RNA–Protein interactions for RNA: ENST00000496882.5

SRRM1-220, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-220ENST00000496882 COMMD8Q9NX08 183 aa8.31□□□□□ -1.08
SRRM1-220ENST00000496882 USP18Q9UMW8 372 aa8.31□□□□□ -1.08
SRRM1-220ENST00000496882 WNT6Q9Y6F9 365 aa8.31□□□□□ -1.08
SRRM1-220ENST00000496882 COL4A2P08572 1712 aa8.31□□□□□ -1.08
SRRM1-220ENST00000496882 ZNF840PA6NDX5 716 aa8.3□□□□□ -1.08
SRRM1-220ENST00000496882 CHURC1-FNTBB4DL54 471 aa8.3□□□□□ -1.08
SRRM1-220ENST00000496882 LEFTY2O00292 366 aa8.3□□□□□ -1.08
SRRM1-220ENST00000496882 AKAP3O75969 853 aa8.3□□□□□ -1.08
SRRM1-220ENST00000496882 PAPSS2O95340 614 aaPredicted RBP8.3□□□□□ -1.08
SRRM1-220ENST00000496882 VNN1O95497 513 aa8.3□□□□□ -1.08
SRRM1-220ENST00000496882 ASS1P00966 412 aaKnown RBP8.3□□□□□ -1.08
SRRM1-220ENST00000496882 FAM200BP0CF97 657 aa8.3□□□□□ -1.08
SRRM1-220ENST00000496882 TRIM49P0CI25 452 aa8.3□□□□□ -1.08
SRRM1-220ENST00000496882 TRIM49CP0CI26 452 aa8.3□□□□□ -1.08
SRRM1-220ENST00000496882 CCDC130P13994 396 aa8.3□□□□□ -1.08
SRRM1-220ENST00000496882 SDHBP21912 280 aa8.3□□□□□ -1.08
SRRM1-220ENST00000496882 ADORA2BP29275 332 aa8.3□□□□□ -1.08
SRRM1-220ENST00000496882 GTF2H1P32780 548 aa8.3□□□□□ -1.08
SRRM1-220ENST00000496882 GJA4P35212 333 aa8.3□□□□□ -1.08
SRRM1-220ENST00000496882 GCLMP48507 274 aa8.3□□□□□ -1.08
SRRM1-220ENST00000496882 FNTBP49356 437 aa8.3□□□□□ -1.08
SRRM1-220ENST00000496882 MXI1P50539 228 aa8.3□□□□□ -1.08
SRRM1-220ENST00000496882 SLC5A3P53794 718 aa8.3□□□□□ -1.08
SRRM1-220ENST00000496882 SLC7A9P82251 487 aa8.3□□□□□ -1.08
SRRM1-220ENST00000496882 GOLGA8FQ08AF8 430 aa8.3□□□□□ -1.08
SRRM1-220ENST00000496882 GOLGA8DPQ0D2H9 430 aa8.3□□□□□ -1.08
SRRM1-220ENST00000496882 SIM2Q14190 667 aaPredicted RBP8.3□□□□□ -1.08
SRRM1-220ENST00000496882 PREPLQ4J6C6 727 aaPredicted RBP8.3□□□□□ -1.08
SRRM1-220ENST00000496882 HECTD3Q5T447 861 aa8.3□□□□□ -1.08
SRRM1-220ENST00000496882 TCERG1LQ5VWI1 586 aa8.3□□□□□ -1.08
SRRM1-220ENST00000496882 KRT39Q6A163 491 aa8.3□□□□□ -1.08
SRRM1-220ENST00000496882 HEATR6Q6AI08 1181 aaKnown RBP8.3□□□□□ -1.08
SRRM1-220ENST00000496882 LAIR1Q6GTX8 287 aa8.3□□□□□ -1.08
SRRM1-220ENST00000496882 Q6ZS52 159 aa8.3□□□□□ -1.08
SRRM1-220ENST00000496882 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.3□□□□□ -1.08
SRRM1-220ENST00000496882 KIAA1958Q8N8K9 716 aa8.3□□□□□ -1.08
SRRM1-220ENST00000496882 SUMF1Q8NBK3 374 aa8.3□□□□□ -1.08
SRRM1-220ENST00000496882 NELL1Q92832 810 aa8.3□□□□□ -1.08
SRRM1-220ENST00000496882 GSDMAQ96QA5 445 aa8.3□□□□□ -1.08
SRRM1-220ENST00000496882 SLC22A12Q96S37 553 aa8.3□□□□□ -1.08
SRRM1-220ENST00000496882 OCSTAMPQ9BR26 566 aa8.3□□□□□ -1.08
SRRM1-220ENST00000496882 NT5C1AQ9BXI3 368 aa8.3□□□□□ -1.08
SRRM1-220ENST00000496882 NIF3L1Q9GZT8 377 aa8.3□□□□□ -1.08
SRRM1-220ENST00000496882 TMEM8AQ9HCN3 771 aa8.3□□□□□ -1.08
SRRM1-220ENST00000496882 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.3□□□□□ -1.081e-7■■■■□ 21.1
SRRM1-220ENST00000496882 TLR8Q9NR97 1041 aaKnown RBP8.3□□□□□ -1.08
SRRM1-220ENST00000496882 FAM49BQ9NUQ9 324 aa8.3□□□□□ -1.08
SRRM1-220ENST00000496882 SMPD4Q9NXE4 827 aa8.3□□□□□ -1.08
SRRM1-220ENST00000496882 GCNT4Q9P109 453 aa8.3□□□□□ -1.08
SRRM1-220ENST00000496882 TBC1D14Q9P2M4 693 aa8.3□□□□□ -1.08
SRRM1-220ENST00000496882 SH3BP1Q9Y3L3 701 aa8.3□□□□□ -1.08
SRRM1-220ENST00000496882 CPQQ9Y646 472 aa8.3□□□□□ -1.08
SRRM1-220ENST00000496882 ZNF638Q14966 1978 aaKnown RBP8.3□□□□□ -1.08
SRRM1-220ENST00000496882 ADH1CP00326 375 aa8.29□□□□□ -1.08
SRRM1-220ENST00000496882 OAS1P00973 400 aaKnown RBP8.29□□□□□ -1.08
SRRM1-220ENST00000496882 EGFP01133 1207 aa8.29□□□□□ -1.08
SRRM1-220ENST00000496882 CCDC192P0DO97 292 aa8.29□□□□□ -1.08
SRRM1-220ENST00000496882 CD58P19256 250 aa8.29□□□□□ -1.08
SRRM1-220ENST00000496882 PPP1R2P41236 205 aa8.29□□□□□ -1.08
SRRM1-220ENST00000496882 GALK1P51570 392 aa8.29□□□□□ -1.08
SRRM1-220ENST00000496882 MAP3K7CLP57077 242 aa8.29□□□□□ -1.08
SRRM1-220ENST00000496882 SLC8A3P57103 927 aa8.29□□□□□ -1.08
SRRM1-220ENST00000496882 COPS2P61201 443 aa8.29□□□□□ -1.08
SRRM1-220ENST00000496882 YWHAEP62258 255 aaKnown RBP8.29□□□□□ -1.08
SRRM1-220ENST00000496882 FOXK2Q01167 660 aa8.29□□□□□ -1.08
SRRM1-220ENST00000496882 ORC1Q13415 861 aa8.29□□□□□ -1.08
SRRM1-220ENST00000496882 PNOCQ13519 176 aa8.29□□□□□ -1.08
SRRM1-220ENST00000496882 GAS6Q14393 721 aa8.29□□□□□ -1.08
SRRM1-220ENST00000496882 DCAF17Q5H9S7 520 aaPredicted RBP8.29□□□□□ -1.08
SRRM1-220ENST00000496882 ZNF658Q5TYW1 1059 aaPredicted RBP8.29□□□□□ -1.08
SRRM1-220ENST00000496882 BTBD8Q5XKL5 378 aa8.29□□□□□ -1.08
SRRM1-220ENST00000496882 SPOPLQ6IQ16 392 aa8.29□□□□□ -1.08
SRRM1-220ENST00000496882 FSTL4Q6MZW2 842 aa8.29□□□□□ -1.08
SRRM1-220ENST00000496882 TADA2BQ86TJ2 420 aa8.29□□□□□ -1.08
SRRM1-220ENST00000496882 WDR5BQ86VZ2 330 aa8.29□□□□□ -1.08
SRRM1-220ENST00000496882 ANKMY2Q8IV38 441 aa8.29□□□□□ -1.08
SRRM1-220ENST00000496882 CRYBG2Q8N1P7 616 aa8.29□□□□□ -1.08
SRRM1-220ENST00000496882 DCLK2Q8N568 766 aa8.29□□□□□ -1.08
SRRM1-220ENST00000496882 FBXL13Q8NEE6 735 aa8.29□□□□□ -1.08
SRRM1-220ENST00000496882 SLC2A14Q8TDB8 520 aa8.29□□□□□ -1.08
SRRM1-220ENST00000496882 KCNK16Q96T55 309 aa8.29□□□□□ -1.08
SRRM1-220ENST00000496882 SDCBP2Q9H190 292 aa8.29□□□□□ -1.08
SRRM1-220ENST00000496882 CFAP97Q9P2B7 532 aa8.29□□□□□ -1.08
SRRM1-220ENST00000496882 CHORDC1Q9UHD1 332 aaPredicted RBP8.29□□□□□ -1.08
SRRM1-220ENST00000496882 LSM7Q9UK45 103 aaKnown RBP8.29□□□□□ -1.08
SRRM1-220ENST00000496882 NME7Q9Y5B8 376 aa8.29□□□□□ -1.08
SRRM1-220ENST00000496882 ZFHX2Q9C0A1 2572 aaPredicted RBP8.29□□□□□ -1.08
SRRM1-220ENST00000496882 CACNA1IQ9P0X4 2223 aa8.28□□□□□ -1.08
SRRM1-220ENST00000496882 CCDC163A0A0D9SF12 145 aa8.28□□□□□ -1.08
SRRM1-220ENST00000496882 E2F8A0AVK6 867 aa8.28□□□□□ -1.08
SRRM1-220ENST00000496882 PRR5-ARHGAP8B1AHC4 643 aa8.28□□□□□ -1.08
SRRM1-220ENST00000496882 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.28□□□□□ -1.08
SRRM1-220ENST00000496882 PSMA7O14818 248 aa8.28□□□□□ -1.08
SRRM1-220ENST00000496882 SLC16A3O15427 465 aaKnown RBP8.28□□□□□ -1.08
SRRM1-220ENST00000496882 FOXD2O60548 495 aaPredicted RBP8.28□□□□□ -1.08
SRRM1-220ENST00000496882 APODP05090 189 aa8.28□□□□□ -1.08
SRRM1-220ENST00000496882 RETP07949 1114 aa8.28□□□□□ -1.08
SRRM1-220ENST00000496882 IRF1P10914 325 aa8.28□□□□□ -1.08
SRRM1-220ENST00000496882 TDGF1P13385 188 aa8.28□□□□□ -1.08
SRRM1-220ENST00000496882 HOXA6P31267 233 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 152.4 ms