP55899 365 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 VBP1P61758 197 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 ERVK-24P63145 666 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 OCA2Q04671 838 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 TAF9Q16594 264 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 PCK2Q16822 640 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 AWAT1Q58HT5 328 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 EXOSC6Q5RKV6 272 aaKnown RBP1.52□□□□□ -2.17
XRN1-214ENST00000498077 LEMD1Q68G75 181 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 SFRP4Q6FHJ7 346 aaPredicted RBP1.52□□□□□ -2.17
XRN1-214ENST00000498077 ASPHD2Q6ICH7 369 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 CENPPQ6IPU0 288 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 ZNF746Q6NUN9 644 aaPredicted RBP1.52□□□□□ -2.17
XRN1-214ENST00000498077 SARM1Q6SZW1 724 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 ZNF574Q6ZN55 896 aaPredicted RBP1.52□□□□□ -2.17
XRN1-214ENST00000498077 MFSD6Q6ZSS7 791 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 KIAA0408Q6ZU52 694 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 TMEM26Q6ZUK4 368 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 OVCH1Q7RTY7 1134 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 RAB11FIP4Q86YS3 637 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 CLYBLQ8N0X4 340 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 TEX9Q8N6V9 391 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 TCEANCQ8N8B7 351 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 PNPLA1Q8N8W4 532 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 B3GALNT2Q8NCR0 500 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 GBP4Q96PP9 640 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 GTPBP2Q9BX10 602 aaKnown RBP1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms