RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 ZNF543Q08ER8 600 aa4.54□□□□□ -1.68
CD46-218ENST00000496723 HLTFQ14527 1009 aaKnown RBP eCLIP4.54□□□□□ -1.68
CD46-218ENST00000496723 KLHDC7AQ5VTJ3 777 aa4.54□□□□□ -1.68
CD46-218ENST00000496723 MORN5Q5VZ52 161 aa4.54□□□□□ -1.68
CD46-218ENST00000496723 MTHFD1LQ6UB35 978 aa4.54□□□□□ -1.68
CD46-218ENST00000496723 RAB11FIP4Q86YS3 637 aa4.54□□□□□ -1.68
CD46-218ENST00000496723 LIX1LQ8IVB5 337 aa4.54□□□□□ -1.68
CD46-218ENST00000496723 CCDC33Q8N5R6 958 aa4.54□□□□□ -1.68
CD46-218ENST00000496723 SIRT6Q8N6T7 355 aa4.54□□□□□ -1.68
CD46-218ENST00000496723 PJA1Q8NG27 643 aa4.54□□□□□ -1.68
CD46-218ENST00000496723 TBCBQ99426 244 aa4.54□□□□□ -1.68
CD46-218ENST00000496723 VN1R3Q9BXE9 311 aa4.54□□□□□ -1.68
CD46-218ENST00000496723 FAM83DQ9H4H8 585 aa4.54□□□□□ -1.68
CD46-218ENST00000496723 NRIP3Q9NQ35 241 aa4.54□□□□□ -1.68
CD46-218ENST00000496723 AGPSO00116 658 aa4.53□□□□□ -1.68
CD46-218ENST00000496723 CES2O00748 559 aa4.53□□□□□ -1.68
CD46-218ENST00000496723 TP73O15350 636 aa4.53□□□□□ -1.68
CD46-218ENST00000496723 THAP12O43422 761 aa4.53□□□□□ -1.68
CD46-218ENST00000496723 EXOC3O60645 756 aa4.53□□□□□ -1.68
CD46-218ENST00000496723 CAND2O75155 1236 aa4.53□□□□□ -1.68
CD46-218ENST00000496723 PMPCBO75439 489 aa4.53□□□□□ -1.68
CD46-218ENST00000496723 LATS1O95835 1130 aa4.53□□□□□ -1.68
CD46-218ENST00000496723 A1BGP04217 495 aa4.53□□□□□ -1.68
CD46-218ENST00000496723 FPR3P25089 353 aa4.53□□□□□ -1.68
CD46-218ENST00000496723 GATMP50440 423 aa4.53□□□□□ -1.68
CD46-218ENST00000496723 TIRAPP58753 221 aa4.53□□□□□ -1.68
CD46-218ENST00000496723 HOXA4Q00056 320 aaPredicted RBP4.53□□□□□ -1.68
CD46-218ENST00000496723 IFIT5Q13325 482 aaKnown RBP4.53□□□□□ -1.68
CD46-218ENST00000496723 RRAGBQ5VZM2 374 aa4.53□□□□□ -1.68
CD46-218ENST00000496723 NEK8Q86SG6 692 aa4.53□□□□□ -1.68
CD46-218ENST00000496723 ATP11CQ8NB49 1132 aa4.53□□□□□ -1.68
CD46-218ENST00000496723 CYP2W1Q8TAV3 490 aa4.53□□□□□ -1.68
CD46-218ENST00000496723 THAP7Q9BT49 309 aaPredicted RBP4.53□□□□□ -1.68
CD46-218ENST00000496723 NAA15Q9BXJ9 866 aaKnown RBP4.53□□□□□ -1.68
CD46-218ENST00000496723 AMFRQ9UKV5 643 aa4.53□□□□□ -1.68
CD46-218ENST00000496723 EXOC5O00471 708 aa4.52□□□□□ -1.69
CD46-218ENST00000496723 PRC1O43663 620 aa4.52□□□□□ -1.69
CD46-218ENST00000496723 MOSPD3O75425 235 aa4.52□□□□□ -1.69
CD46-218ENST00000496723 KRT18P05783 430 aaKnown RBP4.52□□□□□ -1.69
CD46-218ENST00000496723 MYL3P08590 195 aa4.52□□□□□ -1.69
CD46-218ENST00000496723 NHLRC4P0CG21 123 aaPredicted RBP4.52□□□□□ -1.69
CD46-218ENST00000496723 PHKG2P15735 406 aa4.52□□□□□ -1.69
CD46-218ENST00000496723 TSHRP16473 764 aa4.52□□□□□ -1.69
CD46-218ENST00000496723 NTSR1P30989 418 aa4.52□□□□□ -1.69
CD46-218ENST00000496723 STT3AP46977 705 aa4.52□□□□□ -1.69
CD46-218ENST00000496723 CASP5P51878 434 aa4.52□□□□□ -1.69
CD46-218ENST00000496723 PROSER3Q2NL68 480 aa4.52□□□□□ -1.69
CD46-218ENST00000496723 RNASE12Q5GAN4 147 aaKnown RBP4.52□□□□□ -1.69
CD46-218ENST00000496723 MANEALQ5VSG8 457 aa4.52□□□□□ -1.69
CD46-218ENST00000496723 PRAMEF17Q5VTA0 474 aa4.52□□□□□ -1.69
CD46-218ENST00000496723 MZT2AQ6P582 158 aa4.52□□□□□ -1.69
CD46-218ENST00000496723 KIRREL2Q6UWL6 708 aa4.52□□□□□ -1.69
CD46-218ENST00000496723 TRIM72Q6ZMU5 477 aa4.52□□□□□ -1.69
CD46-218ENST00000496723 ZNF782Q6ZMW2 699 aaPredicted RBP4.52□□□□□ -1.69
CD46-218ENST00000496723 C11orf44Q8N8P7 122 aa4.52□□□□□ -1.69
CD46-218ENST00000496723 TERB1Q8NA31 727 aa4.52□□□□□ -1.69
CD46-218ENST00000496723 DAZAP1Q96EP5 407 aaKnown RBP4.52□□□□□ -1.69
CD46-218ENST00000496723 LRRC46Q96FV0 321 aa4.52□□□□□ -1.69
CD46-218ENST00000496723 ZNF668Q96K58 619 aaPredicted RBP4.52□□□□□ -1.69
CD46-218ENST00000496723 HIST1H2AAQ96QV6 131 aa4.52□□□□□ -1.69
CD46-218ENST00000496723 CIPCQ9C0C6 399 aa4.52□□□□□ -1.69
CD46-218ENST00000496723 AS3MTQ9HBK9 375 aa4.52□□□□□ -1.69
CD46-218ENST00000496723 DNAJB11Q9UBS4 358 aa4.52□□□□□ -1.69
CD46-218ENST00000496723 LPAR3Q9UBY5 353 aa4.52□□□□□ -1.69
CD46-218ENST00000496723 CAPN11Q9UMQ6 739 aa4.52□□□□□ -1.69
CD46-218ENST00000496723 HPSEQ9Y251 543 aa4.52□□□□□ -1.69
CD46-218ENST00000496723 ZNF521Q96K83 1311 aa4.51□□□□□ -1.69
CD46-218ENST00000496723 TRIM38O00635 465 aa4.51□□□□□ -1.69
CD46-218ENST00000496723 SNX2O60749 519 aa4.51□□□□□ -1.69
CD46-218ENST00000496723 FGAP02671 866 aa4.51□□□□□ -1.69
CD46-218ENST00000496723 MYCLP12524 364 aaPredicted RBP4.51□□□□□ -1.69
CD46-218ENST00000496723 CREB1P16220 341 aa4.51□□□□□ -1.69
CD46-218ENST00000496723 TBX4P57082 545 aa4.51□□□□□ -1.69
CD46-218ENST00000496723 PSG6Q00889 435 aa4.51□□□□□ -1.69
CD46-218ENST00000496723 PTCHD4Q6ZW05 846 aa4.51□□□□□ -1.69
CD46-218ENST00000496723 RNF152Q8N8N0 203 aa4.51□□□□□ -1.69
CD46-218ENST00000496723 CTHRC1Q96CG8 243 aa4.51□□□□□ -1.69
CD46-218ENST00000496723 ZNF48Q96MX3 618 aaPredicted RBP4.51□□□□□ -1.69
CD46-218ENST00000496723 SNX18Q96RF0 628 aa4.51□□□□□ -1.69
CD46-218ENST00000496723 HEYLQ9NQ87 328 aaPredicted RBP4.51□□□□□ -1.69
CD46-218ENST00000496723 GJB4Q9NTQ9 266 aa4.51□□□□□ -1.69
CD46-218ENST00000496723 TFCP2L1Q9NZI6 479 aa4.51□□□□□ -1.69
CD46-218ENST00000496723 M0R3H8 397 aa4.5□□□□□ -1.69
CD46-218ENST00000496723 APOL1O14791 398 aa4.5□□□□□ -1.69
CD46-218ENST00000496723 AREL1O15033 823 aa4.5□□□□□ -1.69
CD46-218ENST00000496723 SPRY2O43597 315 aa4.5□□□□□ -1.69
CD46-218ENST00000496723 NBPF7P0C2Y1 421 aaPredicted RBP4.5□□□□□ -1.69
CD46-218ENST00000496723 CD19P15391 556 aa4.5□□□□□ -1.69
CD46-218ENST00000496723 FGFR2P21802 821 aa4.5□□□□□ -1.69
CD46-218ENST00000496723 YY1P25490 414 aa4.5□□□□□ -1.69
CD46-218ENST00000496723 RENBPP51606 427 aa4.5□□□□□ -1.69
CD46-218ENST00000496723 ALDH5A1P51649 535 aaPredicted RBP4.5□□□□□ -1.69
CD46-218ENST00000496723 KLF9Q13886 244 aaPredicted RBP4.5□□□□□ -1.69
CD46-218ENST00000496723 CLEC9AQ6UXN8 241 aa4.5□□□□□ -1.69
CD46-218ENST00000496723 SERPINA13PQ6UXR4 307 aa4.5□□□□□ -1.69
CD46-218ENST00000496723 USP49Q70CQ1 688 aa4.5□□□□□ -1.69
CD46-218ENST00000496723 SFTPA1Q8IWL2 248 aa4.5□□□□□ -1.69
CD46-218ENST00000496723 METTL25Q8N6Q8 603 aa4.5□□□□□ -1.69
CD46-218ENST00000496723 PNLDC1Q8NA58 520 aaKnown RBP4.5□□□□□ -1.69
CD46-218ENST00000496723 DENND1AQ8TEH3 1009 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms