RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 WIPF2Q8TF74 440 aaPredicted RBP4.78□□□□□ -1.64
SMC4-227ENST00000497984 HOOK2Q96ED9 719 aa4.78□□□□□ -1.64
SMC4-227ENST00000497984 ZBTB40Q9NUA8 1239 aa4.78□□□□□ -1.64
SMC4-227ENST00000497984 ZSCAN32Q9NX65 697 aa4.78□□□□□ -1.64
SMC4-227ENST00000497984 MGAT4CQ9UBM8 478 aa4.78□□□□□ -1.64
SMC4-227ENST00000497984 USP22Q9UPT9 525 aa4.78□□□□□ -1.64
SMC4-227ENST00000497984 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.78□□□□□ -1.64
SMC4-227ENST00000497984 SQORQ9Y6N5 450 aa4.78□□□□□ -1.64
SMC4-227ENST00000497984 A0A1W2PPL8 197 aa4.77□□□□□ -1.65
SMC4-227ENST00000497984 CD3EAPO15446 510 aaKnown RBP4.77□□□□□ -1.65
SMC4-227ENST00000497984 AP1G1O43747 822 aa4.77□□□□□ -1.65
SMC4-227ENST00000497984 TMPRSS11DO60235 418 aa4.77□□□□□ -1.65
SMC4-227ENST00000497984 SRGAP2O75044 1071 aa4.77□□□□□ -1.65
SMC4-227ENST00000497984 KITP10721 976 aa4.77□□□□□ -1.65
SMC4-227ENST00000497984 PRKAR1BP31321 381 aa4.77□□□□□ -1.65
SMC4-227ENST00000497984 YPEL5P62699 121 aa4.77□□□□□ -1.65
SMC4-227ENST00000497984 CFHR3Q02985 330 aa4.77□□□□□ -1.65
SMC4-227ENST00000497984 RAB32Q13637 225 aa4.77□□□□□ -1.65
SMC4-227ENST00000497984 SEMA3AQ14563 771 aa4.77□□□□□ -1.65
SMC4-227ENST00000497984 KCNB1Q14721 858 aa4.77□□□□□ -1.65
SMC4-227ENST00000497984 DENND2CQ68D51 928 aa4.77□□□□□ -1.65
SMC4-227ENST00000497984 VSTM1Q6UX27 236 aa4.77□□□□□ -1.65
SMC4-227ENST00000497984 DLK2Q6UY11 383 aa4.77□□□□□ -1.65
SMC4-227ENST00000497984 UBE2Q1Q7Z7E8 422 aa4.77□□□□□ -1.65
SMC4-227ENST00000497984 PIM3Q86V86 326 aa4.77□□□□□ -1.65
SMC4-227ENST00000497984 COL23A1Q86Y22 540 aaPredicted RBP4.77□□□□□ -1.65
SMC4-227ENST00000497984 OR56A3Q8NH54 315 aa4.77□□□□□ -1.65
SMC4-227ENST00000497984 PPP1R35Q8TAP8 253 aa4.77□□□□□ -1.65
SMC4-227ENST00000497984 TRMOQ9BU70 441 aa4.77□□□□□ -1.65
SMC4-227ENST00000497984 ATP6V0A4Q9HBG4 840 aa4.77□□□□□ -1.65
SMC4-227ENST00000497984 B4DGG1 531 aa4.76□□□□□ -1.65
SMC4-227ENST00000497984 GTPBP1O00178 669 aaKnown RBP4.76□□□□□ -1.65
SMC4-227ENST00000497984 TBC1D4O60343 1298 aa4.76□□□□□ -1.65
SMC4-227ENST00000497984 EN2P19622 333 aaPredicted RBP4.76□□□□□ -1.65
SMC4-227ENST00000497984 TNFRSF1BP20333 461 aa4.76□□□□□ -1.65
SMC4-227ENST00000497984 MCM5P33992 734 aa4.76□□□□□ -1.65
SMC4-227ENST00000497984 B3GNT9Q6UX72 402 aa4.76□□□□□ -1.65
SMC4-227ENST00000497984 COLCA1Q6ZS62 124 aa4.76□□□□□ -1.65
SMC4-227ENST00000497984 KCTD20Q7Z5Y7 419 aa4.76□□□□□ -1.65
SMC4-227ENST00000497984 DAAM2Q86T65 1068 aa4.76□□□□□ -1.65
SMC4-227ENST00000497984 RBMXL3Q8N7X1 1067 aaKnown RBP4.76□□□□□ -1.65
SMC4-227ENST00000497984 EDC3Q96F86 508 aaKnown RBP4.76□□□□□ -1.65
SMC4-227ENST00000497984 FAM234AQ9H0X4 552 aa4.76□□□□□ -1.65
SMC4-227ENST00000497984 TRIM36Q9NQ86 728 aa4.76□□□□□ -1.65
SMC4-227ENST00000497984 AGPSO00116 658 aa4.75□□□□□ -1.65
SMC4-227ENST00000497984 TULP3O75386 442 aa4.75□□□□□ -1.65
SMC4-227ENST00000497984 FGF2P09038 288 aa4.75□□□□□ -1.65
SMC4-227ENST00000497984 AGFG1P52594 562 aaKnown RBP4.75□□□□□ -1.65
SMC4-227ENST00000497984 SLC14A1Q13336 389 aa4.75□□□□□ -1.65
SMC4-227ENST00000497984 MTX1Q13505 466 aa4.75□□□□□ -1.65
SMC4-227ENST00000497984 UBAP2Q5T6F2 1119 aaKnown RBP4.75□□□□□ -1.65
SMC4-227ENST00000497984 MICU3Q86XE3 530 aa4.75□□□□□ -1.65
SMC4-227ENST00000497984 CHPFQ8IZ52 775 aa4.75□□□□□ -1.65
SMC4-227ENST00000497984 IL31RAQ8NI17 732 aa4.75□□□□□ -1.65
SMC4-227ENST00000497984 MPLKIPQ8TAP9 179 aa4.75□□□□□ -1.65
SMC4-227ENST00000497984 ZBTB45Q96K62 511 aaPredicted RBP4.75□□□□□ -1.65
SMC4-227ENST00000497984 HS6ST2Q96MM7 605 aa4.75□□□□□ -1.65
SMC4-227ENST00000497984 PPP1R9BQ96SB3 815 aa4.75□□□□□ -1.65
SMC4-227ENST00000497984 ACO2Q99798 780 aaKnown RBP4.75□□□□□ -1.65
SMC4-227ENST00000497984 RHOBTB2Q9BYZ6 727 aa4.75□□□□□ -1.65
SMC4-227ENST00000497984 ZNF518BQ9C0D4 1074 aa4.75□□□□□ -1.65
SMC4-227ENST00000497984 HIPK2Q9H2X6 1198 aa4.75□□□□□ -1.65
SMC4-227ENST00000497984 A1CFQ9NQ94 594 aaKnown RBP4.75□□□□□ -1.65
SMC4-227ENST00000497984 AASDHPPTQ9NRN7 309 aa4.75□□□□□ -1.65
SMC4-227ENST00000497984 ASAP1Q9ULH1 1129 aa4.75□□□□□ -1.65
SMC4-227ENST00000497984 CLIC1O00299 241 aa4.74□□□□□ -1.65
SMC4-227ENST00000497984 PHGDHO43175 533 aaKnown RBP4.74□□□□□ -1.65
SMC4-227ENST00000497984 RRP9O43818 475 aaKnown RBP4.74□□□□□ -1.65
SMC4-227ENST00000497984 MTHFSP49914 203 aa4.74□□□□□ -1.65
SMC4-227ENST00000497984 HSF1Q00613 529 aa4.74□□□□□ -1.65
SMC4-227ENST00000497984 DEUP1Q05D60 604 aa4.74□□□□□ -1.65
SMC4-227ENST00000497984 MFSD13AQ14CX5 517 aa4.74□□□□□ -1.65
SMC4-227ENST00000497984 INSCQ1MX18 579 aa4.74□□□□□ -1.65
SMC4-227ENST00000497984 SLC9C1Q4G0N8 1177 aa4.74□□□□□ -1.65
SMC4-227ENST00000497984 MMP21Q8N119 569 aa4.74□□□□□ -1.65
SMC4-227ENST00000497984 C12orf76Q8N812 135 aaPredicted RBP4.74□□□□□ -1.65
SMC4-227ENST00000497984 SPSB4Q96A44 273 aa4.74□□□□□ -1.65
SMC4-227ENST00000497984 PNMA8BQ9ULN7 279 aaPredicted RBP4.74□□□□□ -1.65
SMC4-227ENST00000497984 MAFFQ9ULX9 164 aa4.74□□□□□ -1.65
SMC4-227ENST00000497984 H7C4K7 107 aa4.73□□□□□ -1.65
SMC4-227ENST00000497984 EXOC5O00471 708 aa4.73□□□□□ -1.65
SMC4-227ENST00000497984 TBX3O15119 743 aa4.73□□□□□ -1.65
SMC4-227ENST00000497984 CCP110O43303 1012 aa4.73□□□□□ -1.65
SMC4-227ENST00000497984 RASAL1O95294 804 aa4.73□□□□□ -1.65
SMC4-227ENST00000497984 HGFP14210 728 aa4.73□□□□□ -1.65
SMC4-227ENST00000497984 NPY5RQ15761 445 aa4.73□□□□□ -1.65
SMC4-227ENST00000497984 ZNF750Q32MQ0 723 aa4.73□□□□□ -1.65
SMC4-227ENST00000497984 CACHD1Q5VU97 1274 aa4.73□□□□□ -1.65
SMC4-227ENST00000497984 KRTAP5-4Q6L8H1 288 aa4.73□□□□□ -1.65
SMC4-227ENST00000497984 ZNF549Q6P9A3 640 aa4.73□□□□□ -1.65
SMC4-227ENST00000497984 KRT78Q8N1N4 520 aa4.73□□□□□ -1.65
SMC4-227ENST00000497984 METTL25Q8N6Q8 603 aa4.73□□□□□ -1.65
SMC4-227ENST00000497984 SLC35G2Q8TBE7 412 aa4.73□□□□□ -1.65
SMC4-227ENST00000497984 HIC2Q96JB3 615 aa4.73□□□□□ -1.65
SMC4-227ENST00000497984 AIFM3Q96NN9 605 aa4.73□□□□□ -1.65
SMC4-227ENST00000497984 TAAR9Q96RI9 348 aa4.73□□□□□ -1.65
SMC4-227ENST00000497984 BRINP2Q9C0B6 783 aa4.73□□□□□ -1.65
SMC4-227ENST00000497984 NMRK2Q9NPI5 230 aa4.73□□□□□ -1.65
SMC4-227ENST00000497984 STK32BQ9NY57 414 aa4.73□□□□□ -1.65
SMC4-227ENST00000497984 PAXBP1Q9Y5B6 917 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms