RNA–Protein interactions for RNA: ENST00000497015.5

SRSF4-205, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-205ENST00000497015 RAI2Q9Y5P3 530 aa10.49□□□□□ -0.73
SRSF4-205ENST00000497015 URB1O60287 2271 aaKnown RBP10.49□□□□□ -0.73
SRSF4-205ENST00000497015 APC2O95996 2303 aa10.49□□□□□ -0.73
SRSF4-205ENST00000497015 SCN1AP35498 2009 aa10.48□□□□□ -0.73
SRSF4-205ENST00000497015 PI4KAP42356 2102 aa10.48□□□□□ -0.73
SRSF4-205ENST00000497015 A0A0A0MRY4 1105 aa10.48□□□□□ -0.73
SRSF4-205ENST00000497015 TRABD2BA6NFA1 517 aa10.48□□□□□ -0.73
SRSF4-205ENST00000497015 LACTBL1A8MY62 500 aa10.48□□□□□ -0.73
SRSF4-205ENST00000497015 ANKRD63C9JTQ0 380 aa10.48□□□□□ -0.73
SRSF4-205ENST00000497015 DKK1O94907 266 aa10.48□□□□□ -0.73
SRSF4-205ENST00000497015 KLF8O95600 359 aaPredicted RBP10.48□□□□□ -0.73
SRSF4-205ENST00000497015 RPN1P04843 607 aaKnown RBP10.48□□□□□ -0.73
SRSF4-205ENST00000497015 ITPKBP27987 946 aa10.48□□□□□ -0.73
SRSF4-205ENST00000497015 ADSSP30520 456 aa10.48□□□□□ -0.73
SRSF4-205ENST00000497015 KIR2DL1P43626 348 aaPredicted RBP10.48□□□□□ -0.73
SRSF4-205ENST00000497015 ATXN3P54252 364 aaPredicted RBP10.48□□□□□ -0.73
SRSF4-205ENST00000497015 UBE2HP62256 183 aa10.48□□□□□ -0.73
SRSF4-205ENST00000497015 HNRNPDQ14103 355 aaKnown RBP10.48□□□□□ -0.73
SRSF4-205ENST00000497015 KMT5BQ4FZB7 885 aa10.48□□□□□ -0.73
SRSF4-205ENST00000497015 SPDYCQ5MJ68 293 aa10.48□□□□□ -0.73
SRSF4-205ENST00000497015 ARMCX5Q6P1M9 558 aa10.48□□□□□ -0.73
SRSF4-205ENST00000497015 PCSK4Q6UW60 755 aa10.48□□□□□ -0.73
SRSF4-205ENST00000497015 HS2ST1Q7LGA3 356 aa10.48□□□□□ -0.73
SRSF4-205ENST00000497015 LURAP1LQ8IV03 231 aa10.48□□□□□ -0.73
SRSF4-205ENST00000497015 SCFD1Q8WVM8 642 aa10.48□□□□□ -0.73
SRSF4-205ENST00000497015 GSDMAQ96QA5 445 aa10.48□□□□□ -0.73
SRSF4-205ENST00000497015 BLZF1Q9H2G9 400 aa10.48□□□□□ -0.73
SRSF4-205ENST00000497015 KIF9Q9HAQ2 790 aa10.48□□□□□ -0.73
SRSF4-205ENST00000497015 RMND1Q9NWS8 449 aa10.48□□□□□ -0.73
SRSF4-205ENST00000497015 TBC1D7Q9P0N9 293 aa10.48□□□□□ -0.73
SRSF4-205ENST00000497015 GCNT4Q9P109 453 aa10.48□□□□□ -0.73
SRSF4-205ENST00000497015 KIAA1522Q9P206 1035 aaPredicted RBP10.48□□□□□ -0.73
SRSF4-205ENST00000497015 PTPRBP23467 1997 aa10.48□□□□□ -0.73
SRSF4-205ENST00000497015 HELZP42694 1942 aaKnown RBP10.47□□□□□ -0.73
SRSF4-205ENST00000497015 DENND4CQ5VZ89 1909 aa10.47□□□□□ -0.73
SRSF4-205ENST00000497015 CFAP46Q8IYW2 2715 aa10.47□□□□□ -0.73
SRSF4-205ENST00000497015 TK2O00142 265 aa10.47□□□□□ -0.73
SRSF4-205ENST00000497015 PRPF6O94906 941 aaKnown RBP10.47□□□□□ -0.73
SRSF4-205ENST00000497015 SMC2O95347 1197 aa10.47□□□□□ -0.73
SRSF4-205ENST00000497015 CYP11A1P05108 521 aa10.47□□□□□ -0.73
SRSF4-205ENST00000497015 MRPS21P82921 87 aaKnown RBP10.47□□□□□ -0.73
SRSF4-205ENST00000497015 ZNF33AQ06730 810 aa10.47□□□□□ -0.73
SRSF4-205ENST00000497015 USP4Q13107 963 aa10.47□□□□□ -0.73
SRSF4-205ENST00000497015 SLC14A1Q13336 389 aa10.47□□□□□ -0.73
SRSF4-205ENST00000497015 SURF1Q15526 300 aa10.47□□□□□ -0.73
SRSF4-205ENST00000497015 ENOX2Q16206 610 aaKnown RBP10.47□□□□□ -0.73
SRSF4-205ENST00000497015 NFIL3Q16649 462 aa10.47□□□□□ -0.73
SRSF4-205ENST00000497015 KNOP1Q1ED39 458 aaKnown RBP10.47□□□□□ -0.73
SRSF4-205ENST00000497015 COBLL1Q53SF7 1204 aa10.47□□□□□ -0.73
SRSF4-205ENST00000497015 GLRX5Q86SX6 157 aa10.47□□□□□ -0.73
SRSF4-205ENST00000497015 C12orf40Q86WS4 652 aa10.47□□□□□ -0.73
SRSF4-205ENST00000497015 BRSK2Q8IWQ3 736 aa10.47□□□□□ -0.73
SRSF4-205ENST00000497015 ADGRG2Q8IZP9 1017 aa10.47□□□□□ -0.73
SRSF4-205ENST00000497015 GPD1LQ8N335 351 aa10.47□□□□□ -0.73
SRSF4-205ENST00000497015 CEP76Q8TAP6 659 aa10.47□□□□□ -0.73
SRSF4-205ENST00000497015 SPATA20Q8TB22 786 aa10.47□□□□□ -0.73
SRSF4-205ENST00000497015 MRRFQ96E11 262 aaKnown RBP10.47□□□□□ -0.73
SRSF4-205ENST00000497015 UBL7Q96S82 380 aaPredicted RBP10.47□□□□□ -0.73
SRSF4-205ENST00000497015 FGFBP2Q9BYJ0 223 aa10.47□□□□□ -0.73
SRSF4-205ENST00000497015 PRORYQ9H606 182 aa10.47□□□□□ -0.73
SRSF4-205ENST00000497015 ZMYM5Q9UJ78 669 aa10.47□□□□□ -0.73
SRSF4-205ENST00000497015 TSC2P49815 1807 aa10.47□□□□□ -0.73
SRSF4-205ENST00000497015 C2orf78A6NCI8 922 aa10.46□□□□□ -0.73
SRSF4-205ENST00000497015 PIRO00625 290 aa10.46□□□□□ -0.73
SRSF4-205ENST00000497015 PDXKO00764 312 aa10.46□□□□□ -0.73
SRSF4-205ENST00000497015 ATXN7O15265 892 aaPredicted RBP10.46□□□□□ -0.73
SRSF4-205ENST00000497015 ATXN1LP0C7T5 689 aaKnown RBP10.46□□□□□ -0.73
SRSF4-205ENST00000497015 DDX6P26196 483 aaKnown RBP eCLIP10.46□□□□□ -0.73
SRSF4-205ENST00000497015 HOXD12P35452 270 aa10.46□□□□□ -0.73
SRSF4-205ENST00000497015 HOXD13P35453 343 aa10.46□□□□□ -0.73
SRSF4-205ENST00000497015 PPP1R2P41236 205 aa10.46□□□□□ -0.73
SRSF4-205ENST00000497015 VEPH1Q14D04 833 aa10.46□□□□□ -0.73
SRSF4-205ENST00000497015 SPATA1Q5VX52 437 aa10.46□□□□□ -0.73
SRSF4-205ENST00000497015 SCARA3Q6AZY7 606 aa10.46□□□□□ -0.73
SRSF4-205ENST00000497015 CRELD2Q6UXH1 353 aaPredicted RBP10.46□□□□□ -0.73
SRSF4-205ENST00000497015 DNAJC14Q6Y2X3 702 aaPredicted RBP10.46□□□□□ -0.73
SRSF4-205ENST00000497015 ZNF605Q86T29 641 aa10.46□□□□□ -0.73
SRSF4-205ENST00000497015 SLC9A9Q8IVB4 645 aa10.46□□□□□ -0.73
SRSF4-205ENST00000497015 NAXDQ8IW45 347 aa10.46□□□□□ -0.73
SRSF4-205ENST00000497015 SCUBE3Q8IX30 993 aa10.46□□□□□ -0.73
SRSF4-205ENST00000497015 GRAMD1CQ8IYS0 662 aa10.46□□□□□ -0.73
SRSF4-205ENST00000497015 GUF1Q8N442 669 aaKnown RBP10.46□□□□□ -0.73
SRSF4-205ENST00000497015 ARL14EPQ8N8R7 260 aaPredicted RBP10.46□□□□□ -0.73
SRSF4-205ENST00000497015 KIAA0895Q8NCT3 520 aa10.46□□□□□ -0.73
SRSF4-205ENST00000497015 TTC16Q8NEE8 873 aa10.46□□□□□ -0.73
SRSF4-205ENST00000497015 SH3RF2Q8TEC5 729 aa10.46□□□□□ -0.73
SRSF4-205ENST00000497015 WHAMMQ8TF30 809 aa10.46□□□□□ -0.73
SRSF4-205ENST00000497015 CACTINQ8WUQ7 758 aaKnown RBP10.46□□□□□ -0.73
SRSF4-205ENST00000497015 HMGB4Q8WW32 186 aa10.46□□□□□ -0.73
SRSF4-205ENST00000497015 ATP2A3Q93084 1043 aa10.46□□□□□ -0.73
SRSF4-205ENST00000497015 IL21RQ9HBE5 538 aa10.46□□□□□ -0.73
SRSF4-205ENST00000497015 SLC39A2Q9NP94 309 aa10.46□□□□□ -0.73
SRSF4-205ENST00000497015 CD93Q9NPY3 652 aa10.46□□□□□ -0.73
SRSF4-205ENST00000497015 AGPAT3Q9NRZ7 376 aa10.46□□□□□ -0.73
SRSF4-205ENST00000497015 PCOLCE2Q9UKZ9 415 aa10.46□□□□□ -0.73
SRSF4-205ENST00000497015 MAGED2Q9UNF1 606 aaPredicted RBP10.46□□□□□ -0.73
SRSF4-205ENST00000497015 SHROOM3Q8TF72 1996 aa10.46□□□□□ -0.74
SRSF4-205ENST00000497015 ANO9A1A5B4 782 aa10.45□□□□□ -0.74
SRSF4-205ENST00000497015 FAM149AA5PLN7 773 aa10.45□□□□□ -0.74
SRSF4-205ENST00000497015 ZNF233A6NK53 670 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms