RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 C16orf87Q6PH81 154 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 PRUNE1Q86TP1 453 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 ALYREFQ86V81 257 aaKnown RBP9.41□□□□□ -0.9
HPS4-217ENST00000496385 FBXO27Q8NI29 283 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 HM13Q8TCT9 377 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 MZB1Q8WU39 189 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 FAM151AQ8WW52 585 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 DYNLL2Q96FJ2 89 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 OTUD5Q96G74 571 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 KCNK16Q96T55 309 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 SH3GL1Q99961 368 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 NUDT12Q9BQG2 462 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 FGFBP2Q9BYJ0 223 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 VPS37BQ9H9H4 285 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 MKNK2Q9HBH9 465 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 SCINQ9Y6U3 715 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 WDR91A4D1P6 747 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 USP17L12C9JPN9 530 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 USP17L21D6R901 530 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 NDUFB5O43674 189 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 LDHAP00338 332 aaKnown RBP9.41□□□□□ -0.9
HPS4-217ENST00000496385 FUCA1P04066 466 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 PABPC1P11940 636 aaKnown RBP9.41□□□□□ -0.9
HPS4-217ENST00000496385 SLC18A2Q05940 514 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 MOGQ16653 247 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 SPOPLQ6IQ16 392 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 DRICH1Q6PGQ1 229 aaPredicted RBP9.41□□□□□ -0.9
HPS4-217ENST00000496385 CYP2U1Q7Z449 544 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 GPBP1Q86WP2 473 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 SLC25A41Q8N5S1 370 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 MINDY2Q8NBR6 621 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 SLC44A5Q8NCS7 719 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 ZNF420Q8TAQ5 688 aaPredicted RBP9.41□□□□□ -0.9
HPS4-217ENST00000496385 APOPT1Q96IL0 206 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 CTRCQ99895 268 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 OSBPL10Q9BXB5 764 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 HIPK3Q9H422 1215 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 FAM96AQ9H5X1 160 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 C10orf88Q9H8K7 445 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 RABGEF1Q9UJ41 708 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 POMPQ9Y244 141 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 SF3B1O75533 1304 aaKnown RBP eCLIP9.41□□□□□ -0.9
HPS4-217ENST00000496385 FAM237BA0A1B0GVD1 139 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 POTEMA6NI47 508 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 TMEM114B3SHH9 223 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 LPXNO60711 386 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 SULT1C4O75897 302 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 MYL4P12829 197 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 TKTP29401 623 aaKnown RBP9.41□□□□□ -0.9
HPS4-217ENST00000496385 ESRRGP62508 458 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 WASHC5Q12768 1159 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 FSTL1Q12841 308 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 SMUG1Q53HV7 270 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 METTL21CQ5VZV1 264 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 FAM83AQ86UY5 434 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 LRRC49Q8IUZ0 686 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 PCYOX1LQ8NBM8 494 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 APBB2Q92870 758 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 PWWP2AQ96N64 755 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 ANO3Q9BYT9 981 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 PAIP1Q9H074 479 aaKnown RBP9.41□□□□□ -0.9
HPS4-217ENST00000496385 CDH22Q9UJ99 828 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 SHOC2Q9UQ13 582 aa9.41□□□□□ -0.9
HPS4-217ENST00000496385 IQANK1A0A1B0GTG1 560 aa9.4□□□□□ -0.9
HPS4-217ENST00000496385 NMT2O60551 498 aa9.4□□□□□ -0.9
HPS4-217ENST00000496385 C6orf222P0C671 652 aaPredicted RBP9.4□□□□□ -0.9
HPS4-217ENST00000496385 DLG4P78352 724 aa9.4□□□□□ -0.9
HPS4-217ENST00000496385 TXNL4AP83876 142 aaKnown RBP9.4□□□□□ -0.9
HPS4-217ENST00000496385 PDIA2Q13087 525 aaKnown RBP9.4□□□□□ -0.9
HPS4-217ENST00000496385 SPCS2Q15005 226 aa9.4□□□□□ -0.9
HPS4-217ENST00000496385 TRIP13Q15645 432 aaPredicted RBP9.4□□□□□ -0.9
HPS4-217ENST00000496385 IYDQ6PHW0 289 aa9.4□□□□□ -0.9
HPS4-217ENST00000496385 PALB2Q86YC2 1186 aa9.4□□□□□ -0.9
HPS4-217ENST00000496385 FBXW8Q8N3Y1 598 aa9.4□□□□□ -0.9
HPS4-217ENST00000496385 ADAMTS16Q8TE57 1224 aa9.4□□□□□ -0.9
HPS4-217ENST00000496385 TRUB1Q8WWH5 349 aaKnown RBP9.4□□□□□ -0.9
HPS4-217ENST00000496385 CNBD2Q96M20 576 aa9.4□□□□□ -0.9
HPS4-217ENST00000496385 INTS2Q9H0H0 1204 aaKnown RBP9.4□□□□□ -0.9
HPS4-217ENST00000496385 ACSS3Q9H6R3 686 aa9.4□□□□□ -0.9
HPS4-217ENST00000496385 CLK4Q9HAZ1 481 aaKnown RBP9.4□□□□□ -0.9
HPS4-217ENST00000496385 GBA2Q9HCG7 927 aaPredicted RBP9.4□□□□□ -0.9
HPS4-217ENST00000496385 VTA1Q9NP79 307 aa9.4□□□□□ -0.9
HPS4-217ENST00000496385 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.4□□□□□ -0.91
HPS4-217ENST00000496385 K7EPI3 171 aa9.4□□□□□ -0.91
HPS4-217ENST00000496385 KPNA4O00629 521 aaPredicted RBP9.4□□□□□ -0.91
HPS4-217ENST00000496385 CYP26A1O43174 497 aa9.4□□□□□ -0.91
HPS4-217ENST00000496385 SIN3BO75182 1162 aa9.4□□□□□ -0.91
HPS4-217ENST00000496385 ENTPD3O75355 529 aa9.4□□□□□ -0.91
HPS4-217ENST00000496385 H6PDO95479 791 aa9.4□□□□□ -0.91
HPS4-217ENST00000496385 MT-ND3P03897 115 aa9.4□□□□□ -0.91
HPS4-217ENST00000496385 KRT18P05783 430 aaKnown RBP9.4□□□□□ -0.91
HPS4-217ENST00000496385 INHBBP09529 407 aa9.4□□□□□ -0.91
HPS4-217ENST00000496385 PSMC3P17980 439 aa9.4□□□□□ -0.91
HPS4-217ENST00000496385 GSSP48637 474 aa9.4□□□□□ -0.91
HPS4-217ENST00000496385 COPAP53621 1224 aa9.4□□□□□ -0.91
HPS4-217ENST00000496385 PSMC1P62191 440 aaKnown RBP9.4□□□□□ -0.91
HPS4-217ENST00000496385 KLF1Q13351 362 aaPredicted RBP9.4□□□□□ -0.91
HPS4-217ENST00000496385 ADGRE1Q14246 886 aa9.4□□□□□ -0.91
HPS4-217ENST00000496385 PSMD6Q15008 389 aa9.4□□□□□ -0.91
HPS4-217ENST00000496385 RGS21Q2M5E4 152 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms